BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0395.p (158 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IY22.1 D8IY22_HERSS Protein smg homolog 319 7e-86 A6SU83.1 SMG_JANMA Protein smg homolog 263 7e-69 A4G1G4.2 SMG_HERAR Protein smg homolog 245 2e-63 F1W3L5.1 F1W3L5_9BURK Putative uncharacterized protein 242 2e-62 B1XW95.1 SMG_LEPCP Protein smg homolog 162 1e-38 D6CKE8.1 D6CKE8_THIS3 Protein smg homolog 152 2e-35 D5X300.1 D5X300_THIK1 Protein smg homolog 152 2e-35 A2SCF3.1 SMG_METPP Protein smg homolog 151 3e-35 E5UFE1.1 E5UFE1_ALCXX Protein smg homolog 149 1e-34 E3HN17.1 E3HN17_ACHXA Protein smg homolog 148 3e-34 >D8IY22.1 D8IY22_HERSS Protein smg homolog Length = 158 Score = 319 bits (818), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 158/158 (100%), Positives = 158/158 (100%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP Sbjct: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE Sbjct: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH Sbjct: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 >A6SU83.1 SMG_JANMA Protein smg homolog Length = 158 Score = 263 bits (672), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 124/158 (78%), Positives = 143/158 (90%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFDVLVYLYETYYRPDACP+ EALVKKLSAIGFEE+EI++ALGWLT L +E +D+YP Sbjct: 1 MFDVLVYLYETYYRPDACPDSEALVKKLSAIGFEEEEIAKALGWLTALAETTNELSDSYP 60 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 QTAFSFG RIYA QE DVLG A+GFIQFLESAK+++P+QREIVIERALAAGE+P+ LE Sbjct: 61 HQTAFSFGIRIYATQEMDVLGTPAVGFIQFLESAKLINPVQREIVIERALAAGESPISLE 120 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 KLKVIVLMVLWSQGKEPDGL+F+ELF+D+EDA PR+LH Sbjct: 121 KLKVIVLMVLWSQGKEPDGLIFDELFVDDEDAPPRMLH 158 >A4G1G4.2 SMG_HERAR Protein smg homolog Length = 158 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 123/158 (77%), Positives = 143/158 (90%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFDVLVYLYETYYRPDACP+ EALVKKLSA+GFEE+EI++ALGWLT L +E +D+YP Sbjct: 1 MFDVLVYLYETYYRPDACPDSEALVKKLSAVGFEEEEITKALGWLTALAETTNELSDSYP 60 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 QTAFSFGTRIY QE+DVLG A+GFIQFLE+AK+++PIQREIVIERALAAGE P+ LE Sbjct: 61 HQTAFSFGTRIYVSQETDVLGTPAVGFIQFLEAAKLINPIQREIVIERALAAGETPISLE 120 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 KLKVIVLMVLWSQGKEPDGL+F+ELFLD++DA PR+LH Sbjct: 121 KLKVIVLMVLWSQGKEPDGLIFDELFLDDDDAAPRILH 158 >F1W3L5.1 F1W3L5_9BURK Putative uncharacterized protein Length = 158 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 115/158 (72%), Positives = 131/158 (82%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFDVLVYLYETYYRPDACP P ALVKKLSAIGF++DEI+ AL WLTDL A YP Sbjct: 1 MFDVLVYLYETYYRPDACPPPAALVKKLSAIGFDDDEITSALDWLTDLAQTTTTLAGQYP 60 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 +Q AFSFGTRIY +QE D LG A+GFIQFLE+AK+L+P+QREIVIERALA + L+ Sbjct: 61 QQAAFSFGTRIYVQQEMDALGTAAVGFIQFLEAAKLLNPVQREIVIERALAVSGTLISLD 120 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 KLKVIVLMVLWSQGKEPDGLMF+ELFLD+++ EPR LH Sbjct: 121 KLKVIVLMVLWSQGKEPDGLMFDELFLDDDEPEPRQLH 158 >B1XW95.1 SMG_LEPCP Protein smg homolog Length = 150 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 86/158 (54%), Positives = 108/158 (68%), Gaps = 8/158 (5%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFDVLVYLYE Y+RPDACP+ + L KKLSA+GFE +EI+ AL WL L A + Sbjct: 1 MFDVLVYLYENYWRPDACPDHDQLSKKLSAVGFESEEIADALTWLDGLAGAAES---HIG 57 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 Q+ S R+Y+ E D LG+ +I FI FLESA +L P REI ++RA+A G PV LE Sbjct: 58 TQSELSL--RVYSPSEQDHLGLASIAFISFLESAGVLPPAMREIAVDRAMALGGGPVALE 115 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 LK+IVLMV WS G+EPD L+ +ELF+D ED RL+H Sbjct: 116 DLKIIVLMVFWSLGEEPDALILDELFVDAED---RLIH 150 >D6CKE8.1 D6CKE8_THIS3 Protein smg homolog Length = 152 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/158 (50%), Positives = 109/158 (68%), Gaps = 6/158 (3%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFD+L+YLYE+Y+ P+ACPE L +KLSA GFE DEI +A+ WL L+ A + Sbjct: 1 MFDILMYLYESYWHPEACPEFGQLTRKLSAAGFESDEIHEAIDWLRGLDSAVGGLKTQH- 59 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 Q+A + R+YA+QE D LG+EAIG++ FLESA +L P RE+ IERALA G P+ LE Sbjct: 60 EQSAHAI--RLYAQQELDCLGLEAIGYLNFLESAGVLKPHLRELTIERALATGMQPLPLE 117 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 LK IVL++ W +EPD L+ +ELF++ ED R++H Sbjct: 118 HLKTIVLLIFWRLDEEPDALILDELFVEAED---RVVH 152 >D5X300.1 D5X300_THIK1 Protein smg homolog Length = 152 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/158 (50%), Positives = 109/158 (68%), Gaps = 6/158 (3%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFD+L+YLYE+Y+ P+ACPE L +KLSA GFE DEI +A+ WL L+ A + Sbjct: 1 MFDILMYLYESYWHPEACPEFGQLTRKLSAAGFESDEIHEAIDWLRGLDSAVGGLKTQH- 59 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 Q+A + R+YA+QE D LG+EAIG++ FLESA +L P RE+ IERALA G P+ LE Sbjct: 60 EQSAHAI--RLYAQQELDCLGLEAIGYLNFLESAGVLKPHLRELTIERALATGMQPLPLE 117 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 LK IVL++ W +EPD L+ +ELF++ ED R++H Sbjct: 118 HLKTIVLLIFWRLDEEPDALILDELFVEAED---RVVH 152 >A2SCF3.1 SMG_METPP Protein smg homolog Length = 150 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 80/158 (50%), Positives = 107/158 (67%), Gaps = 8/158 (5%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFDVLVYLYE Y++PDACP+ L +KLSA+GFE +EI AL WL L A + Sbjct: 1 MFDVLVYLYENYWQPDACPDHRQLSRKLSAVGFENEEIEDALSWLDGLATAAESHSGE-- 58 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 Q+A + R+Y+ E + LG +IGF+ FLESA +L RE+VI+RA+A P+ +E Sbjct: 59 -QSAHAL--RVYSPMEQEHLGEASIGFVSFLESAGVLRAPMREMVIDRAMAIPAGPLAVE 115 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 LK+IVLMV WS G+EPD L+ +ELF+D+ED RL+H Sbjct: 116 DLKIIVLMVFWSLGEEPDALILDELFVDDED---RLIH 150 >E5UFE1.1 E5UFE1_ALCXX Protein smg homolog Length = 152 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/158 (54%), Positives = 101/158 (63%), Gaps = 6/158 (3%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFD+LVYLYE YY P ACP + L K+L+A GFE ++I ALGWL L D Sbjct: 1 MFDILVYLYENYYTPQACPAADVLAKRLAAAGFEHEDIDDALGWLYGLAETTERCVD--- 57 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 A + GTRIY E LG E+IGFI FLESA +L REIVI+R LAA E+PV L Sbjct: 58 LAQAPTTGTRIYTDNEYQQLGSESIGFIAFLESAGVLPAPLREIVIDRGLAAPESPVPLS 117 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 K+K+I LMVLWSQ E D L+ EEL LDE+ RLLH Sbjct: 118 KIKIIALMVLWSQEAEIDNLVLEEL-LDEDGT--RLLH 152 >E3HN17.1 E3HN17_ACHXA Protein smg homolog Length = 152 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 85/158 (53%), Positives = 100/158 (63%), Gaps = 6/158 (3%) Query: 1 MFDVLVYLYETYYRPDACPEPEALVKKLSAIGFEEDEISQALGWLTDLEVANHEFADNYP 60 MFD+LVYLYE YY P ACP + L K+L+A GFE ++I ALGWL L D Sbjct: 1 MFDILVYLYENYYTPQACPAADVLAKRLAAAGFEHEDIDDALGWLYGLAETTERCVD--- 57 Query: 61 RQTAFSFGTRIYARQESDVLGVEAIGFIQFLESAKMLDPIQREIVIERALAAGEAPVGLE 120 A + GTRIY E LG E+IGFI FLESA +L REIVI+R LA+ E PV L Sbjct: 58 LAQAPATGTRIYTDNEYQQLGTESIGFIAFLESAGVLPAPLREIVIDRGLASPETPVPLS 117 Query: 121 KLKVIVLMVLWSQGKEPDGLMFEELFLDEEDAEPRLLH 158 K+K+I LMVLWSQ E D L+ EEL LDE+ RLLH Sbjct: 118 KIKIIALMVLWSQEAEIDNLVLEEL-LDEDGV--RLLH 152