BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0093.p (283 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IU30.1 D8IU30_HERSS tRNA/rRNA methyltransferase protein EC=2.1... 516 e-144 F1W2S2.1 F1W2S2_9BURK RNA methyltransferase 358 4e-97 C3XAS1.1 C3XAS1_OXAFO RNA methyltransferase 338 6e-91 A4G4T6.1 A4G4T6_HERAR tRNA/rRNA methyltransferase SpoU-like 326 2e-87 A6SZN6.1 A6SZN6_JANMA RNA methyltransferase, TrmH family 324 1e-86 C3X4L3.1 C3X4L3_OXAFO RNA methyltransferase 312 3e-83 Q2SWY3.1 Q2SWY3_BURTA RNA methyltransferase, TrmH family 296 2e-78 Q39F58.1 Q39F58_BURS3 tRNA/rRNA methyltransferase (SpoU) 295 5e-78 Q1BHG7.1 Q1BHG7_BURCA tRNA/rRNA methyltransferase (SpoU) 292 4e-77 A0K8C8.1 A0K8C8_BURCH tRNA/rRNA methyltransferase (SpoU) 292 4e-77 >D8IU30.1 D8IU30_HERSS tRNA/rRNA methyltransferase protein EC=2.1.1.- Length = 263 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 260/263 (98%), Positives = 261/263 (99%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQ Sbjct: 1 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQY 60 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL Sbjct: 61 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 120 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 DGLQDPGNLGSILRSAAAAGVRQVFCSPGT AAWSPKVLRAGMGAHFVLDIVEDADLVAL Sbjct: 121 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTVAAWSPKVLRAGMGAHFVLDIVEDADLVAL 180 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQ+AATQEVVIPHLGQME Sbjct: 181 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQEAATQEVVIPHLGQME 240 Query: 261 SLNVAAAAAVCLFEQLRQRTAGR 283 SLNVAAAAAVCLFEQLRQRTAGR Sbjct: 241 SLNVAAAAAVCLFEQLRQRTAGR 263 >F1W2S2.1 F1W2S2_9BURK RNA methyltransferase Length = 262 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 175/262 (66%), Positives = 208/262 (79%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 MK I+S+DNPL+KELKQLA+SSQARR+AG++LLDGVHL +A+LQH G PQLCVV++SA Sbjct: 1 MKPISSRDNPLYKELKQLATSSQARRKAGRTLLDGVHLCEAYLQHLGMPQLCVVSQSATI 60 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 + EV P+L QCEA + QC+VL D LY A+S V++GVGL +V TP P AL SAVLL Sbjct: 61 NQEVVPLLLQCEAGRTQCIVLPDALYQAISQVEHGVGLMFVVETPQLVMPVALAGSAVLL 120 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 D LQDPGN+GSILRSAAAAG+ VFCSPGTA AWSPKVLRAGMGAHF+L I E+ DL + Sbjct: 121 DNLQDPGNMGSILRSAAAAGIEYVFCSPGTAFAWSPKVLRAGMGAHFLLKIFENVDLAEV 180 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 + +P+LATSSH AQ +YD DL+ PVAWL GHEGQGV L AT +V IPH+G ME Sbjct: 181 VRNASVPVLATSSHVAQRVYDIDLTQPVAWLFGHEGQGVEEQLLALATHQVAIPHIGAME 240 Query: 261 SLNVAAAAAVCLFEQLRQRTAG 282 SLNVAA AAVC FEQ+RQR+AG Sbjct: 241 SLNVAACAAVCFFEQVRQRSAG 262 >C3XAS1.1 C3XAS1_OXAFO RNA methyltransferase Length = 260 Score = 338 bits (866), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 157/258 (60%), Positives = 203/258 (78%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 MK +TSKDNP ++ELKQLASSS ARR++GQS+LDG+HL Q++L+H P LCVV+E++Q+ Sbjct: 1 MKSLTSKDNPQYRELKQLASSSAARRKSGQSVLDGIHLCQSYLEHIDVPLLCVVSEASQH 60 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 HPEVA I+ +CE +CL+L D L+ +S V+NG+ + L+ TPV LT++ VLL Sbjct: 61 HPEVAAIMGECERRGGECLLLTDSLFHPLSQVENGIDILFLIVTPVHEDCPELTQTGVLL 120 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 D +QDPGNLGSILRSAAAAG+RQVFCSPGTAA WSP+VLRAGMGAHF+L++ ED L L Sbjct: 121 DRIQDPGNLGSILRSAAAAGIRQVFCSPGTAAVWSPRVLRAGMGAHFLLEVFEDVSLEKL 180 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 ++IP++AT+ + +TIYD DL+ PVAWLLGHEG+GV L A+ ++VIPH+G ME Sbjct: 181 IETAKIPVIATTPYTKKTIYDFDLNRPVAWLLGHEGRGVDERLMVMASDKLVIPHMGAME 240 Query: 261 SLNVAAAAAVCLFEQLRQ 278 SLNVAA AAVC FEQ+RQ Sbjct: 241 SLNVAACAAVCFFEQVRQ 258 >A4G4T6.1 A4G4T6_HERAR tRNA/rRNA methyltransferase SpoU-like Length = 265 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 154/260 (59%), Positives = 203/260 (78%) Query: 22 KLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQNH 81 K+I+S+DNPL+KELK LA+SSQARR+AG++LLDG+HL +A+LQ G P LC+ +E+A + Sbjct: 4 KIISSRDNPLYKELKHLATSSQARRKAGRTLLDGIHLCEAYLQQVGLPPLCIASETALLN 63 Query: 82 PEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLLD 141 EV I+ QC QC+VL D L+ A+S V++GV + ++ TP + P+ L +SAVLLD Sbjct: 64 SEVTVIVQQCIHSHTQCIVLPDALFHALSQVEHGVDILFVIDTPELTEPQRLLQSAVLLD 123 Query: 142 GLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVALC 201 +QDPGN GSI+RSAAAAG++QVFCS GT AWSPKV+RAGMGAHF+++I E+ DL AL Sbjct: 124 RVQDPGNFGSIVRSAAAAGIKQVFCSAGTTFAWSPKVMRAGMGAHFLMEIFENVDLEALI 183 Query: 202 AASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQMES 261 A + IP++ATSSHA + +YD DL+ PVAWL GHEGQGV+ L AT ++ IPHLG +ES Sbjct: 184 ARADIPVIATSSHAEKRLYDLDLTQPVAWLFGHEGQGVTEHLLALATHQITIPHLGAIES 243 Query: 262 LNVAAAAAVCLFEQLRQRTA 281 LNVAA++AVC FEQ+RQ TA Sbjct: 244 LNVAASSAVCFFEQVRQITA 263 >A6SZN6.1 A6SZN6_JANMA RNA methyltransferase, TrmH family Length = 264 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 158/261 (60%), Positives = 198/261 (75%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 +K I+S+DNPL+KELK LA+SSQARR+AG++LLDGVHL +A+LQ G P LC+V E+A Sbjct: 3 IKSISSRDNPLYKELKHLAASSQARRKAGRTLLDGVHLCEAYLQKVGLPPLCIVGETAML 62 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 + EV I+ QC QC+VL D L+ A+S V++GV L ++ TP P LT+SAVLL Sbjct: 63 NGEVTVIVQQCSDSTTQCIVLPDALFHALSQVEHGVDLLFVIDTPEMPTPPRLTQSAVLL 122 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 D +QDPGN GSI+RSAAAAG++QVFCS GT AWSPKVLRAGMGAHF+L+I E DL L Sbjct: 123 DKVQDPGNFGSIVRSAAAAGIKQVFCSAGTTFAWSPKVLRAGMGAHFLLEIFEGVDLSDL 182 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 + IP++ATSSHA + +Y+ DL PVAWL GHEGQGV+ L AT + IPHLG +E Sbjct: 183 LGRADIPVIATSSHAEKQLYELDLRQPVAWLFGHEGQGVADDLLARATHRISIPHLGDIE 242 Query: 261 SLNVAAAAAVCLFEQLRQRTA 281 SLNVAA++AVC FEQLRQRT+ Sbjct: 243 SLNVAASSAVCFFEQLRQRTS 263 >C3X4L3.1 C3X4L3_OXAFO RNA methyltransferase Length = 271 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 147/259 (56%), Positives = 198/259 (76%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 MKL+TS+DNP +++L+QLAS+S A R+ ++LDG+HL QA+L H G P LCV ++++Q+ Sbjct: 1 MKLLTSRDNPQYRKLRQLASNSAASRKGEYAILDGIHLCQAYLGHVGIPVLCVASQTSQH 60 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 HPEV+ I+ +C++ A+CL+L D LY +S V+NGV + +++ P L ++AVLL Sbjct: 61 HPEVSAIVQECKSGGAKCLLLTDSLYRPISQVENGVDIVFVISKPAVQTCPVLRQTAVLL 120 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 D +QDPGNLGSILRSAAAAG+ +VFCS GTA+AWSP+VLRAGMGAHF+L+IVE+ L + Sbjct: 121 DRIQDPGNLGSILRSAAAAGIARVFCSAGTASAWSPRVLRAGMGAHFLLEIVENVVLEDV 180 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 AS IP++AT+ + TIYDCDL PVAWLLGHEG+G+ +L A+ VV+PH G ME Sbjct: 181 MEASEIPVIATTPYTETTIYDCDLRLPVAWLLGHEGKGIRESLLDKASDRVVVPHQGAME 240 Query: 261 SLNVAAAAAVCLFEQLRQR 279 SLNVAA AAVC FEQ+RQ Sbjct: 241 SLNVAACAAVCFFEQVRQN 259 >Q2SWY3.1 Q2SWY3_BURTA RNA methyltransferase, TrmH family Length = 281 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 152/261 (58%), Positives = 189/261 (72%), Gaps = 2/261 (0%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 MK ITS+DNPL+K LK LA S+ +RR GQ+LL+G+HLA A+L G P+LCVV + A + Sbjct: 20 MKAITSRDNPLYKRLKALAGSTHQQRRGGQALLEGLHLASAYLDAAGQPELCVVTDGALS 79 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 H E +A+ E A+ + L D L+ +S V NGVGL LLVA P + P+ ++ ++V+L Sbjct: 80 HAEARETVARIE--PARVVTLPDALFGQLSNVVNGVGLLLLVARPAPALPERVSNTSVVL 137 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 DG+QD GN+GSILRSAAAAGV+QVFC+PGTA AWS KVLR+ MGAHF+LDI ED D L Sbjct: 138 DGVQDAGNVGSILRSAAAAGVKQVFCAPGTAYAWSSKVLRSAMGAHFLLDIHEDVDAGTL 197 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 IP+ T SH A+ IYDCDL+GPVAW+ G+EG GVS + AAT V IP G ME Sbjct: 198 IERLAIPVALTDSHGARAIYDCDLTGPVAWVFGNEGAGVSVRWRDAATHRVTIPQPGGME 257 Query: 261 SLNVAAAAAVCLFEQLRQRTA 281 SLNVAAAAAVCLFEQ RQ+ A Sbjct: 258 SLNVAAAAAVCLFEQCRQQRA 278 >Q39F58.1 Q39F58_BURS3 tRNA/rRNA methyltransferase (SpoU) Length = 260 Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 152/259 (58%), Positives = 185/259 (71%), Gaps = 2/259 (0%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 MK ITS+DNPL+K LK LA S+ +RR GQ+LL+G HLA A+L P+LCV E A Sbjct: 1 MKSITSRDNPLYKRLKALAGSTSHQRRGGQALLEGFHLASAYLDTGATPELCVTTEGALG 60 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 H E I+A+ +A + + L D L+ +S V NGVG LLV PV P +T+S+V+L Sbjct: 61 HAEAQAIVARVDA--QRIVTLPDALFGQLSNVVNGVGFLLLVDRPVQPLPARVTQSSVVL 118 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 DG+QD GN+GSILRSAAAAGVR VFC+PGTA AWS KVLR+GMGAHF+L I ED + AL Sbjct: 119 DGVQDAGNVGSILRSAAAAGVRHVFCAPGTAYAWSSKVLRSGMGAHFLLSIHEDVEAGAL 178 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 +P+ T SH AQ +YDCDLSGPVAW+ G+EG GVSA + AAT V IP G ME Sbjct: 179 AERLDVPVALTDSHGAQAVYDCDLSGPVAWVFGNEGAGVSAFWRDAATHRVTIPQPGGME 238 Query: 261 SLNVAAAAAVCLFEQLRQR 279 SLNVAAAAAVCLFEQ+RQ+ Sbjct: 239 SLNVAAAAAVCLFEQVRQQ 257 >Q1BHG7.1 Q1BHG7_BURCA tRNA/rRNA methyltransferase (SpoU) Length = 260 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 150/259 (57%), Positives = 185/259 (71%), Gaps = 2/259 (0%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 MK ITS+DNPL+K LK LA S+ +RR+GQ+LL+G HLA A+L P+LCV E A Sbjct: 1 MKSITSRDNPLYKRLKALAGSTPHQRRSGQALLEGFHLASAYLDTGATPELCVTTEGALG 60 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 H E I+A+ +A + + L D L+ +S V NGVG LLV P P+ +T ++V+L Sbjct: 61 HAEAQAIVARIDA--QRIVTLPDALFGQLSNVVNGVGFLLLVDRPAHPLPERVTHTSVVL 118 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 DG+QD GN+GSILRSAAAAGVR VFC+PGTA AWS KVLR+GMGAHF+L I ED + AL Sbjct: 119 DGVQDAGNVGSILRSAAAAGVRHVFCAPGTAYAWSSKVLRSGMGAHFLLSIHEDVEAEAL 178 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 +P+ T SH AQ +YDCDLSGPVAW+ G+EG GVSA + AAT V IP G ME Sbjct: 179 AERLDVPVALTDSHGAQAVYDCDLSGPVAWVFGNEGAGVSAFWRDAATHRVTIPQPGGME 238 Query: 261 SLNVAAAAAVCLFEQLRQR 279 SLNVAAAAAVCLFEQ+RQ+ Sbjct: 239 SLNVAAAAAVCLFEQVRQQ 257 >A0K8C8.1 A0K8C8_BURCH tRNA/rRNA methyltransferase (SpoU) Length = 260 Score = 292 bits (747), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 150/259 (57%), Positives = 185/259 (71%), Gaps = 2/259 (0%) Query: 21 MKLITSKDNPLFKELKQLASSSQARRRAGQSLLDGVHLAQAWLQHRGAPQLCVVAESAQN 80 MK ITS+DNPL+K LK LA S+ +RR+GQ+LL+G HLA A+L P+LCV E A Sbjct: 1 MKSITSRDNPLYKRLKALAGSTPHQRRSGQALLEGFHLASAYLDTGATPELCVTTEGALG 60 Query: 81 HPEVAPILAQCEALQAQCLVLADKLYDAVSTVDNGVGLFLLVATPVASAPKALTESAVLL 140 H E I+A+ +A + + L D L+ +S V NGVG LLV P P+ +T ++V+L Sbjct: 61 HAEAQAIVARIDA--QRIVTLPDALFGQLSNVVNGVGFLLLVDRPAHPLPERVTHTSVVL 118 Query: 141 DGLQDPGNLGSILRSAAAAGVRQVFCSPGTAAAWSPKVLRAGMGAHFVLDIVEDADLVAL 200 DG+QD GN+GSILRSAAAAGVR VFC+PGTA AWS KVLR+GMGAHF+L I ED + AL Sbjct: 119 DGVQDAGNVGSILRSAAAAGVRHVFCAPGTAYAWSSKVLRSGMGAHFLLSIHEDVEAEAL 178 Query: 201 CAASRIPLLATSSHAAQTIYDCDLSGPVAWLLGHEGQGVSAALQQAATQEVVIPHLGQME 260 +P+ T SH AQ +YDCDLSGPVAW+ G+EG GVSA + AAT V IP G ME Sbjct: 179 AERLDVPVALTDSHGAQAVYDCDLSGPVAWVFGNEGAGVSAFWRDAATHRVTIPQPGGME 238 Query: 261 SLNVAAAAAVCLFEQLRQR 279 SLNVAAAAAVCLFEQ+RQ+ Sbjct: 239 SLNVAAAAAVCLFEQVRQQ 257