BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0538.p (832 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ITP2.1 D8ITP2_HERSS DNA gyrase subunit B EC=5.99.1.3 1716 0.0 A2RQ01.1 A2RQ01_HERSE DNA gyrase subunit B EC=5.99.1.3 1713 0.0 A6STW4.1 A6STW4_JANMA DNA gyrase subunit B EC=5.99.1.3 1386 0.0 A4G157.1 A4G157_HERAR DNA gyrase subunit B EC=5.99.1.3 1368 0.0 C3X5W3.1 C3X5W3_OXAFO DNA gyrase subunit B EC=5.99.1.3 1261 0.0 C3XC43.1 C3XC43_OXAFO DNA gyrase subunit B EC=5.99.1.3 1261 0.0 D8NSJ8.1 D8NSJ8_RALSO DNA gyrase subunit B EC=5.99.1.3 1232 0.0 Q8XTV6.1 Q8XTV6_RALSO DNA gyrase subunit B EC=5.99.1.3 1228 0.0 D8ND75.1 D8ND75_RALSO DNA gyrase subunit B EC=5.99.1.3 1218 0.0 B5SE25.1 B5SE25_RALSO DNA gyrase subunit B EC=5.99.1.3 1215 0.0 >D8ITP2.1 D8ITP2_HERSS DNA gyrase subunit B EC=5.99.1.3 Length = 832 Score = 1716 bits (4445), Expect = 0.0, Method: Compositional matrix adjust. Identities = 831/832 (99%), Positives = 831/832 (99%) Query: 1 MSTSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID 60 MSTSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID Sbjct: 1 MSTSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID 60 Query: 61 EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD 120 EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD Sbjct: 61 EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD 120 Query: 121 QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVSP 180 QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVSP Sbjct: 121 QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVSP 180 Query: 181 IKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE 240 IKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE Sbjct: 181 IKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE 240 Query: 241 DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCF 300 DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCF Sbjct: 241 DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCF 300 Query: 301 TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE 360 TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE Sbjct: 301 TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE 360 Query: 361 PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR 420 PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR Sbjct: 361 PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR 420 Query: 421 ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK 480 ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK Sbjct: 421 ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK 480 Query: 481 VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL 540 VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL Sbjct: 481 VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL 540 Query: 541 LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPA 600 LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPA Sbjct: 541 LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPA 600 Query: 601 EDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAE 660 EDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAE Sbjct: 601 EDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAE 660 Query: 661 ELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET 720 ELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET Sbjct: 661 ELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET 720 Query: 721 FKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLGEMNPEQLWE 780 FKGLIRKGATVARGQGEKRKESVITDFRQ MAWLRDEAERGVNKQRYKGLGEMNPEQLWE Sbjct: 721 FKGLIRKGATVARGQGEKRKESVITDFRQAMAWLRDEAERGVNKQRYKGLGEMNPEQLWE 780 Query: 781 TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV Sbjct: 781 TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 >A2RQ01.1 A2RQ01_HERSE DNA gyrase subunit B EC=5.99.1.3 Length = 832 Score = 1713 bits (4436), Expect = 0.0, Method: Compositional matrix adjust. Identities = 830/832 (99%), Positives = 830/832 (99%) Query: 1 MSTSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID 60 MSTSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID Sbjct: 1 MSTSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID 60 Query: 61 EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD 120 EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD Sbjct: 61 EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD 120 Query: 121 QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVSP 180 QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVSP Sbjct: 121 QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVSP 180 Query: 181 IKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE 240 IKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE Sbjct: 181 IKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE 240 Query: 241 DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCF 300 DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCF Sbjct: 241 DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCF 300 Query: 301 TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE 360 TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE Sbjct: 301 TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE 360 Query: 361 PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR 420 PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR Sbjct: 361 PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR 420 Query: 421 ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK 480 ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK Sbjct: 421 ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK 480 Query: 481 VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL 540 VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL Sbjct: 481 VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL 540 Query: 541 LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPA 600 LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPA Sbjct: 541 LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPA 600 Query: 601 EDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAE 660 EDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAE Sbjct: 601 EDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAE 660 Query: 661 ELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET 720 ELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET Sbjct: 661 ELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET 720 Query: 721 FKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLGEMNPEQLWE 780 FKGLIRKGATVARGQ EKRKESVITDFRQ MAWLRDEAERGVNKQRYKGLGEMNPEQLWE Sbjct: 721 FKGLIRKGATVARGQCEKRKESVITDFRQAMAWLRDEAERGVNKQRYKGLGEMNPEQLWE 780 Query: 781 TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV Sbjct: 781 TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 >A6STW4.1 A6STW4_JANMA DNA gyrase subunit B EC=5.99.1.3 Length = 832 Score = 1386 bits (3588), Expect = 0.0, Method: Compositional matrix adjust. Identities = 692/833 (83%), Positives = 747/833 (89%), Gaps = 2/833 (0%) Query: 1 MSTSPADNTNSAQQS-YGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI 59 MS P DN Q + YGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHH VFEVLDNSI Sbjct: 1 MSAIPNDNAPQPQSAQYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHCVFEVLDNSI 60 Query: 60 DEALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKF 119 DE+LAG+C+EIHVTIH+DNSISITDNGRGIPTG+K DDKHEPKRSAAEIVMTELHAGGKF Sbjct: 61 DESLAGHCTEIHVTIHSDNSISITDNGRGIPTGIKWDDKHEPKRSAAEIVMTELHAGGKF 120 Query: 120 DQNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVS 179 DQNSYKVSGGLHGVGVSCVN LSK LKLTIRRDGK H MEF +G+ QNRE+E +DG+ VS Sbjct: 121 DQNSYKVSGGLHGVGVSCVNGLSKLLKLTIRRDGKKHEMEFVRGVPQNREVETIDGMVVS 180 Query: 180 PIKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKE 239 PIKV+G++DKRGTEVHFWADEEIFT+VEFHY+ILAKRIRELSFLNNGVHIKL+DQRTGKE Sbjct: 181 PIKVVGDTDKRGTEVHFWADEEIFTNVEFHYDILAKRIRELSFLNNGVHIKLSDQRTGKE 240 Query: 240 EDFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLC 299 EDFAFEGGTRGFVEYINK KS+L+PTIFQATGE+ SDQGT ITVDVSMQWNDA+NEQVLC Sbjct: 241 EDFAFEGGTRGFVEYINKAKSVLHPTIFQATGERLSDQGTNITVDVSMQWNDAYNEQVLC 300 Query: 300 FTNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVP 359 FTNNIPQRDGGTHLTGLRAAMTRVINKYI+E++ AKKAKVEISGDDMREGLTCVLSVKVP Sbjct: 301 FTNNIPQRDGGTHLTGLRAAMTRVINKYIDEHEFAKKAKVEISGDDMREGLTCVLSVKVP 360 Query: 360 EPKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKA 419 EPKFSSQTKDKLVSSEVRGPVEEIVAKTL D+L EKPNDAKIICGKIVEAARAREAARKA Sbjct: 361 EPKFSSQTKDKLVSSEVRGPVEEIVAKTLADYLQEKPNDAKIICGKIVEAARAREAARKA 420 Query: 420 RELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRG 479 R+LTRRKGVMDGLGLS+KLADCQE+DPALCELY+VEGDSAGGSAKQGRDRKFQAILPLRG Sbjct: 421 RDLTRRKGVMDGLGLSAKLADCQEKDPALCELYVVEGDSAGGSAKQGRDRKFQAILPLRG 480 Query: 480 KVLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRT 539 KVLNVEKARFEKML+SEQITTLIATLGTSIGADEFN +KLRYHRIIIMTDADVDGAHIRT Sbjct: 481 KVLNVEKARFEKMLASEQITTLIATLGTSIGADEFNIEKLRYHRIIIMTDADVDGAHIRT 540 Query: 540 LLLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKP 599 LLLTL YRQMP LVERGH+YIAQPPLYKVK GKDERYLKDD EEA YMMQIALNDA + P Sbjct: 541 LLLTLLYRQMPQLVERGHVYIAQPPLYKVKHGKDERYLKDDVEEAVYMMQIALNDAALIP 600 Query: 600 AEDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATA 659 +E A I G+AL EL RQYN ANAII RLTRA+D +AL AIMT GV L + ++E A A+A Sbjct: 601 SEGAQPIAGDALAELVRQYNMANAIINRLTRAVDGAALTAIMT-GVTLDLSSVEAAQASA 659 Query: 660 EELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAE 719 + L++ IN+ + V + DE S K L I+R HGN+KA+ ID+DFV+GPDY VL+ AA Sbjct: 660 QRLEQGINEPAVTVTVKSDELSGKHTLRINRMYHGNVKASSIDSDFVTGPDYTVLAAAAA 719 Query: 720 TFKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLGEMNPEQLW 779 TFKGLI GA V RG GEK K S I+DF Q M WLR EAER V KQRYKGLGEMNPEQLW Sbjct: 720 TFKGLIGPGALVQRGAGEKAKVSAISDFHQAMNWLRSEAERNVGKQRYKGLGEMNPEQLW 779 Query: 780 ETTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 ETTMDP VRRLLKVQIEDAIAADQIF TLMGDDVEPRRAFIE NAL AGNID+ Sbjct: 780 ETTMDPAVRRLLKVQIEDAIAADQIFTTLMGDDVEPRRAFIELNALSAGNIDI 832 >A4G157.1 A4G157_HERAR DNA gyrase subunit B EC=5.99.1.3 Length = 835 Score = 1368 bits (3540), Expect = 0.0, Method: Compositional matrix adjust. Identities = 685/836 (81%), Positives = 743/836 (88%), Gaps = 5/836 (0%) Query: 1 MSTSPADNT----NSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLD 56 MS P DNT ++ +YGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHH VFEVLD Sbjct: 1 MSAIPNDNTPQSPSTLSAAYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHCVFEVLD 60 Query: 57 NSIDEALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAG 116 NSIDE+LAG+C+EIHVTIH+DNSISITDNGRGIPTG+K DDKHEPKRSAAEIVMTELHAG Sbjct: 61 NSIDESLAGHCTEIHVTIHSDNSISITDNGRGIPTGIKWDDKHEPKRSAAEIVMTELHAG 120 Query: 117 GKFDQNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGV 176 GKFDQNSYKVSGGLHGVGVSCVN LS+ LKLTIRRDGK H MEF +G+ QNRE+E +DG Sbjct: 121 GKFDQNSYKVSGGLHGVGVSCVNGLSRLLKLTIRRDGKTHYMEFVRGVPQNREIETIDGH 180 Query: 177 QVSPIKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRT 236 VSPIKVIGE+DKRGTEVHFWADEEIF +VEFHY+ILAKRIRELSFLNNGV I+L+DQRT Sbjct: 181 IVSPIKVIGETDKRGTEVHFWADEEIFNNVEFHYDILAKRIRELSFLNNGVRIRLSDQRT 240 Query: 237 GKEEDFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQ 296 GKEE FAFEGGTRGFVEYINK KS+L+PTIFQATGE+ SDQGT I VDVSMQWNDA+NEQ Sbjct: 241 GKEELFAFEGGTRGFVEYINKAKSVLHPTIFQATGERLSDQGTNIAVDVSMQWNDAYNEQ 300 Query: 297 VLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSV 356 V+CFTNNIPQRDGGTHLTGLRAAMTRVINKYI+E++ AKKAKVE++GDDMREGLTCVLSV Sbjct: 301 VICFTNNIPQRDGGTHLTGLRAAMTRVINKYIDEHEFAKKAKVEVTGDDMREGLTCVLSV 360 Query: 357 KVPEPKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAA 416 KVPEPKFSSQTKDKLVSSEVRGPVEEIVAKTL D+L EKPNDAKIICGKIVEAARAREAA Sbjct: 361 KVPEPKFSSQTKDKLVSSEVRGPVEEIVAKTLADYLQEKPNDAKIICGKIVEAARAREAA 420 Query: 417 RKARELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILP 476 RKAR+LTRRKGVMDGLGLSSKLADCQE+DPALCELY+VEGDSAGGSAKQGRDRKFQAILP Sbjct: 421 RKARDLTRRKGVMDGLGLSSKLADCQEKDPALCELYVVEGDSAGGSAKQGRDRKFQAILP 480 Query: 477 LRGKVLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAH 536 LRGKVLNVEKARFEKML+SEQITTLIATLGTSIGADEFN +KLRYHRIIIMTDADVDGAH Sbjct: 481 LRGKVLNVEKARFEKMLASEQITTLIATLGTSIGADEFNIEKLRYHRIIIMTDADVDGAH 540 Query: 537 IRTLLLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAE 596 IRTLLLTL YRQMP LVERGH+YIAQPPLYKVK GKDERYLKDD EEA YMMQIALNDA Sbjct: 541 IRTLLLTLLYRQMPQLVERGHVYIAQPPLYKVKHGKDERYLKDDVEEAVYMMQIALNDAA 600 Query: 597 IKPAEDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQAT 656 + PAE A I+G+AL EL RQYNT+NAII RLTR +D +AL AIMT GV L + + E A Sbjct: 601 LVPAEGAEPISGDALAELVRQYNTSNAIINRLTRMVDGAALTAIMT-GVTLDLSSQEAAN 659 Query: 657 ATAEELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLST 716 A+A+ L+ I + +++V R DE +EK +L IHR HGNIK + IDA+FV+G DY+VL+ Sbjct: 660 ASAQRLQDGIGEPSVEVIVRHDELAEKFSLRIHRMYHGNIKVSAIDAEFVNGADYRVLAA 719 Query: 717 AAETFKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLGEMNPE 776 AA TFKGLI GA V RG GEK K I DF Q M WLR EAER V KQRYKGLGEMNP Sbjct: 720 AAATFKGLIGTGAMVQRGVGEKVKSIGINDFHQAMNWLRSEAERNVGKQRYKGLGEMNPS 779 Query: 777 QLWETTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 QLWETTMDPTVRRLLKVQIEDAIAADQIF TLMGDDVEPRRAFIE NAL AGNID+ Sbjct: 780 QLWETTMDPTVRRLLKVQIEDAIAADQIFTTLMGDDVEPRRAFIELNALSAGNIDI 835 >C3X5W3.1 C3X5W3_OXAFO DNA gyrase subunit B EC=5.99.1.3 Length = 830 Score = 1261 bits (3263), Expect = 0.0, Method: Compositional matrix adjust. Identities = 620/832 (74%), Positives = 710/832 (85%), Gaps = 2/832 (0%) Query: 1 MSTSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID 60 MS + + +YG SSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID Sbjct: 1 MSQNTQNEVQENGNAYGESSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID 60 Query: 61 EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD 120 EALAGYC+EI VT+HADNS+S+ DNGRG+PTG+K DDK+ PKRSAAEIVMTELHAGGKFD Sbjct: 61 EALAGYCTEIQVTLHADNSVSVVDNGRGVPTGIKFDDKNTPKRSAAEIVMTELHAGGKFD 120 Query: 121 QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVSP 180 QNSYKVSGGLHGVGVSCVNALS L+LTI RDGK H M+F+ G+ QN +E+++GV+ SP Sbjct: 121 QNSYKVSGGLHGVGVSCVNALSTTLQLTIWRDGKEHYMDFSHGLPQNAAVEIINGVECSP 180 Query: 181 IKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE 240 IKVIG+SD++GT V FW D IFT VEF YE+LA+RIRELSFLNNGV I+LTDQRTGKEE Sbjct: 181 IKVIGDSDRQGTRVQFWPDASIFTTVEFQYEVLARRIRELSFLNNGVRIRLTDQRTGKEE 240 Query: 241 DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCF 300 FA+EGGTRGFVEYIN+ KS+L+PTIFQATGE+ S+ T I VD+SMQWND++NEQVLCF Sbjct: 241 IFAYEGGTRGFVEYINRGKSVLHPTIFQATGERISELDTPIYVDISMQWNDSYNEQVLCF 300 Query: 301 TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE 360 TNNIPQRDGGTHLTGLRAAMTRVIN+YIEEN+LAKKAKV+++GDDMREGLTCVLSVKVPE Sbjct: 301 TNNIPQRDGGTHLTGLRAAMTRVINRYIEENELAKKAKVDVTGDDMREGLTCVLSVKVPE 360 Query: 361 PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR 420 PKFSSQTKDKLVSSEVRGPVEEI+ KTLTDFL EKPNDAKIIC KIVEAARAREAARKAR Sbjct: 361 PKFSSQTKDKLVSSEVRGPVEEIITKTLTDFLQEKPNDAKIICSKIVEAARAREAARKAR 420 Query: 421 ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK 480 ELTRRKGV+DGLGLS+KLADCQE+DPAL ELY+VEGDSAGGSAKQGRDR+FQAILPLRGK Sbjct: 421 ELTRRKGVLDGLGLSAKLADCQEKDPALSELYLVEGDSAGGSAKQGRDRRFQAILPLRGK 480 Query: 481 VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL 540 VLNVEK+R+EKMLSSEQITTLIATLGTSIG DEFN +KLRYHRIIIMTDADVDGAHIRTL Sbjct: 481 VLNVEKSRYEKMLSSEQITTLIATLGTSIGPDEFNIEKLRYHRIIIMTDADVDGAHIRTL 540 Query: 541 LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPA 600 LLTLFYRQMP LVERG++YIAQPPLYK+K GKDERYLKDD EEA +MM IAL A + P Sbjct: 541 LLTLFYRQMPQLVERGYVYIAQPPLYKIKNGKDERYLKDDLEEANHMMSIALQGASLLPG 600 Query: 601 EDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAE 660 E I+GE L E+A Q+ A II RL+R ID L AIM GV L+++ +E A +A Sbjct: 601 EGVAPISGEQLKEMADQHTVAYNIIQRLSRFIDTDVLSAIMD-GVKLRLNTIEDAEKSAV 659 Query: 661 ELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET 720 EL AIND ++ V+ + S ++L + R +GN TV+D DFV G DY++L A + Sbjct: 660 ELTAAINDPSVTVKVEKNA-SGALSLLVERTLYGNRHVTVLDTDFVYGNDYRILEKTATS 718 Query: 721 FKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLGEMNPEQLWE 780 F LI GA + RG+G++ K+ + +F Q M WLR EAERG++KQRYKGLGEMNP+QLWE Sbjct: 719 FLNLIGSGAVIRRGEGDRMKQQAVQNFHQAMQWLRTEAERGISKQRYKGLGEMNPDQLWE 778 Query: 781 TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 TTMDP++RRLLKV+IEDAIAADQIF TLMGD+VEPRRAFIE++AL AGNIDV Sbjct: 779 TTMDPSMRRLLKVRIEDAIAADQIFTTLMGDNVEPRRAFIENHALLAGNIDV 830 >C3XC43.1 C3XC43_OXAFO DNA gyrase subunit B EC=5.99.1.3 Length = 830 Score = 1261 bits (3262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 618/832 (74%), Positives = 711/832 (85%), Gaps = 2/832 (0%) Query: 1 MSTSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID 60 MS + ++ +++YG SSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID Sbjct: 1 MSQNSQNDVQQNEENYGVSSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID 60 Query: 61 EALAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFD 120 EALAG+C+EIHVT+HADNS+S+ DNGRG+PTG+K DDK+ P+RSAAEIVMTELHAGGKFD Sbjct: 61 EALAGFCTEIHVTLHADNSVSVVDNGRGVPTGIKFDDKNTPRRSAAEIVMTELHAGGKFD 120 Query: 121 QNSYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDGVQVSP 180 QNSYKVSGGLHGVGVSCVN LS LKLTI RDGK H MEFA+G+ QN +EM++GV+ SP Sbjct: 121 QNSYKVSGGLHGVGVSCVNGLSTLLKLTIWRDGKEHYMEFAQGLPQNNSVEMINGVECSP 180 Query: 181 IKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEE 240 IK++G SDK+GT V FW D IFT +EF YE+LA+RIRELSFLNNGV I+LTDQRTGKEE Sbjct: 181 IKIVGVSDKQGTRVQFWPDPTIFTTIEFQYEVLARRIRELSFLNNGVRIRLTDQRTGKEE 240 Query: 241 DFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCF 300 FA+EGGTRGFVEYIN+ KS+L+PTIFQATGE+ S+ GT I VD+SMQWND++NEQVLCF Sbjct: 241 IFAYEGGTRGFVEYINRGKSVLHPTIFQATGERMSELGTPIYVDISMQWNDSYNEQVLCF 300 Query: 301 TNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPE 360 TNNIPQRDGGTHLTGLRAAMTRVIN+YIEEN+LAKKAKV+++GDDMREGLTCVLSVKVPE Sbjct: 301 TNNIPQRDGGTHLTGLRAAMTRVINRYIEENELAKKAKVDVTGDDMREGLTCVLSVKVPE 360 Query: 361 PKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAR 420 PKFSSQTKDKLVSSEVRGPVEEI+ KTLTDFL EKPNDAKIIC KIVEAARAREAARKAR Sbjct: 361 PKFSSQTKDKLVSSEVRGPVEEIITKTLTDFLQEKPNDAKIICSKIVEAARAREAARKAR 420 Query: 421 ELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGK 480 ELTRRKGV+DGLGLS+KLADCQE+DP++CELY+VEGDSAGGSAKQGRDRKFQAILPLRGK Sbjct: 421 ELTRRKGVLDGLGLSAKLADCQEKDPSMCELYLVEGDSAGGSAKQGRDRKFQAILPLRGK 480 Query: 481 VLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTL 540 VLNVEK+R+EKMLSSEQITTLIATLGTSIG DEFN DKLRYHRIIIMTDADVDGAHIRTL Sbjct: 481 VLNVEKSRYEKMLSSEQITTLIATLGTSIGPDEFNIDKLRYHRIIIMTDADVDGAHIRTL 540 Query: 541 LLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPA 600 LLTLFYRQMP LVERG++YIAQPPLYK+K GKDERYLKDD EEA +MM IAL A + P Sbjct: 541 LLTLFYRQMPQLVERGYVYIAQPPLYKIKNGKDERYLKDDLEEANHMMSIALQGASLTPR 600 Query: 601 EDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAE 660 E A I GE L E+A Q+ A II R++R ID L AIM G L ++++E+A +A Sbjct: 601 EGAEPIAGEQLKEMADQHTIAYNIIQRISRMIDMDVLSAIMNGA-KLNLNSMEEAEQSAR 659 Query: 661 ELKKAINDINIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLSTAAET 720 L K IND ++V +E+ + +AL + + +GN T +D DFV G DY+ L A Sbjct: 660 SLAKIINDPTVEVNVENNENGD-IALSVIKTHYGNAHVTRLDKDFVYGNDYRTLEKTATA 718 Query: 721 FKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLGEMNPEQLWE 780 F LI GA + RG+G++ ++ + +F Q M WLR EAERG++KQRYKGLGEMNP+QLWE Sbjct: 719 FLNLIGPGAMITRGEGDRMRQLAVKNFHQAMQWLRSEAERGISKQRYKGLGEMNPDQLWE 778 Query: 781 TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 TTMDPT+RRLLKV+IEDAI ADQIF TLMGD+VEPRRAFIE++AL AGNIDV Sbjct: 779 TTMDPTMRRLLKVKIEDAITADQIFTTLMGDNVEPRRAFIENHALLAGNIDV 830 >D8NSJ8.1 D8NSJ8_RALSO DNA gyrase subunit B EC=5.99.1.3 Length = 838 Score = 1232 bits (3187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 618/836 (73%), Positives = 701/836 (83%), Gaps = 23/836 (2%) Query: 13 QQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGYCSEIHV 72 + SYGA+SIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAG+C+EIHV Sbjct: 10 ENSYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGHCTEIHV 69 Query: 73 TIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVSGGLHG 132 TIH DNSIS+TDNGRGIPTG+K DDKHEPKRSAAEIVMTELHAGGKFDQNSYKVSGGLHG Sbjct: 70 TIHTDNSISVTDNGRGIPTGIKFDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVSGGLHG 129 Query: 133 VGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDG-----VQVSPIKVIGES 187 VGVSCVN LSK LKLT+RRDG+VH M+FA+GI QNR LE + V+VSP++V G + Sbjct: 130 VGVSCVNGLSKWLKLTVRRDGRVHHMDFARGIPQNRLLEQAEAPDGKMVEVSPLRVSGTT 189 Query: 188 DKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEEDFAFEGG 247 DKRGTEVHF ADEEIFT+VE+HYEIL+KRIRELSFLNNGVHIKLTDQRTGKEEDFAF GG Sbjct: 190 DKRGTEVHFLADEEIFTNVEYHYEILSKRIRELSFLNNGVHIKLTDQRTGKEEDFAFSGG 249 Query: 248 TRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCFTNNIPQR 307 +GFVEYINKNK++L+PT+F ATGEK + V+VSMQWND FNEQVLCFTNNIPQR Sbjct: 250 VKGFVEYINKNKTVLHPTVFNATGEKDG-----VGVEVSMQWNDGFNEQVLCFTNNIPQR 304 Query: 308 DGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPEPKFSSQT 367 DGGTHLTGLRAAMTRVINKYI +N++AKKAKVE SGDDMREGLTCVLSVKVPEPKFSSQT Sbjct: 305 DGGTHLTGLRAAMTRVINKYIADNEIAKKAKVETSGDDMREGLTCVLSVKVPEPKFSSQT 364 Query: 368 KDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKARELTRRKG 427 KDKLVSSEVR PVEE+VAK LTDFL E PNDAKIICGKIVEAARAREAARKARE+TRRKG Sbjct: 365 KDKLVSSEVRLPVEEMVAKALTDFLLETPNDAKIICGKIVEAARAREAARKAREMTRRKG 424 Query: 428 VMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKA 487 V+DG+GL KLADCQE+DPAL EL+IVEGDSAGGSAKQGRDRKFQAILPL+GK+LNVE+A Sbjct: 425 VLDGMGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVERA 484 Query: 488 RFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTLLLTLFYR 547 RF+KMLSS+++ TLI +GT IG D++N DKLRYHRIIIMTDADVDG+HIRTLLLT FYR Sbjct: 485 RFDKMLSSQEVLTLITAMGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRTLLLTFFYR 544 Query: 548 QMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPAEDAPAIT 607 QMPA++ERGH+YIAQPPLYK+K GK+ERY+KDD E A Y+M+ AL+ A + A D I Sbjct: 545 QMPAIIERGHVYIAQPPLYKIKHGKEERYIKDDVEMAAYLMRQALDTAILVRA-DGTEIA 603 Query: 608 GEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAEELKKAIN 667 +AL ELARQY + A+I RL+R ID AL AI GV L + + A A+A+ LK + Sbjct: 604 SDALAELARQYQFSRAVIERLSRVIDADALRAIAE-GVALDLSSEAGAEASAKALKARLL 662 Query: 668 DI-----------NIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDYQVLST 716 ++ D + DE EK + + RRQHGN + + IDADFV+G DY LS Sbjct: 663 EMQGNASSANGGATADAFMQYDEKHEKYRVMVVRRQHGNQRLSHIDADFVAGADYATLSQ 722 Query: 717 AAETFKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLGEMNPE 776 A+TF+GLI +GA V RG G+K++E +TDF + WL EAERG+++QRYKGLGEMNP Sbjct: 723 TAQTFQGLIGEGAKVRRGTGDKQREQGVTDFHAAITWLLGEAERGISRQRYKGLGEMNPS 782 Query: 777 QLWETTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNIDV 832 QLWETTMD T RRLLKVQIEDAIAADQIF TLMGDDVEPRR FIESNAL A NIDV Sbjct: 783 QLWETTMDVTQRRLLKVQIEDAIAADQIFTTLMGDDVEPRRNFIESNALVARNIDV 838 >Q8XTV6.1 Q8XTV6_RALSO DNA gyrase subunit B EC=5.99.1.3 Length = 842 Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 617/841 (73%), Positives = 700/841 (83%), Gaps = 23/841 (2%) Query: 8 NTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGYC 67 +T + SYGA+SIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAG+C Sbjct: 9 STPAESSSYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGHC 68 Query: 68 SEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVS 127 +EIHVTIH DNSIS+ DNGRGIPTG+K DDKHEPKRSAAEIVMTELHAGGKFDQNSYKVS Sbjct: 69 TEIHVTIHTDNSISVIDNGRGIPTGIKFDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVS 128 Query: 128 GGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDG-----VQVSPIK 182 GGLHGVGVSCVN LSK LKLT+RRDG+VH MEFA+GI QNR LE + V+VSP++ Sbjct: 129 GGLHGVGVSCVNGLSKWLKLTVRRDGRVHHMEFARGIPQNRLLEPAEAPDGKTVEVSPLR 188 Query: 183 VIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEEDF 242 V G +DKRGTEVHF ADEEIFT+VE+HYEIL+KRIRELSFLNNGVHIKLTDQRTGKEEDF Sbjct: 189 VSGTTDKRGTEVHFLADEEIFTNVEYHYEILSKRIRELSFLNNGVHIKLTDQRTGKEEDF 248 Query: 243 AFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCFTN 302 AF GG +GFVEYINKNK++L+PT+F ATGEK + V+VSMQWND FNEQVLCFTN Sbjct: 249 AFSGGVKGFVEYINKNKTVLHPTVFNATGEKDG-----VGVEVSMQWNDGFNEQVLCFTN 303 Query: 303 NIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPEPK 362 NIPQRDGGTHLTGLRAAMTRVINKYI +N++AKKAKVE SGDDMREGLTCVLSVKVPEPK Sbjct: 304 NIPQRDGGTHLTGLRAAMTRVINKYIADNEIAKKAKVETSGDDMREGLTCVLSVKVPEPK 363 Query: 363 FSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAREL 422 FSSQTKDKLVSSEVR PVEE+VAK L DFL E PNDAKIICGKIVEAARAREAARKARE+ Sbjct: 364 FSSQTKDKLVSSEVRLPVEEVVAKALADFLLETPNDAKIICGKIVEAARAREAARKAREM 423 Query: 423 TRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVL 482 TRRKGV+DG+GL KLADCQE+DPAL EL+IVEGDSAGGSAKQGRDRKFQAILPL+GK+L Sbjct: 424 TRRKGVLDGMGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRDRKFQAILPLKGKIL 483 Query: 483 NVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTLLL 542 NVE+ARF+KMLSS+++ TLI +GT IG D++N DKLRYHRIIIMTDADVDG+HIRTLLL Sbjct: 484 NVERARFDKMLSSQEVLTLITAMGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRTLLL 543 Query: 543 TLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPAED 602 T FYRQMP ++ERGH+YIAQPPLYK+K GK+ERY+KDD E A Y+M+ AL+ A + A D Sbjct: 544 TFFYRQMPEIIERGHVYIAQPPLYKIKHGKEERYIKDDVEMAAYLMRQALDTAILVRA-D 602 Query: 603 APAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAEEL 662 I +AL ELARQY + A+I RL+R ID AL AI GV L + + A A+A+ L Sbjct: 603 GTEIASDALAELARQYQFSRAVIERLSRVIDADALRAIAE-GVALDLSSEAGAEASAKAL 661 Query: 663 KKAINDI-----------NIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDY 711 K + ++ D + DE EK + + RRQHGN + + IDADFV+G DY Sbjct: 662 KARLLEMQGNASSANGGATADAFMQYDEKHEKYRVMVVRRQHGNQRLSHIDADFVAGADY 721 Query: 712 QVLSTAAETFKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLG 771 LS A+TF+GLI +GA V RG G+K++E +TDF + WL EAERG+++QRYKGLG Sbjct: 722 ATLSQTAQTFQGLIGEGAKVRRGTGDKQREQGVTDFHAAITWLLGEAERGISRQRYKGLG 781 Query: 772 EMNPEQLWETTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNID 831 EMNP QLWETTMD T RRLLKVQIEDAIAADQIF TLMGDDVEPRR FIESNAL A NID Sbjct: 782 EMNPSQLWETTMDVTQRRLLKVQIEDAIAADQIFTTLMGDDVEPRRNFIESNALVARNID 841 Query: 832 V 832 V Sbjct: 842 V 842 >D8ND75.1 D8ND75_RALSO DNA gyrase subunit B EC=5.99.1.3 Length = 842 Score = 1218 bits (3151), Expect = 0.0, Method: Compositional matrix adjust. Identities = 619/846 (73%), Positives = 706/846 (83%), Gaps = 28/846 (3%) Query: 3 TSPADNTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEA 62 ++PA+++ SYGA+SIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEA Sbjct: 9 STPAESS-----SYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEA 63 Query: 63 LAGYCSEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFDQN 122 LAG+C+EIHVTIH DNSIS+ DNGRGIPTG+K DDKHEPKRSAAEIVMTELHAGGKFDQN Sbjct: 64 LAGHCTEIHVTIHTDNSISVIDNGRGIPTGIKFDDKHEPKRSAAEIVMTELHAGGKFDQN 123 Query: 123 SYKVSGGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDG-----VQ 177 SYKVSGGLHGVGVSCVN LSK LKLT+RRDGKVH MEFA+GI QNR LE + V+ Sbjct: 124 SYKVSGGLHGVGVSCVNGLSKWLKLTVRRDGKVHNMEFARGIPQNRLLEQAEAPDGKMVE 183 Query: 178 VSPIKVIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTG 237 VSP+++ G +DKRGTEVHF ADEEIFT+VE+HYEIL+KRIRELSFLNNGVHIKLTDQRTG Sbjct: 184 VSPLRMSGTTDKRGTEVHFLADEEIFTNVEYHYEILSKRIRELSFLNNGVHIKLTDQRTG 243 Query: 238 KEEDFAFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQV 297 KEE+FAF GG +GFVEYINKNKS+L+PTIF ATGEK + V+VSMQWND FNEQV Sbjct: 244 KEENFAFSGGVKGFVEYINKNKSVLHPTIFYATGEKDG-----VGVEVSMQWNDGFNEQV 298 Query: 298 LCFTNNIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVK 357 LCFTNNIPQRDGGTHLTGLRAAMTRVINKYI +N++AKKAKVE SGDDMREGLTCVLSVK Sbjct: 299 LCFTNNIPQRDGGTHLTGLRAAMTRVINKYIADNEIAKKAKVETSGDDMREGLTCVLSVK 358 Query: 358 VPEPKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAAR 417 VPEPKFSSQTKDKLVSSEVR PVEEIV+K L DFL E PNDAKIICGKIVEAARAREAAR Sbjct: 359 VPEPKFSSQTKDKLVSSEVRLPVEEIVSKVLNDFLLETPNDAKIICGKIVEAARAREAAR 418 Query: 418 KARELTRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPL 477 KARE+TRRKGV+DG+GL KLADCQE+DPAL EL+IVEGDSAGGSAKQGRDRKFQAILPL Sbjct: 419 KAREMTRRKGVLDGMGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRDRKFQAILPL 478 Query: 478 RGKVLNVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHI 537 +GK+LNVE+ARF+KMLSS+++ TLI +GT IG D++N DKLRYHRIIIMTDADVDG+HI Sbjct: 479 KGKILNVERARFDKMLSSQEVLTLITAMGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHI 538 Query: 538 RTLLLTLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEI 597 RTLLLT FYRQMP ++ERGH+YIAQPPLYK+K GK+ERY+KDD E A Y+M+ AL+ A + Sbjct: 539 RTLLLTFFYRQMPEIIERGHVYIAQPPLYKIKHGKEERYIKDDNEMAAYLMRQALDTAIL 598 Query: 598 KPAEDAPAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATA 657 A D I +AL ELARQY + A+I RL+R ID AL AI GV L + + A A Sbjct: 599 VRA-DGTEIASDALAELARQYQFSRAVIERLSRVIDADALRAIAE-GVALDLSSEAAADA 656 Query: 658 TAE-------ELKKAINDIN----IDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFV 706 +A+ E++ ++ N D + DE EK + + RRQHGN + + IDADFV Sbjct: 657 SAKALKARLLEMQGNASNANGGATADAFMQYDEKHEKYRVMVVRRQHGNQRLSHIDADFV 716 Query: 707 SGPDYQVLSTAAETFKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQR 766 +G DY LS A+TF+GLI +GA V RG G+K++E +TDF + WL EAERG+++QR Sbjct: 717 AGADYATLSQTAQTFQGLIGEGAKVRRGTGDKQREQAVTDFHAAITWLLAEAERGISRQR 776 Query: 767 YKGLGEMNPEQLWETTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQ 826 YKGLGEMNPEQLWETTMD T RRLLKVQIEDAIAADQIF TLMGDDVEPRR FIE+NAL Sbjct: 777 YKGLGEMNPEQLWETTMDVTQRRLLKVQIEDAIAADQIFTTLMGDDVEPRRNFIETNALV 836 Query: 827 AGNIDV 832 A NIDV Sbjct: 837 ARNIDV 842 >B5SE25.1 B5SE25_RALSO DNA gyrase subunit B EC=5.99.1.3 Length = 842 Score = 1215 bits (3144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 614/841 (73%), Positives = 698/841 (82%), Gaps = 23/841 (2%) Query: 8 NTNSAQQSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGYC 67 +T + SYGA+SIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAG+C Sbjct: 9 STPAESSSYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGHC 68 Query: 68 SEIHVTIHADNSISITDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVS 127 +EIHVTIH DNSIS+ DNGRGIPTG+K DDKHEPKRSAAEIVMTELHAGGKFDQNSYKVS Sbjct: 69 TEIHVTIHTDNSISVIDNGRGIPTGIKFDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVS 128 Query: 128 GGLHGVGVSCVNALSKKLKLTIRRDGKVHAMEFAKGIVQNRELEMVDG-----VQVSPIK 182 GGLHGVGVSCVN LSK LKLT+RRDGKVH M+FA+GI QNR LE + V+VSP++ Sbjct: 129 GGLHGVGVSCVNGLSKWLKLTVRRDGKVHHMDFARGIPQNRLLEQAEAPDGKMVEVSPLR 188 Query: 183 VIGESDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKEEDF 242 G +DKRGTEVHF ADEEIFT+VE+HYEIL+KRIRELSFLNNGVHIKLTDQRTGKEEDF Sbjct: 189 TSGTTDKRGTEVHFLADEEIFTNVEYHYEILSKRIRELSFLNNGVHIKLTDQRTGKEEDF 248 Query: 243 AFEGGTRGFVEYINKNKSILNPTIFQATGEKQSDQGTMITVDVSMQWNDAFNEQVLCFTN 302 AF GG +GFVEYINKNK++L+PT+F A GEK + V+VSMQWND FNEQVLCFTN Sbjct: 249 AFSGGVKGFVEYINKNKTVLHPTVFNAQGEKDG-----VGVEVSMQWNDGFNEQVLCFTN 303 Query: 303 NIPQRDGGTHLTGLRAAMTRVINKYIEENDLAKKAKVEISGDDMREGLTCVLSVKVPEPK 362 NIPQRDGGTHLTGLRAAMTRVINKYI +N++AKKAKVE SGDDMREGL CVLSVKVPEPK Sbjct: 304 NIPQRDGGTHLTGLRAAMTRVINKYIADNEIAKKAKVETSGDDMREGLACVLSVKVPEPK 363 Query: 363 FSSQTKDKLVSSEVRGPVEEIVAKTLTDFLAEKPNDAKIICGKIVEAARAREAARKAREL 422 FSSQTKDKLVSSEVR PVEE+VAK LTDFL E PNDAKIICGKIVEAARAREAARKARE+ Sbjct: 364 FSSQTKDKLVSSEVRLPVEEVVAKALTDFLLETPNDAKIICGKIVEAARAREAARKAREM 423 Query: 423 TRRKGVMDGLGLSSKLADCQERDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVL 482 TRRKGV+DG+GL KLADCQE+DPAL EL+IVEGDSAGGSAKQGRDRKFQAILPL+GK+L Sbjct: 424 TRRKGVLDGMGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRDRKFQAILPLKGKIL 483 Query: 483 NVEKARFEKMLSSEQITTLIATLGTSIGADEFNPDKLRYHRIIIMTDADVDGAHIRTLLL 542 NVE+ARF+KMLSS+++ TLI +GT IG D++N DKLRYHRIIIMTDADVDG+HIRTLLL Sbjct: 484 NVERARFDKMLSSQEVLTLITAMGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRTLLL 543 Query: 543 TLFYRQMPALVERGHIYIAQPPLYKVKAGKDERYLKDDFEEAQYMMQIALNDAEIKPAED 602 T FYRQMP ++ERGH+YIAQPPLYK+K GK+ERY+KDD E A Y+M+ AL+ A + A D Sbjct: 544 TFFYRQMPEIIERGHVYIAQPPLYKIKHGKEERYIKDDNEMAAYLMRQALDTALLVRA-D 602 Query: 603 APAITGEALVELARQYNTANAIIMRLTRAIDESALDAIMTGGVVLKMDNLEQATATAEEL 662 I +AL ELARQY + A+I RL+R ID AL AI GV L + + A A+A+ L Sbjct: 603 GTEIASDALAELARQYQFSRAVIERLSRVIDADALRAIAE-GVALDLSSEAAAEASAQAL 661 Query: 663 KKAINDI-----------NIDVQARMDEHSEKVALHIHRRQHGNIKATVIDADFVSGPDY 711 K + ++ D + DE EK + + RRQHGN + + IDADFV+G DY Sbjct: 662 KARLLEMQGNASSANGGATADAFMQYDEKHEKYRVMVVRRQHGNQRLSHIDADFVAGADY 721 Query: 712 QVLSTAAETFKGLIRKGATVARGQGEKRKESVITDFRQDMAWLRDEAERGVNKQRYKGLG 771 LS A+TF+GLI +GA V RG G+K++E +TDF + WL EAERG+++QRYKGLG Sbjct: 722 ATLSQTAQTFQGLIGEGAKVRRGTGDKQREQAVTDFHAAITWLLAEAERGISRQRYKGLG 781 Query: 772 EMNPEQLWETTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIESNALQAGNID 831 EMNP QLWETTMD T RRLLKVQIEDAIAADQIF TLMGDDVEPRR FIE+NAL A NID Sbjct: 782 EMNPGQLWETTMDVTQRRLLKVQIEDAIAADQIFTTLMGDDVEPRRNFIETNALVARNID 841 Query: 832 V 832 V Sbjct: 842 V 842