BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0021.p (83 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITY7.1 D8ITY7_HERSS 50S ribosomal protein L1 132 2e-29 F1VZW8.1 F1VZW8_9BURK LSU ribosomal protein L1p (L10Ae) 124 3e-27 A4G9U8.1 RL1_HERAR 50S ribosomal protein L1 119 1e-25 A6T3L6.1 RL1_JANMA 50S ribosomal protein L1 117 4e-25 C3XCN3.1 C3XCN3_OXAFO 50S ribosomal protein L1 108 2e-22 C3X6G2.1 C3X6G2_OXAFO 50S ribosomal protein L1 107 6e-22 D8NM99.1 D8NM99_RALSO 50S ribosomal protein L1 4 105 2e-21 D8NWL9.1 D8NWL9_RALSO 50S ribosomal protein L1 5 104 4e-21 Q8XUZ5.1 RL1_RALSO 50S ribosomal protein L1 104 4e-21 D8N541.1 D8N541_RALSO 50S ribosomal protein L1 3 104 4e-21 >D8ITY7.1 D8ITY7_HERSS 50S ribosomal protein L1 Length = 231 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/66 (100%), Positives = 66/66 (100%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR Sbjct: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >F1VZW8.1 F1VZW8_9BURK LSU ribosomal protein L1p (L10Ae) Length = 231 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/66 (92%), Positives = 64/66 (96%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK+SKR+KA+K KVDRTKAYPFDNAVSLIKE ATAKFNESIDVSVQLGVDAKKSDQVVR Sbjct: 1 MAKLSKRIKAIKAKVDRTKAYPFDNAVSLIKELATAKFNESIDVSVQLGVDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >A4G9U8.1 RL1_HERAR 50S ribosomal protein L1 Length = 231 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/66 (89%), Positives = 63/66 (95%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK+SKRVKA K KVDRTKAYPFDNA++LIKE A+AKFNESIDVSVQLGVDAKKSDQVVR Sbjct: 1 MAKLSKRVKAFKAKVDRTKAYPFDNALALIKECASAKFNESIDVSVQLGVDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >A6T3L6.1 RL1_JANMA 50S ribosomal protein L1 Length = 231 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/66 (87%), Positives = 63/66 (95%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK+SKRVKA K KVDRTKAYPFDNAV+LIKE A+AKF+ESID+SVQLGVDAKKSDQVVR Sbjct: 1 MAKLSKRVKAFKAKVDRTKAYPFDNAVALIKECASAKFDESIDISVQLGVDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >C3XCN3.1 C3XCN3_OXAFO 50S ribosomal protein L1 Length = 231 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/66 (78%), Positives = 60/66 (90%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK SKRV+A +EK+D TK YP D+A++L+KEFATAKFNESIDV+VQLGVD KKSDQVVR Sbjct: 1 MAKASKRVRAFQEKLDSTKVYPIDDALALLKEFATAKFNESIDVAVQLGVDPKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >C3X6G2.1 C3X6G2_OXAFO 50S ribosomal protein L1 Length = 231 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 52/66 (78%), Positives = 59/66 (89%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK SKRV+A +EKVDR+K Y D A++L+KEFATAKFNESIDV+VQLGVD KKSDQVVR Sbjct: 1 MAKASKRVRAFQEKVDRSKVYSLDAALALLKEFATAKFNESIDVAVQLGVDPKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >D8NM99.1 D8NM99_RALSO 50S ribosomal protein L1 4 Length = 231 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/66 (78%), Positives = 59/66 (89%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK+SKRV A K KV+RTK YP D A+SLIKE A+AKF+ESIDV+VQLG+DAKKSDQVVR Sbjct: 1 MAKISKRVAANKAKVERTKFYPIDEALSLIKECASAKFDESIDVAVQLGIDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >D8NWL9.1 D8NWL9_RALSO 50S ribosomal protein L1 5 Length = 231 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 51/66 (77%), Positives = 59/66 (89%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK+SKRV A K KV+RTK YP D A+SL+KE A+AKF+ESIDV+VQLG+DAKKSDQVVR Sbjct: 1 MAKISKRVAANKAKVERTKFYPIDEALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >Q8XUZ5.1 RL1_RALSO 50S ribosomal protein L1 Length = 231 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 51/66 (77%), Positives = 59/66 (89%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK+SKRV A K KV+RTK YP D A+SL+KE A+AKF+ESIDV+VQLG+DAKKSDQVVR Sbjct: 1 MAKISKRVAANKAKVERTKFYPIDEALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66 >D8N541.1 D8N541_RALSO 50S ribosomal protein L1 3 Length = 231 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 51/66 (77%), Positives = 59/66 (89%) Query: 1 MAKVSKRVKAMKEKVDRTKAYPFDNAVSLIKEFATAKFNESIDVSVQLGVDAKKSDQVVR 60 MAK+SKRV A K KV+RTK YP D A+SL+KE A+AKF+ESIDV+VQLG+DAKKSDQVVR Sbjct: 1 MAKISKRVAANKAKVERTKFYPIDEALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVR 60 Query: 61 GSVVLP 66 GSVVLP Sbjct: 61 GSVVLP 66