BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0209.p (160 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IP18.1 D8IP18_HERSS Isoquinoline 1-oxidoreductase (Alpha subun... 325 2e-87 Q88FX9.1 Q88FX9_PSEPK NdhS 222 1e-56 B0KLU5.1 B0KLU5_PSEPG (2Fe-2S)-binding domain protein 218 2e-55 A5W1M8.1 A5W1M8_PSEP1 (2Fe-2S)-binding domain protein 218 2e-55 E4RG30.1 E4RG30_PSEPB 2Fe-2S iron-sulfur cluster binding domain-... 216 8e-55 Q0KD54.1 Q0KD54_CUPNH Aerobic-type carbon monoxide dehydrogenase... 212 1e-53 A8GE75.1 A8GE75_SERP5 (2Fe-2S)-binding domain protein 210 6e-53 D1RQQ5.1 D1RQQ5_SEROD 2Fe-2S iron-sulfur cluster binding domain-... 210 7e-53 Q46YA6.1 Q46YA6_CUPPJ Ferredoxin:(2Fe-2S)-binding 209 1e-52 B3R3F0.1 B3R3F0_CUPTR Putative ISOQUINOLINE 1-OXIDOREDUCTASE (Io... 208 2e-52 >D8IP18.1 D8IP18_HERSS Isoquinoline 1-oxidoreductase (Alpha subunit) oxidoreductase protein EC=1.3.99.16 Length = 160 Score = 325 bits (832), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 160/160 (100%), Positives = 160/160 (100%) Query: 1 MHKQEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAA 60 MHKQEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAA Sbjct: 1 MHKQEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAA 60 Query: 61 RSCVIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRS 120 RSCVIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRS Sbjct: 61 RSCVIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRS 120 Query: 121 PTPSEDEIRHELDFNLCRCGTHVEILRAALRAVELQRGRQ 160 PTPSEDEIRHELDFNLCRCGTHVEILRAALRAVELQRGRQ Sbjct: 121 PTPSEDEIRHELDFNLCRCGTHVEILRAALRAVELQRGRQ 160 >Q88FX9.1 Q88FX9_PSEPK NdhS Length = 157 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/154 (69%), Positives = 122/154 (79%) Query: 4 QEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAARSC 63 Q I+ VNG PV + D PLL +LRNDLCLNGPK+GCGLGECGACTV++DGVAARSC Sbjct: 2 QTTISLQVNGQPVEVSAMPDTPLLLILRNDLCLNGPKYGCGLGECGACTVIIDGVAARSC 61 Query: 64 VIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRSPTP 123 VIPLAG A R++TTL+GL PVQQAFIDEQ AQCGYC+NGMIMT KALL R P P Sbjct: 62 VIPLAGAAGRNITTLEGLGSKAAPHPVQQAFIDEQAAQCGYCMNGMIMTAKALLDRIPEP 121 Query: 124 SEDEIRHELDFNLCRCGTHVEILRAALRAVELQR 157 S+++IR+EL NLCRCGTHVEILRA RA E +R Sbjct: 122 SDEQIRNELSANLCRCGTHVEILRAVRRAAETRR 155 >B0KLU5.1 B0KLU5_PSEPG (2Fe-2S)-binding domain protein Length = 157 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 105/154 (68%), Positives = 121/154 (78%) Query: 4 QEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAARSC 63 Q I+ +NG PV + D PLL +LRNDLCLNGPK+GCGLGECGACTV++DGVAARSC Sbjct: 2 QTTISLRINGQPVDVSAMPDTPLLLILRNDLCLNGPKYGCGLGECGACTVIIDGVAARSC 61 Query: 64 VIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRSPTP 123 VIPLAG A R +TTL+GL PVQQAFIDEQ AQCGYC+NGMIMT KALL R P P Sbjct: 62 VIPLAGAAGRDITTLEGLGNKAAPHPVQQAFIDEQAAQCGYCMNGMIMTAKALLDRIPDP 121 Query: 124 SEDEIRHELDFNLCRCGTHVEILRAALRAVELQR 157 ++++IR+EL NLCRCGTHVEILRA RA E +R Sbjct: 122 TDEQIRNELSGNLCRCGTHVEILRAVRRAAETRR 155 >A5W1M8.1 A5W1M8_PSEP1 (2Fe-2S)-binding domain protein Length = 157 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/154 (68%), Positives = 120/154 (77%) Query: 4 QEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAARSC 63 Q I+ VNG PV + D PLL +LRNDL LNGPK+GCGLGECGACTV++DGVAARSC Sbjct: 2 QTTISLQVNGQPVEVSAMPDTPLLLILRNDLSLNGPKYGCGLGECGACTVIIDGVAARSC 61 Query: 64 VIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRSPTP 123 VIPLAG A R +TTL+GL PVQQAFIDEQ AQCGYC+NGMIMT KALL R P P Sbjct: 62 VIPLAGAAGRDITTLEGLGSKAAPHPVQQAFIDEQAAQCGYCMNGMIMTAKALLDRIPEP 121 Query: 124 SEDEIRHELDFNLCRCGTHVEILRAALRAVELQR 157 S+++IR+EL NLCRCGTHVEILRA RA E +R Sbjct: 122 SDEQIRNELSGNLCRCGTHVEILRAVRRAAETRR 155 >E4RG30.1 E4RG30_PSEPB 2Fe-2S iron-sulfur cluster binding domain-containing protein EC=1.3.99.16 Length = 157 Score = 216 bits (550), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 106/154 (68%), Positives = 120/154 (77%) Query: 4 QEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAARSC 63 Q I+ VNG PV + D PLL +LRNDLCLNGPK+GCGLGECGACTV++DGVAARSC Sbjct: 2 QITISLQVNGQPVEVSAMPDTPLLLILRNDLCLNGPKYGCGLGECGACTVIIDGVAARSC 61 Query: 64 VIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRSPTP 123 VIPLAG A R +TTL+GL PVQQAFIDEQ AQCGYC+NGMIMT KALL R P Sbjct: 62 VIPLAGAAGRDITTLEGLGSKAAPHPVQQAFIDEQAAQCGYCMNGMIMTAKALLDRITDP 121 Query: 124 SEDEIRHELDFNLCRCGTHVEILRAALRAVELQR 157 S+++IR+EL NLCRCGTHVEILRA RA E +R Sbjct: 122 SDEQIRNELSGNLCRCGTHVEILRAVRRAAETRR 155 >Q0KD54.1 Q0KD54_CUPNH Aerobic-type carbon monoxide dehydrogenase homolog, small subunit Length = 176 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 102/157 (64%), Positives = 119/157 (75%) Query: 1 MHKQEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAA 60 M+ P+T VN +L +A D PLL +LRNDLC NGPK+GCGLG+CGACTVLVDG+ A Sbjct: 12 MNTPRPLTLQVNHAEHTLSVAPDTPLLYILRNDLCCNGPKYGCGLGQCGACTVLVDGMPA 71 Query: 61 RSCVIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRS 120 R+CV+P+ V VTTL+GL D + DPVQQAFIDEQ AQCGYCLNGMIMT KALL ++ Sbjct: 72 RACVLPVRAVVGHAVTTLEGLGTDAQPDPVQQAFIDEQAAQCGYCLNGMIMTAKALLAQN 131 Query: 121 PTPSEDEIRHELDFNLCRCGTHVEILRAALRAVELQR 157 P P E +IR L FNLCRCGTHVEI+RA RA LQR Sbjct: 132 PDPDEAQIREALRFNLCRCGTHVEIVRAVQRAAMLQR 168 >A8GE75.1 A8GE75_SERP5 (2Fe-2S)-binding domain protein Length = 180 Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 104/157 (66%), Positives = 120/157 (76%) Query: 4 QEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAARSC 63 + P+ VNG + + AD PLL VLRNDL LNGPK+GCGLGECGACTVLVDG+AARSC Sbjct: 19 EHPLMLSVNGENIHTRVMADTPLLLVLRNDLALNGPKYGCGLGECGACTVLVDGIAARSC 78 Query: 64 VIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRSPTP 123 VIP G+ R VTTL+GL RL PVQ+AFI+EQ AQCGYCLNGMIMT KALL R+P+P Sbjct: 79 VIPALGMTGRVVTTLEGLGDRDRLHPVQRAFIEEQAAQCGYCLNGMIMTTKALLDRNPSP 138 Query: 124 SEDEIRHELDFNLCRCGTHVEILRAALRAVELQRGRQ 160 S+ EIR L NLCRCGTH+EILRA RA+ L R + Sbjct: 139 SDREIRQALSGNLCRCGTHIEILRAVQRAIILCRSEE 175 >D1RQQ5.1 D1RQQ5_SEROD 2Fe-2S iron-sulfur cluster binding domain-containing protein Length = 179 Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 102/157 (64%), Positives = 120/157 (76%) Query: 4 QEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAARSC 63 + P+ VNG + + D PLL VLRNDL LNGPK+GCGLGECGACTVL+DG+AARSC Sbjct: 19 EHPLLLSVNGKSIHTQVMTDTPLLLVLRNDLALNGPKYGCGLGECGACTVLIDGIAARSC 78 Query: 64 VIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRSPTP 123 VIP GVA R +TTL+GL + L PVQ+AFI+EQ AQCGYCLNGMIMT KALL R+P+P Sbjct: 79 VIPALGVADRAITTLEGLGERDHLHPVQRAFIEEQAAQCGYCLNGMIMTTKALLDRNPSP 138 Query: 124 SEDEIRHELDFNLCRCGTHVEILRAALRAVELQRGRQ 160 S+ EIR L NLCRCGTH+EILRA RA+ L R + Sbjct: 139 SDGEIRQALSGNLCRCGTHIEILRAVQRAIILCRNEE 175 >Q46YA6.1 Q46YA6_CUPPJ Ferredoxin:(2Fe-2S)-binding Length = 176 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 104/157 (66%), Positives = 117/157 (74%) Query: 1 MHKQEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAA 60 M+ P+T HVN +L +A D PLL +LRNDL NGPK+GCGLG+CGACTVLVDG AA Sbjct: 12 MNAPRPLTLHVNHAEHTLCVAPDTPLLYILRNDLACNGPKYGCGLGQCGACTVLVDGTAA 71 Query: 61 RSCVIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRS 120 RSCV+P+ V VTTL+GL + DPVQQAFIDEQ AQCGYCLNGMIMT KALL + Sbjct: 72 RSCVLPVKAVVGHAVTTLEGLGTAAQADPVQQAFIDEQAAQCGYCLNGMIMTAKALLADN 131 Query: 121 PTPSEDEIRHELDFNLCRCGTHVEILRAALRAVELQR 157 P PSE EI L FNLCRCGTHVEI+RA RA LQR Sbjct: 132 PDPSEAEILEALRFNLCRCGTHVEIVRAVQRAAVLQR 168 >B3R3F0.1 B3R3F0_CUPTR Putative ISOQUINOLINE 1-OXIDOREDUCTASE (IorA) EC=1.3.99.16 Length = 176 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 101/157 (64%), Positives = 117/157 (74%) Query: 1 MHKQEPITFHVNGVPVSLDIAADAPLLNVLRNDLCLNGPKFGCGLGECGACTVLVDGVAA 60 M+ P+T VN +LD+A D PLL +LRNDLC NGPK+GCGLG+CGACTVLVDG+ A Sbjct: 12 MNTPRPLTLQVNHAQHTLDVAPDTPLLYILRNDLCCNGPKYGCGLGQCGACTVLVDGLPA 71 Query: 61 RSCVIPLAGVAARHVTTLDGLEQDGRLDPVQQAFIDEQGAQCGYCLNGMIMTIKALLLRS 120 RSCV+P+ VTTL+GL DPVQQAFI+EQ AQCGYCLNGMI+T KALL R+ Sbjct: 72 RSCVLPVKAAVGHAVTTLEGLGTAQHPDPVQQAFIEEQAAQCGYCLNGMILTAKALLARN 131 Query: 121 PTPSEDEIRHELDFNLCRCGTHVEILRAALRAVELQR 157 P P E +IR L FNLCRCGTHVEI+RA RA LQR Sbjct: 132 PDPDEAQIREALRFNLCRCGTHVEIVRAVRRAAVLQR 168