BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0003.p (92 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRW8.1 D8IRW8_HERSS Exodeoxyribonuclease 7 small subunit EC=3.... 142 2e-32 A4G1W7.1 EX7S_HERAR Exodeoxyribonuclease 7 small subunit EC=3.1.... 122 1e-26 A6SUS2.1 EX7S_JANMA Exodeoxyribonuclease 7 small subunit EC=3.1.... 122 1e-26 F1W0B9.1 F1W0B9_9BURK Putative Exodeoxyribonuclease VII small su... 114 4e-24 Q0K858.1 Q0K858_CUPNH Exodeoxyribonuclease 7 small subunit EC=3.... 103 1e-20 E2T1C5.1 E2T1C5_9RALS Exodeoxyribonuclease 7 small subunit EC=3.... 100 1e-19 B2U932.1 EX7S_RALPJ Exodeoxyribonuclease 7 small subunit EC=3.1.... 100 1e-19 Q474C4.1 Q474C4_CUPPJ Exodeoxyribonuclease 7 small subunit EC=3.... 98 4e-19 Q8XX93.1 EX7S_RALSO Exodeoxyribonuclease 7 small subunit EC=3.1.... 98 5e-19 B5S1Z8.1 B5S1Z8_RALSO Exodeoxyribonuclease 7 small subunit EC=3.... 97 6e-19 >D8IRW8.1 D8IRW8_HERSS Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 92 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/92 (97%), Positives = 92/92 (100%) Query: 1 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFC 60 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELV+FC Sbjct: 1 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVKFC 60 Query: 61 AAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 AAQLDKVDTQVKLLEGDMLKPFQAA+MDGEEG Sbjct: 61 AAQLDKVDTQVKLLEGDMLKPFQAADMDGEEG 92 >A4G1W7.1 EX7S_HERAR Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 84 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/72 (81%), Positives = 68/72 (94%) Query: 13 AASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFCAAQLDKVDTQVK 72 + SA LP+SFE+AM ELEQLVA+MEAGELPLEASVAAYKRGSELV++CAAQL+KVD+QVK Sbjct: 5 STSAALPSSFEEAMAELEQLVARMEAGELPLEASVAAYKRGSELVKYCAAQLEKVDSQVK 64 Query: 73 LLEGDMLKPFQA 84 +LEGDMLKPF A Sbjct: 65 VLEGDMLKPFNA 76 >A6SUS2.1 EX7S_JANMA Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 84 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/72 (81%), Positives = 67/72 (93%) Query: 13 AASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFCAAQLDKVDTQVK 72 + SA LP+SFE+AM ELEQLVA+MEAGELPLEASVAAYKRGSELV++CAAQL+KVD QVK Sbjct: 5 STSAALPSSFEEAMAELEQLVARMEAGELPLEASVAAYKRGSELVKYCAAQLEKVDNQVK 64 Query: 73 LLEGDMLKPFQA 84 +LEGDMLKPF A Sbjct: 65 VLEGDMLKPFNA 76 >F1W0B9.1 F1W0B9_9BURK Putative Exodeoxyribonuclease VII small subunit (Exonuclease VII small subunit) (XseB) Length = 93 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/78 (75%), Positives = 66/78 (84%), Gaps = 2/78 (2%) Query: 15 SAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFCAAQLDKVDTQVKLL 74 SA PASFE AM EL +LVAQMEAGELPLEASVAAYKRGSELV+FCA QLDKVD+QV++L Sbjct: 17 SADTPASFEDAMAELARLVAQMEAGELPLEASVAAYKRGSELVKFCAVQLDKVDSQVRVL 76 Query: 75 EGDMLKPFQAAEMDGEEG 92 EGDMLKP + + GE G Sbjct: 77 EGDMLKPLDS--VAGEAG 92 >Q0K858.1 Q0K858_CUPNH Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 102 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/97 (56%), Positives = 74/97 (76%), Gaps = 7/97 (7%) Query: 1 MPRTSAT-----ASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSE 55 MP+T+ +A ++ASAP PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+E Sbjct: 1 MPKTTTAPVQTDNTADTSASAP-PASYEAAMAELETLVASMESGELPLEASLAAYRRGAE 59 Query: 56 LVRFCAAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 LVR+C +L++V+ QV++LEGD+LKP A E +G G Sbjct: 60 LVRYCQQKLERVEQQVRVLEGDVLKPL-AGEGNGANG 95 >E2T1C5.1 E2T1C5_9RALS Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 94 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/92 (54%), Positives = 66/92 (71%) Query: 1 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFC 60 MPR A +ASA + PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELV++C Sbjct: 1 MPRAPNDAPSASATPSATPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVKYC 60 Query: 61 AAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 L++V+ QV++L+GD LKP E+G Sbjct: 61 QQVLERVEQQVRVLDGDALKPLGDDSNTNEQG 92 >B2U932.1 EX7S_RALPJ Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 94 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/92 (54%), Positives = 66/92 (71%) Query: 1 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFC 60 MPR A +ASA + PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELV++C Sbjct: 1 MPRAPNDAPSASATPSATPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVKYC 60 Query: 61 AAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 L++V+ QV++L+GD LKP E+G Sbjct: 61 QQVLERVEQQVRVLDGDALKPLGDDSNTNEQG 92 >Q474C4.1 Q474C4_CUPPJ Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 103 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 4/85 (4%) Query: 1 MPRTSAT---ASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELV 57 MP+T+ +A SAP PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELV Sbjct: 1 MPKTTTDPVQTEDTAAGSAP-PASYEAAMAELETLVASMESGELPLEASLAAYRRGAELV 59 Query: 58 RFCAAQLDKVDTQVKLLEGDMLKPF 82 R+C +L++V+ QV++LEGD+LKP Sbjct: 60 RYCQQKLERVEQQVRVLEGDVLKPM 84 >Q8XX93.1 EX7S_RALSO Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 94 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 2/93 (2%) Query: 1 MPRTSATASAASAASAP-LPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRF 59 MPR A + + S+P PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELVR+ Sbjct: 1 MPRAQDVAQSDATLSSPATPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVRY 60 Query: 60 CAAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 C L++V+ QV++L+GD LKP A E E+G Sbjct: 61 CQQVLERVEQQVRVLDGDALKPL-AGEGTNEQG 92 >B5S1Z8.1 B5S1Z8_RALSO Exodeoxyribonuclease 7 small subunit EC=3.1.11.6 Length = 105 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/95 (58%), Positives = 71/95 (74%), Gaps = 6/95 (6%) Query: 1 MPRTSATASAASAASAPL---PASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELV 57 MPR A +A S A+APL PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELV Sbjct: 12 MPR--AQDAAPSDATAPLSAPPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELV 69 Query: 58 RFCAAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 R+C L++V+ QV++L+GD LKP A E E+G Sbjct: 70 RYCQQVLERVEQQVRVLDGDALKPL-ADEGTNEQG 103