BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0020.p (108 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITY6.1 D8ITY6_HERSS 50S ribosomal protein L11 215 1e-54 F1VZW9.1 F1VZW9_9BURK LSU ribosomal protein L11p (L12e) 202 1e-50 D5CP54.1 D5CP54_SIDLE 50S ribosomal protein L11 200 5e-50 C4KC63.1 C4KC63_THASP 50S ribosomal protein L11 199 8e-50 Q47JB4.1 RL11_DECAR 50S ribosomal protein L11 199 1e-49 B5RWZ6.1 B5RWZ6_RALSO 50S ribosomal protein L11 2 199 2e-49 D8NWL8.1 D8NWL8_RALSO 50S ribosomal protein L11 5 198 2e-49 D8NM98.1 D8NM98_RALSO 50S ribosomal protein L11 4 198 2e-49 C6BFX2.1 C6BFX2_RALP1 50S ribosomal protein L11 197 3e-49 E2T443.1 E2T443_9RALS 50S ribosomal protein L11 197 3e-49 >D8ITY6.1 D8ITY6_HERSS 50S ribosomal protein L11 Length = 143 Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 143 >F1VZW9.1 F1VZW9_9BURK LSU ribosomal protein L11p (L12e) Length = 143 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 100/108 (92%), Positives = 104/108 (96%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGI KGS KPHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGITKGSPKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVG ITRKQAEEIATQK+PDLTAAD++AAVR IAGSARSMGITVEG+ Sbjct: 96 DKVGSITRKQAEEIATQKRPDLTAADMDAAVRIIAGSARSMGITVEGM 143 >D5CP54.1 D5CP54_SIDLE 50S ribosomal protein L11 Length = 144 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 98/108 (90%), Positives = 104/108 (96%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAG+QKGS PHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGVQKGSKTPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGK+TRKQAE+IA K+PDLTAADL+AAVRTIAGSARSMGITVEG+ Sbjct: 96 DKVGKLTRKQAEDIAKAKQPDLTAADLDAAVRTIAGSARSMGITVEGV 143 >C4KC63.1 C4KC63_THASP 50S ribosomal protein L11 Length = 143 Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 98/108 (90%), Positives = 104/108 (96%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA+TQG+EPGLPIPVVITAFADKSFTF+MKTPPATILIKKAAGIQKGS+KPHT Sbjct: 36 MEFCKAFNAKTQGMEPGLPIPVVITAFADKSFTFIMKTPPATILIKKAAGIQKGSAKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR Q E+IA K+PDLTAADLEAAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQVEDIAKAKQPDLTAADLEAAVRTIAGSARSMGITVEGL 143 >Q47JB4.1 RL11_DECAR 50S ribosomal protein L11 Length = 143 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/108 (90%), Positives = 102/108 (94%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGI+ GS+KPHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIKSGSAKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR Q EEIA K PDLTAAD+EAA+RTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQCEEIAKTKSPDLTAADMEAAIRTIAGSARSMGITVEGL 143 >B5RWZ6.1 B5RWZ6_RALSO 50S ribosomal protein L11 2 Length = 143 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/108 (89%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAG+QKGSSKPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGVQKGSSKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143 >D8NWL8.1 D8NWL8_RALSO 50S ribosomal protein L11 5 Length = 143 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/108 (89%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAG+QKGSSKPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGVQKGSSKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143 >D8NM98.1 D8NM98_RALSO 50S ribosomal protein L11 4 Length = 143 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/108 (89%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAG+QKGSSKPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGVQKGSSKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143 >C6BFX2.1 C6BFX2_RALP1 50S ribosomal protein L11 Length = 143 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/108 (89%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAGIQKGS+KPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGIQKGSAKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143 >E2T443.1 E2T443_9RALS 50S ribosomal protein L11 Length = 143 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/108 (89%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAGIQKGS+KPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGIQKGSAKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143