BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0208.p (251 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IP19.1 D8IP19_HERSS Maleate cis-trans isomerase protein EC=5.2... 506 e-141 Q46UP0.1 Q46UP0_CUPPJ Asp/Glu racemase 450 e-125 D4XBF5.1 D4XBF5_9BURK Maleate cis-trans isomerase EC=5.2.1.1 450 e-125 Q46YA8.1 Q46YA8_CUPPJ Asp/Glu racemase 447 e-124 Q0KD52.1 Q0KD52_CUPNH Maleate cis-trans isomerase EC=5.2.1.1 445 e-123 B3R3F2.1 B3R3F2_CUPTR Putative MALEATE CIS-TRANS ISOMERASE EC=5.... 444 e-123 Q0K321.1 Q0K321_CUPNH Maleate cis-trans isomerase EC=5.2.1.1 441 e-122 Q13IF1.1 Q13IF1_BURXL Putative cis-trans isomerase 437 e-121 Q2KW57.1 Q2KW57_BORA1 Maleate cis-trans isomerase EC=5.2.1.1 432 e-119 F2LD86.1 F2LD86_BURGA Asp/Glu racemase 428 e-118 >D8IP19.1 D8IP19_HERSS Maleate cis-trans isomerase protein EC=5.2.1.1 Length = 251 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 250/251 (99%), Positives = 251/251 (100%) Query: 1 MQQRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDG 60 MQQRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDG Sbjct: 1 MQQRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDG 60 Query: 61 ESDRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGAL 120 ESDRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGAL Sbjct: 61 ESDRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGAL 120 Query: 121 IDALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLP 180 IDALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLP Sbjct: 121 IDALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLP 180 Query: 181 AIVAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIV 240 AIVAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLEL+RIV Sbjct: 181 AIVAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELDRIV 240 Query: 241 PGAGALLSGAY 251 PGAGALLSGAY Sbjct: 241 PGAGALLSGAY 251 >Q46UP0.1 Q46UP0_CUPPJ Asp/Glu racemase Length = 250 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 216/249 (86%), Positives = 235/249 (94%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAMLTARQ IRPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLTARQQIRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR+SEQRL AHT NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRKSEQRLKAHTTENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKVIGAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPA+LPAI Sbjct: 122 ALKVIGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPAKLPAI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+ + VDAIVLSACVQMPSLP +A+VEAMTGKPVITAA+ATTYAML+ L+LE +VPG Sbjct: 182 VAQMNIADVDAIVLSACVQMPSLPAVAKVEAMTGKPVITAAIATTYAMLRALDLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >D4XBF5.1 D4XBF5_9BURK Maleate cis-trans isomerase EC=5.2.1.1 Length = 250 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 220/249 (88%), Positives = 234/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+ +RIGQIVPSSNTTMETEIPAML ARQ IRPERFTFHSSRMRMKKVVKEELAAMDGES Sbjct: 2 QKPFRIGQIVPSSNTTMETEIPAMLLARQQIRPERFTFHSSRMRMKKVVKEELAAMDGES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SE+RL AHTAANGADAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRVSEKRLQAHTAANGADAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKVIGA++IVVVAPYMKPLTELVVDYIR+EG+EV+DYRALEIPDNLDV RHDP+RLP I Sbjct: 122 ALKVIGARRIVVVAPYMKPLTELVVDYIRNEGFEVVDYRALEIPDNLDVGRHDPSRLPEI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQMDT VDAIVLSACVQMPSLP IA+VEA TGKPVITAAVATTYA+LK L LE +VPG Sbjct: 182 VAQMDTRDVDAIVLSACVQMPSLPAIAKVEAQTGKPVITAAVATTYAILKSLNLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >Q46YA8.1 Q46YA8_CUPPJ Asp/Glu racemase Length = 250 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 215/249 (86%), Positives = 233/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAMLTARQ IRPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLTARQQIRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SEQRL AHT NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRTSEQRLKAHTTENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKVIGAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPA+LP I Sbjct: 122 ALKVIGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPAKLPGI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+ + VDAIVLSACVQMPSLP +A+VEAMTGKPVITAA+ATTYAML+ L+LE +VPG Sbjct: 182 VAQMNIADVDAIVLSACVQMPSLPAVAKVEAMTGKPVITAAIATTYAMLRALDLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >Q0KD52.1 Q0KD52_CUPNH Maleate cis-trans isomerase EC=5.2.1.1 Length = 250 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 214/249 (85%), Positives = 232/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAML ARQ +RPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLAARQLVRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SEQRL AHTA NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRVSEQRLQAHTAENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKV+GAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPARLP I Sbjct: 122 ALKVMGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPARLPEI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+T+ D IVLSACVQMPSLP +A+VEAMTGKPV+TAAVATTYA+LKRL LE +VPG Sbjct: 182 VAQMNTADADVIVLSACVQMPSLPAVAKVEAMTGKPVVTAAVATTYALLKRLGLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >B3R3F2.1 B3R3F2_CUPTR Putative MALEATE CIS-TRANS ISOMERASE EC=5.2.1.1 Length = 250 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 214/249 (85%), Positives = 232/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAML ARQ +RPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLAARQLVRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SEQRL AHTA NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRVSEQRLQAHTAENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKV+GAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPA+LP I Sbjct: 122 ALKVMGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPAKLPEI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+T+ D IVLSACVQMPSLP IA+VEAMTGKPV+TAAVATTYA+LKRL LE +VPG Sbjct: 182 VAQMNTADADVIVLSACVQMPSLPAIAKVEAMTGKPVVTAAVATTYALLKRLGLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >Q0K321.1 Q0K321_CUPNH Maleate cis-trans isomerase EC=5.2.1.1 Length = 250 Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust. Identities = 211/249 (84%), Positives = 232/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAML ARQ IRPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLLARQQIRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR+SEQRL HT NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRKSEQRLKVHTIENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 AL+VIGA++I VVAPY+KPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPARLP I Sbjct: 122 ALRVIGARRIAVVAPYLKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPARLPGI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 V+QM+ + VDAIVLSACVQMPSLP +A+VEAMTGKPVITAA+ATTYAMLK L+LE +VPG Sbjct: 182 VSQMNLADVDAIVLSACVQMPSLPAVAKVEAMTGKPVITAAIATTYAMLKALDLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >Q13IF1.1 Q13IF1_BURXL Putative cis-trans isomerase Length = 251 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 216/251 (86%), Positives = 227/251 (90%) Query: 1 MQQRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDG 60 M + +YRIGQIVPSSNTTMETEIPAML ARQ IRPERFTFHSSRMRMKKV K ELAAMD Sbjct: 1 MSKNIYRIGQIVPSSNTTMETEIPAMLLARQQIRPERFTFHSSRMRMKKVEKSELAAMDA 60 Query: 61 ESDRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGAL 120 ESDRCAVELSDARVDVLGYACLVAIMAMG GYHRQSEQRL AHTA NGADAPVVTSAGAL Sbjct: 61 ESDRCAVELSDARVDVLGYACLVAIMAMGHGYHRQSEQRLKAHTAENGADAPVVTSAGAL 120 Query: 121 IDALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLP 180 +DAL VIGAK++ VVAPYMKPLT+LVVDYI +EGYEV DYRALEI DNL+V RHDP+RLP Sbjct: 121 VDALGVIGAKRVAVVAPYMKPLTKLVVDYIGNEGYEVCDYRALEIQDNLEVGRHDPSRLP 180 Query: 181 AIVAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIV 240 IVA MDT VDAIVLSACVQMPSLPV+AQVEAMT KPV+TAAVATTYAMLK L LERIV Sbjct: 181 EIVAGMDTRGVDAIVLSACVQMPSLPVVAQVEAMTRKPVVTAAVATTYAMLKALGLERIV 240 Query: 241 PGAGALLSGAY 251 PGAG LLSGAY Sbjct: 241 PGAGTLLSGAY 251 >Q2KW57.1 Q2KW57_BORA1 Maleate cis-trans isomerase EC=5.2.1.1 Length = 250 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 210/249 (84%), Positives = 227/249 (91%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+ YRIGQIVPSSNTTMETEIPAML ARQ IRPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKNYRIGQIVPSSNTTMETEIPAMLLARQQIRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCA+ELSDARVDVLGYACLVAIMAMG GYHRQS+ RLTAHTA+NG +APV+TSAGAL+D Sbjct: 62 DRCALELSDARVDVLGYACLVAIMAMGHGYHRQSQARLTAHTASNGGEAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKV+GA+KI VVAPYMKPLTELVV YI +EGYEV+DYRALEIPDNL+V RHDPARLP I Sbjct: 122 ALKVMGARKIAVVAPYMKPLTELVVSYIANEGYEVVDYRALEIPDNLEVGRHDPARLPEI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 V M+ D IVLSACVQMPSLP IA+VEA+TGKPV+TAAVATTYAMLK LELE +VPG Sbjct: 182 VLGMNYQDADVIVLSACVQMPSLPAIAKVEALTGKPVLTAAVATTYAMLKALELEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >F2LD86.1 F2LD86_BURGA Asp/Glu racemase Length = 250 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 209/248 (84%), Positives = 226/248 (91%) Query: 4 RLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGESD 63 R +RIGQIVPSSNTTMETEIPAML R+AIRPERFTFHSSRMRMKKVVKEELAAMD ESD Sbjct: 3 RTFRIGQIVPSSNTTMETEIPAMLRLREAIRPERFTFHSSRMRMKKVVKEELAAMDAESD 62 Query: 64 RCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALIDA 123 RCA+ELSDARVDVLGYACLVAIMAMGRGYHR S++RLT HTA NGA APV+TSAGAL+DA Sbjct: 63 RCALELSDARVDVLGYACLVAIMAMGRGYHRVSQERLTRHTAENGAKAPVLTSAGALVDA 122 Query: 124 LKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAIV 183 LKVIGAKKIVVVAPYMKPLTELVVDYI HEGYEV+ +RALEIPDNLDV RHDPARLP IV Sbjct: 123 LKVIGAKKIVVVAPYMKPLTELVVDYIGHEGYEVIAWRALEIPDNLDVGRHDPARLPEIV 182 Query: 184 AQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPGA 243 + DAIVLSACVQMPSLP +A+VEAMTGKPVITAA+ATTY++L+ L+LE IVPGA Sbjct: 183 KSLPYQDADAIVLSACVQMPSLPAVAKVEAMTGKPVITAAIATTYSILRELDLEPIVPGA 242 Query: 244 GALLSGAY 251 GALLSGAY Sbjct: 243 GALLSGAY 250