BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0025.p (258 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IU92.1 D8IU92_HERSS GntR family transcription regulator protein 523 e-146 D4XBL3.1 D4XBL3_9BURK GntR family transcriptional regulator 335 4e-90 E3HPU6.1 E3HPU6_ACHXA Bacterial regulatory protein, GntR family ... 333 2e-89 E5U6V7.1 E5U6V7_ALCXX GntR family Transcriptional regulator 318 6e-85 Q21SG5.1 Q21SG5_RHOFD Transcriptional regulator, GntR family 301 7e-80 F2IZJ8.1 F2IZJ8_9PROT GntR family transcription regulator protein 234 1e-59 C3KMP7.1 C3KMP7_RHISN Putative GntR family transcriptional regul... 144 1e-32 B8IX66.1 B8IX66_METNO GntR domain protein 144 2e-32 B8IND5.1 B8IND5_METNO GntR domain protein 142 4e-32 A9EGH7.1 A9EGH7_9RHOB Putative transcription regulator protein 142 5e-32 >D8IU92.1 D8IU92_HERSS GntR family transcription regulator protein Length = 258 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 256/258 (99%), Positives = 257/258 (99%) Query: 1 MPNTSKPARPGASSDILNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSEND 60 MPNTSKPAR GASSDILNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSEND Sbjct: 1 MPNTSKPARAGASSDILNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSEND 60 Query: 61 LATLFEVSRPVVRQALDRLREDQLVESLRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNG 120 LATLFEVSRPVVRQALDRLREDQLVESLRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNG Sbjct: 61 LATLFEVSRPVVRQALDRLREDQLVESLRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNG 120 Query: 121 LELRLVIEPECAAMAALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATG 180 LELRLVIEPECAAMAALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATG Sbjct: 121 LELRLVIEPECAAMAALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATG 180 Query: 181 NLRFVQVMKTLEYDVSHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAM 240 NLRFVQVMKTLEYDVSHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAM Sbjct: 181 NLRFVQVMKTLEYDVSHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAM 240 Query: 241 RGHIDNARTRMFNSRPGL 258 RGHI+NARTRMFNSRPGL Sbjct: 241 RGHIENARTRMFNSRPGL 258 >D4XBL3.1 D4XBL3_9BURK GntR family transcriptional regulator Length = 267 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 159/247 (64%), Positives = 196/247 (79%) Query: 8 ARPGASSDILNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSENDLATLFEV 67 +RP D+L A+GLG VR ERFAERVYE+LF+AI G+I G+KLP+E +LA LFEV Sbjct: 17 SRPRPELDVLADVASGLGYVRAERFAERVYESLFYAIATGKIAPGNKLPTELELAALFEV 76 Query: 68 SRPVVRQALDRLREDQLVESLRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNGLELRLVI 127 SRPVVRQALDRLREDQLV+S+RGSGTYV+ KP L P +P R+GHI+ GLELR+VI Sbjct: 77 SRPVVRQALDRLREDQLVDSIRGSGTYVRAKPDLMGGMPAVDPARRVGHILEGLELRMVI 136 Query: 128 EPECAAMAALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATGNLRFVQV 187 EPECA +AALRR+ DL M+R+L G+E A+ G IAHHYD+GFH AIA AT N RFVQV Sbjct: 137 EPECAYLAALRRSNDDLRDMDRMLTGYEEADASGAIAHHYDYGFHRAIAAATSNQRFVQV 196 Query: 188 MKTLEYDVSHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAMRGHIDNA 247 +K+LEYDVSHAVN++RHL+H PWKR++ A+DEHR I+ LI+ QDA+GAR MR HI+ A Sbjct: 197 LKSLEYDVSHAVNVMRHLVHSEPWKRTRAAIDEHRHIYRLIQEQDADGARNVMRAHIEKA 256 Query: 248 RTRMFNS 254 ++RM NS Sbjct: 257 KSRMLNS 263 >E3HPU6.1 E3HPU6_ACHXA Bacterial regulatory protein, GntR family protein 27 Length = 267 Score = 333 bits (853), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 159/246 (64%), Positives = 195/246 (79%) Query: 9 RPGASSDILNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSENDLATLFEVS 68 RP D+L A+GLG VR ERFAERVYE+LF+AI G+I GSKLP+E +LA LFEVS Sbjct: 18 RPRPELDVLAEVASGLGYVRAERFAERVYESLFYAIATGKIAPGSKLPTELELAALFEVS 77 Query: 69 RPVVRQALDRLREDQLVESLRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNGLELRLVIE 128 RPVVRQALDRLREDQLV+S+RGSG+YV+ KP L P +P R+GHI+ GLELR+VIE Sbjct: 78 RPVVRQALDRLREDQLVDSIRGSGSYVRAKPDLMGGMPAVDPARRVGHILEGLELRMVIE 137 Query: 129 PECAAMAALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATGNLRFVQVM 188 PECA +AALRR +DL M+R+L G+E A+ G IAHH+D+GFH AIA AT N RFVQV+ Sbjct: 138 PECAYLAALRRTDEDLRDMDRMLTGYEEADASGAIAHHHDYGFHRAIAAATSNQRFVQVL 197 Query: 189 KTLEYDVSHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAMRGHIDNAR 248 K+LEYDVSHAVN++RHL+H PWKR++ A++EHR I+ LI+ QDAEGAR MR HI+ AR Sbjct: 198 KSLEYDVSHAVNVMRHLVHSQPWKRTRAAIEEHRHIYRLIQEQDAEGARNVMRAHIEKAR 257 Query: 249 TRMFNS 254 +RM NS Sbjct: 258 SRMLNS 263 >E5U6V7.1 E5U6V7_ALCXX GntR family Transcriptional regulator Length = 267 Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 163/247 (65%), Positives = 197/247 (79%) Query: 8 ARPGASSDILNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSENDLATLFEV 67 +RP D+L A+GLG VR ERFAERVYE+LF+AI G+I G+KLP+E +LA LFEV Sbjct: 17 SRPRPELDVLAEVASGLGYVRAERFAERVYESLFYAIATGKIAPGAKLPTELELAALFEV 76 Query: 68 SRPVVRQALDRLREDQLVESLRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNGLELRLVI 127 SRPVVRQALDRLREDQLVES+RGSG+YV+ KP L +P R+GHI+ GLELR+VI Sbjct: 77 SRPVVRQALDRLREDQLVESMRGSGSYVRAKPDLMGGMSAVDPARRVGHILEGLELRMVI 136 Query: 128 EPECAAMAALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATGNLRFVQV 187 EPECA +AALRR DL M+R+L G+EAA+ G IAHH+D+GFH AIA ATGN RFVQV Sbjct: 137 EPECAYLAALRRTDDDLAEMDRMLAGYEAADAAGAIAHHHDYGFHRAIAAATGNQRFVQV 196 Query: 188 MKTLEYDVSHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAMRGHIDNA 247 +K+LEYDVSHAVN++RHL+H PWKR++ A+DEHRQI+ LIR QDAEGAR MR HI+ A Sbjct: 197 LKSLEYDVSHAVNVMRHLVHSEPWKRTRAAIDEHRQIYRLIREQDAEGARNIMRAHIEKA 256 Query: 248 RTRMFNS 254 R+RM NS Sbjct: 257 RSRMLNS 263 >Q21SG5.1 Q21SG5_RHOFD Transcriptional regulator, GntR family Length = 275 Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 149/261 (57%), Positives = 190/261 (72%), Gaps = 7/261 (2%) Query: 1 MPNTSK------PARPGASSDILNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSK 54 MP SK + P + + + GL PVR ERFAERVY++LFH+I+ G++ ++ Sbjct: 11 MPKQSKADAAAGSSGPSQAKNASAMPGLGLEPVRHERFAERVYDSLFHSIMTGKLAPDTR 70 Query: 55 LPSENDLATLFEVSRPVVRQALDRLREDQLVESLRGSGTYVKEKPGLA-PAQPGAEPETR 113 LP E LA F+VSRPVVRQALDRLR+D+LVE +RGSGTYV+ L PA P + T Sbjct: 71 LPPEVQLAHFFQVSRPVVRQALDRLRQDRLVEPIRGSGTYVRACGTLPDPAIPASRYATD 130 Query: 114 IGHIMNGLELRLVIEPECAAMAALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHE 173 + HI++GLELRLVIEPECA +AALRR DL RME +LEGFE A G +AHH+D+GFHE Sbjct: 131 MSHIIHGLELRLVIEPECAHLAALRRKPADLARMEEMLEGFEKATARGDVAHHFDYGFHE 190 Query: 174 AIATATGNLRFVQVMKTLEYDVSHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDA 233 IA AT N R V+V+K+LEYDVSHAVN+ RH+ + PW+R+QDA+DEHR IFELI+ DA Sbjct: 191 TIAQATANPRLVKVLKSLEYDVSHAVNLWRHMAQMKPWQRTQDALDEHRAIFELIKRHDA 250 Query: 234 EGARRAMRGHIDNARTRMFNS 254 +GARRAMR H++ AR RM ++ Sbjct: 251 DGARRAMRSHVEKARVRMLDA 271 >F2IZJ8.1 F2IZJ8_9PROT GntR family transcription regulator protein Length = 258 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 126/262 (48%), Positives = 168/262 (64%), Gaps = 11/262 (4%) Query: 1 MPNTSKPARPGASSDILNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSEND 60 M + PARP A A L + ER A++VYE LFHAIV G I G++LPSEN Sbjct: 2 MEKPASPARPA------EFAFADLQQSKSERLADKVYENLFHAIVTGMIAAGTRLPSENT 55 Query: 61 LATLFEVSRPVVRQALDRLREDQLVESLRGSGTYVKEK-PGLAPAQPGAEPE----TRIG 115 LA F+VSRPV+R+ALD+LRE+ L+ S+RGSGTYVK+ G Q G++ E RIG Sbjct: 56 LAQEFDVSRPVLREALDKLREEGLIYSVRGSGTYVKDAVAGETQEQLGSDAEREVLERIG 115 Query: 116 HIMNGLELRLVIEPECAAMAALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAI 175 +++G+ELRL++EPE A +AA RR D++RM L+ F A + G I H++D+ FHEA+ Sbjct: 116 QMLDGIELRLIVEPEAAYLAARRRTPADIERMRGALDRFNEALQKGAILHYHDYAFHEAV 175 Query: 176 ATATGNLRFVQVMKTLEYDVSHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEG 235 ATAT N R V +K+LEYDVS +V ++R L+ P R + EH +I I A Sbjct: 176 ATATCNPRIVDTLKSLEYDVSRSVTLMRFLVRFQPLVRVEAVQAEHEEILRHIEAGAATE 235 Query: 236 ARRAMRGHIDNARTRMFNSRPG 257 A+RAMR HI++AR RM NSRP Sbjct: 236 AKRAMRNHIEHARIRMLNSRPA 257 >C3KMP7.1 C3KMP7_RHISN Putative GntR family transcriptional regulator Length = 247 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 88/238 (36%), Positives = 130/238 (54%), Gaps = 2/238 (0%) Query: 17 LNLAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSENDLATLFEVSRPVVRQAL 76 LN + L P R ER A+ +Y + I G++ G+KLPSE + + F+VSRPVVR+AL Sbjct: 8 LNDVSLKLKPARRERLADVLYGQILEQITSGQLVEGAKLPSEARICSDFQVSRPVVREAL 67 Query: 77 DRLREDQLVESLRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNGLELRLVIEPECAAMAA 136 RL+ D LV S +G GT+VK +P A E I + E RL +E ECA +AA Sbjct: 68 MRLQADGLVVSRQGIGTFVKSRPSNKLTDFAASAE--IASYLRAFEPRLALETECAGLAA 125 Query: 137 LRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATGNLRFVQVMKTLEYDVS 196 +RR + L+++ L E+A + G DF FH A+A GN F ++++ L +S Sbjct: 126 MRRTKAQLNQIGEALHALESAFQRGENGWEEDFAFHLAVAAGAGNELFPRLLQDLRDIMS 185 Query: 197 HAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAMRGHIDNARTRMFNS 254 ++ M L R + ++EHR+IF I Q+A+ AR MR H+ +R R+ S Sbjct: 186 GSMRMALSLTQQGSDDRRRRVLEEHRKIFMAISSQNADLARLHMRYHLTESRARVTGS 243 >B8IX66.1 B8IX66_METNO GntR domain protein Length = 250 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/229 (40%), Positives = 123/229 (53%), Gaps = 5/229 (2%) Query: 28 RPERFAERVYETLFHAIVEGRITVGSKLPSENDLATLFEVSRPVVRQALDRLREDQLVES 87 RP A+ VY++L I G KLPSENDLA F+VSRP+VR AL+RLR + ++ S Sbjct: 20 RPSSLADGVYQSLVTEIASGTYAENQKLPSENDLAGRFKVSRPIVRAALERLRRENVIVS 79 Query: 88 LRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNGLELRLVIEPECAAMAALRRNRQDLDRM 147 +G+G++V+ + G APA G P I I E RL IEP+ A AALRRN + R+ Sbjct: 80 RQGAGSFVRAR-GKAPAL-GFAPVESIADIQRCYEFRLTIEPDAAFYAALRRNEAAIGRI 137 Query: 148 ERLLEGFEAANRVGGIAHHYDFGFHEAIATATGNLRFVQVMKTLEYDVSHAVNMLRH-LM 206 L+ AA R DF FH AIA A+ N + M+ L+ + AV M H L Sbjct: 138 ASALDLLNAATRQQQHRDDADFAFHLAIAEASNNHYYAASMQALQAHI--AVGMKIHGLA 195 Query: 207 HIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAMRGHIDNARTRMFNSR 255 + P Q DEH IF +R D AR M+ HI ++R R+F R Sbjct: 196 LLGPNSGLQGVFDEHHAIFAAVRDGDPNTARVQMQRHICSSRDRLFECR 244 >B8IND5.1 B8IND5_METNO GntR domain protein Length = 250 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/232 (40%), Positives = 122/232 (52%), Gaps = 5/232 (2%) Query: 25 GPVRPERFAERVYETLFHAIVEGRITVGSKLPSENDLATLFEVSRPVVRQALDRLREDQL 84 G +P A+ VY L I G KLPSEN+LA F+VSRPVVR AL+RLR + + Sbjct: 17 GTSKPSGLADAVYHGLLTEIANGTYAENQKLPSENELAARFQVSRPVVRAALERLRRENV 76 Query: 85 VESLRGSGTYVKEKPGLAPAQPGAEPETRIGHIMNGLELRLVIEPECAAMAALRRNRQDL 144 + S +G+G++V + G APA G P I I E RL IEP+ A AALRRN + Sbjct: 77 IVSRQGAGSFVLAR-GKAPAL-GFAPVESIADIQRCYEFRLTIEPDAAFYAALRRNEAAI 134 Query: 145 DRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATGNLRFVQVMKTLEYDVSHAVNMLRH 204 R+ L+ AA R DF FH AIA A+ N + M+ L+ + AV M H Sbjct: 135 GRIASALDLLNAATRQQQHRDDADFAFHLAIAEASNNHYYAASMQALQAHI--AVGMKIH 192 Query: 205 -LMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAMRGHIDNARTRMFNSR 255 L + P Q ++EHR IF IR D AR M HI ++R R+F R Sbjct: 193 GLALLGPHSGLQGVLEEHRAIFSAIRDGDPNAARAQMHRHICSSRDRLFEGR 244 >A9EGH7.1 A9EGH7_9RHOB Putative transcription regulator protein Length = 238 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 84/238 (35%), Positives = 132/238 (55%), Gaps = 8/238 (3%) Query: 19 LAAAGLGPVRPERFAERVYETLFHAIVEGRITVGSKLPSENDLATLFEVSRPVVRQALDR 78 + A L + + A+++Y + IV ++ G KLPSEN +AT F VSRPVVR+AL + Sbjct: 1 MTAPKLKIKKRQTLADQLYGQVLEQIVSNKLVQGEKLPSENQIATAFGVSRPVVREALRK 60 Query: 79 LREDQLVESLRGSGTYVKEKPG---LAPAQPGAEPETRIGHIMNGLELRLVIEPECAAMA 135 L+ED LVE+ RG GT+V+ +P + A G+ + +M +E R+ +E A MA Sbjct: 61 LQEDGLVEARRGVGTFVRRRPSEKLIEYATAGS-----VAGLMRAMEARITVEKATARMA 115 Query: 136 ALRRNRQDLDRMERLLEGFEAANRVGGIAHHYDFGFHEAIATATGNLRFVQVMKTLEYDV 195 A R N +D+ R+E L+ EA+ + + D+ FH AIA A+GN F++++ + Sbjct: 116 AQRANPKDIARIEAALQTLEASMQARTPSFDADYQFHRAIAAASGNEVFIRMLDCARESI 175 Query: 196 SHAVNMLRHLMHIAPWKRSQDAMDEHRQIFELIRVQDAEGARRAMRGHIDNARTRMFN 253 +++ + L R + EHRQI E IR D+E A +M H+ ARTR+ + Sbjct: 176 EQGIDVAQKLTREGSQARIDVVISEHRQILEAIRAGDSEVAGVSMAYHLLQARTRITD 233