BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0342.p (448 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXX8.1 D8IXX8_HERSS Two component response regulator protein 874 0.0 A9BTD2.1 A9BTD2_DELAS Two component, sigma54 specific, transcrip... 580 e-163 B1KB41.1 B1KB41_BURCC Two component, sigma54 specific, transcrip... 458 e-127 Q1BG96.1 Q1BG96_BURCA Two component, sigma54 specific, transcrip... 457 e-126 A0KE50.1 A0KE50_BURCH Two component, sigma54 specific, transcrip... 457 e-126 F0Q1Z9.1 F0Q1Z9_ACIAP Two component, sigma54 specific, transcrip... 451 e-125 A1TIJ6.1 A1TIJ6_ACIAC Sigma54 specific transcriptional regulator... 449 e-124 E6VAG6.1 E6VAG6_VARPD Two component, sigma54 specific, transcrip... 446 e-123 Q5GV17.1 Q5GV17_XANOR Two-component system regulatory protein 445 e-123 Q2NYA1.1 Q2NYA1_XANOM Two-component system regulatory protein 445 e-123 >D8IXX8.1 D8IXX8_HERSS Two component response regulator protein Length = 448 Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/448 (98%), Positives = 442/448 (98%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIIDLRMPDEDG 60 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAI+DLRMPDEDG Sbjct: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIVDLRMPDEDG 60 Query: 61 LAFLQRAPAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERALRQGA 120 LAFLQRAPAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERALRQGA Sbjct: 61 LAFLQRAPAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERALRQGA 120 Query: 121 SAPAAASPATEERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGKELVARALHRK 180 S PAAASPATEERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGKELVARALHR Sbjct: 121 STPAAASPATEERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGKELVARALHRN 180 Query: 181 GARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGGTLFLDEIGDM 240 GARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGGTLFLDEIGDM Sbjct: 181 GARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGGTLFLDEIGDM 240 Query: 241 ELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFREDLWYRLQVL 300 ELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFREDLWYRLQVL Sbjct: 241 ELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFREDLWYRLQVL 300 Query: 301 TIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPGNVRELRNTMERA 360 TIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPGNVRELRNTMERA Sbjct: 301 TIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPGNVRELRNTMERA 360 Query: 361 AVMSHGLCIEAEDIGLSARHPVGAAGAASAPAIDWDGPLAAALAEVERVMIERALQGAAG 420 AVMSHGLCIEAEDIGLSAR P GAA AASAPAIDWDGPLA ALAEVERVMIERALQGAAG Sbjct: 361 AVMSHGLCIEAEDIGLSARPPAGAASAASAPAIDWDGPLAVALAEVERVMIERALQGAAG 420 Query: 421 NRAEAARRLGISRQQLYRRLEEAGKSHD 448 NRAEAARRLGISRQQLYRRLEEAGKSHD Sbjct: 421 NRAEAARRLGISRQQLYRRLEEAGKSHD 448 >A9BTD2.1 A9BTD2_DELAS Two component, sigma54 specific, transcriptional regulator, Fis family Length = 448 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 305/453 (67%), Positives = 355/453 (78%), Gaps = 16/453 (3%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIIDLRMPDEDG 60 MARILIVDDD AFR SLAE + DLGH V A + AAGL++L +VD AI+DLRMP EDG Sbjct: 1 MARILIVDDDTAFRESLAEMLGDLGHAVSAAPTVAAGLQVLQGGSVDVAIVDLRMPGEDG 60 Query: 61 LAFLQRAPAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERAL---- 116 LAFL++A ++ PCIMLTAYASG NTIEA+RLGAFDHLTKP+ R +LVE LERAL Sbjct: 61 LAFLRKARGLSRAPCIMLTAYASGSNTIEAMRLGAFDHLTKPIARTSLVEVLERALLSAG 120 Query: 117 RQGASAPAAASPATEERNQ-----LVGESEAMRQVFKQIGRAATSDATVLVLGETGTGKE 171 + G+ AA +PA + + LV SEAMRQVFK+IG AA SDATVLVLGETGTGKE Sbjct: 121 QAGSPENAAQNPAQNQEPEGDDAELVSGSEAMRQVFKRIGLAADSDATVLVLGETGTGKE 180 Query: 172 LVARALHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGGT 231 LVARALHR ARA RPFVAVNCAAIPA+L+ESELFGHVKGAF+GA S R GRF+EA GGT Sbjct: 181 LVARALHRNSARAERPFVAVNCAAIPADLMESELFGHVKGAFTGAASDRAGRFREAQGGT 240 Query: 232 LFLDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFRE 291 LFLDE+GDM L TQAKILR LQERE+TPVG ++++ V+VR+IAATHRDL + +GRFRE Sbjct: 241 LFLDEVGDMPLPTQAKILRALQEREITPVGASRALPVNVRIIAATHRDLPAAVKEGRFRE 300 Query: 292 DLWYRLQVLTIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPGNVR 351 DLWYRLQV+ + +P LRER GD+L +AEHFLRQ GG +PKR+ AA+LLL H WPGNVR Sbjct: 301 DLWYRLQVVPVHLPPLRERLGDVLLLAEHFLRQGGGASPKRLGADAAQLLLAHDWPGNVR 360 Query: 352 ELRNTMERAAVMSHGLCIEAEDIGLSARHPVGAAGAASAPAIDWDGPLAAALAEVERVMI 411 ELRN MERAA++ G I AE IGL AA PAIDW+GPLAAA+A++ER M+ Sbjct: 361 ELRNAMERAALLCPGPVIGAEHIGLQ-------PAAAHGPAIDWNGPLAAAVAQLEREMV 413 Query: 412 ERALQGAAGNRAEAARRLGISRQQLYRRLEEAG 444 RAL A GNRAEAARRLG+SRQQLYR+L E G Sbjct: 414 TRALAAATGNRAEAARRLGLSRQQLYRKLAEFG 446 >B1KB41.1 B1KB41_BURCC Two component, sigma54 specific, transcriptional regulator, Fis family Length = 458 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 258/460 (56%), Positives = 316/460 (68%), Gaps = 15/460 (3%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLL-AAHAVDAAIIDLRMPDED 59 MA ILIVDDDAAFR LAET++DLGH +EA S A L L ++ +D R+PD D Sbjct: 1 MANILIVDDDAAFRDGLAETLADLGHRAVEAASGRAALSALRDGGGIECVFLDFRLPDLD 60 Query: 60 GLAFLQRA---PAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERAL 116 GLA L + PA+AAIP +MLTA+A+ DNTIEA+RLGAFDHLTKP+ R + + LER + Sbjct: 61 GLAVLAQLRDDPALAAIPVVMLTAHATSDNTIEAMRLGAFDHLTKPIGRRDIAQLLERIV 120 Query: 117 RQGASAPAAASPA--------TEERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGT 168 A+ P A +P+ + +R +L+G S AMR V KQIGRAA SDATVL+ GETGT Sbjct: 121 --SANQPPAPAPSDSGFAGEPSADRPRLLGVSAAMRDVQKQIGRAAMSDATVLLTGETGT 178 Query: 169 GKELVARALHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEAD 228 GKE+ AR LH AR A PFVAVNCAAIPA+L+ESELFGH +GAF+GA + R GR EAD Sbjct: 179 GKEVAARVLHAASARHAGPFVAVNCAAIPADLLESELFGHRRGAFTGAHADRAGRLVEAD 238 Query: 229 GGTLFLDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGR 288 GGTLFLDEIGDM A QAK+LR LQER++TP+G +++ +D+RV+AATHRDL + G Sbjct: 239 GGTLFLDEIGDMPAAMQAKLLRALQERQVTPLGADRATVIDIRVVAATHRDLAAAVADGT 298 Query: 289 FREDLWYRLQVLTIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPG 348 FREDL+YRL V+ + +P L ER DIL +A HFL G ++ A R LL H WPG Sbjct: 299 FREDLFYRLNVIPLHLPPLAERVADILPLAAHFLGSAAGMRALHLTNDAQRALLDHRWPG 358 Query: 349 NVRELRNTMERAAVMSHGLCIEAEDIGLSARHPVGAAGAASAPAIDWDGPLAAALAEVER 408 NVRELRN MERAA ++ G + A D+GL A P +GA + PA D PL ALA VER Sbjct: 359 NVRELRNVMERAAALAPGPAVSAADLGLGAV-PARQSGADAVPAHLLDMPLPDALATVER 417 Query: 409 VMIERALQGAAGNRAEAARRLGISRQQLYRRLEEAGKSHD 448 I AL+ A GNRAEAAR+LGI RQ LY R+ G D Sbjct: 418 AAILHALERANGNRAEAARQLGIGRQSLYARMANLGIERD 457 >Q1BG96.1 Q1BG96_BURCA Two component, sigma54 specific, transcriptional regulator, Fis family Length = 458 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 257/460 (55%), Positives = 315/460 (68%), Gaps = 15/460 (3%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLL-AAHAVDAAIIDLRMPDED 59 MA ILIVDDDAAFR LAET++DLGH +EA S A L L ++ +D R+PD D Sbjct: 1 MANILIVDDDAAFRDGLAETLADLGHRAVEAASGRAALSALRDGGGIECVFLDFRLPDLD 60 Query: 60 GLAFLQRA---PAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERAL 116 GLA L + PA+AAIP +MLTA+A+ DNTIEA+RLGAFDHLTKP+ R + + LER + Sbjct: 61 GLAVLAQLRDDPALAAIPVVMLTAHATSDNTIEAMRLGAFDHLTKPIGRRDIAQLLERIV 120 Query: 117 RQGASAPAAASPA--------TEERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGT 168 A+ P A +P+ + +R +L+G S AMR V KQIGRAA SDATVL+ GETGT Sbjct: 121 --SANQPPAPAPSDSGFAGEPSADRPRLLGVSAAMRDVQKQIGRAAMSDATVLLTGETGT 178 Query: 169 GKELVARALHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEAD 228 GKE+ AR LH AR A PFVAVNCAAIPA+L+ESELFGH +GAF+GA + R GR EAD Sbjct: 179 GKEVAARVLHAASARHAGPFVAVNCAAIPADLLESELFGHRRGAFTGAHADRAGRLVEAD 238 Query: 229 GGTLFLDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGR 288 GGTLFLDEIGDM A QAK+LR LQER++ P+G +++ +D+RV+AATHRDL + G Sbjct: 239 GGTLFLDEIGDMPAAMQAKLLRALQERQVMPLGADRATTIDIRVVAATHRDLAAAVANGT 298 Query: 289 FREDLWYRLQVLTIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPG 348 FREDL+YRL V+ + +P L ER DIL +A HFL G ++ A R LL H WPG Sbjct: 299 FREDLFYRLNVIPLHLPPLAERVADILPLAAHFLGSAAGMRALHLTNDAQRALLDHRWPG 358 Query: 349 NVRELRNTMERAAVMSHGLCIEAEDIGLSARHPVGAAGAASAPAIDWDGPLAAALAEVER 408 NVRELRN MERAA ++ G + A D+GL A P +GA + PA D PL ALA VER Sbjct: 359 NVRELRNVMERAAALAPGPAVSAADLGLGAV-PARQSGADAVPAHLLDMPLPDALATVER 417 Query: 409 VMIERALQGAAGNRAEAARRLGISRQQLYRRLEEAGKSHD 448 I AL+ A GNRAEAAR+LGI RQ LY R+ G D Sbjct: 418 AAILHALERANGNRAEAARQLGIGRQSLYARMANLGIERD 457 >A0KE50.1 A0KE50_BURCH Two component, sigma54 specific, transcriptional regulator, Fis family Length = 458 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 257/460 (55%), Positives = 315/460 (68%), Gaps = 15/460 (3%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLL-AAHAVDAAIIDLRMPDED 59 MA ILIVDDDAAFR LAET++DLGH +EA S A L L ++ +D R+PD D Sbjct: 1 MANILIVDDDAAFRDGLAETLADLGHRAVEAASGRAALSALRDGGGIECVFLDFRLPDLD 60 Query: 60 GLAFLQRA---PAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERAL 116 GLA L + PA+AAIP +MLTA+A+ DNTIEA+RLGAFDHLTKP+ R + + LER + Sbjct: 61 GLAVLAQLRDDPALAAIPVVMLTAHATSDNTIEAMRLGAFDHLTKPIGRRDIAQLLERIV 120 Query: 117 RQGASAPAAASPA--------TEERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGT 168 A+ P A +P+ + +R +L+G S AMR V KQIGRAA SDATVL+ GETGT Sbjct: 121 --SANQPPAPAPSDSGFAGEPSADRPRLLGVSAAMRDVQKQIGRAAMSDATVLLTGETGT 178 Query: 169 GKELVARALHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEAD 228 GKE+ AR LH AR A PFVAVNCAAIPA+L+ESELFGH +GAF+GA + R GR EAD Sbjct: 179 GKEVAARVLHAASARHAGPFVAVNCAAIPADLLESELFGHRRGAFTGAHADRAGRLVEAD 238 Query: 229 GGTLFLDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGR 288 GGTLFLDEIGDM A QAK+LR LQER++ P+G +++ +D+RV+AATHRDL + G Sbjct: 239 GGTLFLDEIGDMPAAMQAKLLRALQERQVMPLGADRATTIDIRVVAATHRDLAAAVANGT 298 Query: 289 FREDLWYRLQVLTIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPG 348 FREDL+YRL V+ + +P L ER DIL +A HFL G ++ A R LL H WPG Sbjct: 299 FREDLFYRLNVIPLHLPPLAERVADILPLAAHFLGSAAGMRALHLTNDAQRALLDHRWPG 358 Query: 349 NVRELRNTMERAAVMSHGLCIEAEDIGLSARHPVGAAGAASAPAIDWDGPLAAALAEVER 408 NVRELRN MERAA ++ G + A D+GL A P +GA + PA D PL ALA VER Sbjct: 359 NVRELRNVMERAAALAPGPAVSAADLGLGAV-PARQSGADAVPAHLLDMPLPDALATVER 417 Query: 409 VMIERALQGAAGNRAEAARRLGISRQQLYRRLEEAGKSHD 448 I AL+ A GNRAEAAR+LGI RQ LY R+ G D Sbjct: 418 AAILHALERANGNRAEAARQLGIGRQSLYARMANLGIERD 457 >F0Q1Z9.1 F0Q1Z9_ACIAP Two component, sigma54 specific, transcriptional regulator, Fis family Length = 458 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 266/461 (57%), Positives = 315/461 (68%), Gaps = 22/461 (4%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIIDLRMPDEDG 60 MARIL VDDDAAFR SL ET+ LGH+V EA S L+ H A +D RMP DG Sbjct: 1 MARILAVDDDAAFRESLVETLQGLGHEVHEAASGDEALRQAGRHRYAAIFLDHRMPGMDG 60 Query: 61 L----AFLQRAPAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERAL 116 L A R P + P ++LTAYASG TIEA+RLGAFDHLTKPV RAA++E LERAL Sbjct: 61 LETLAALAARVPELP--PVVVLTAYASGSGTIEAMRLGAFDHLTKPVGRAAVIEVLERAL 118 Query: 117 RQ-----GASAPAAASPATEERN-QLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGK 170 R AA T+E + +L+G SEAMR+V K+IG AA S+A VLV GETGTGK Sbjct: 119 RSRAEADATPPAPAARAGTDEADGELIGVSEAMREVHKRIGLAAASEAPVLVQGETGTGK 178 Query: 171 ELVARALHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGG 230 ELVARALHR AR+A PFVA+NCAAIP EL+ESELFGHVKGAF+GA + R G F+ ADGG Sbjct: 179 ELVARALHRHSARSAGPFVALNCAAIPKELLESELFGHVKGAFTGAATDRPGCFRAADGG 238 Query: 231 TLFLDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFR 290 L LDEIGDM QAK+LR LQE E+TP+G ++ V+VDVRV+AATHRDL + +GRFR Sbjct: 239 VLLLDEIGDMAPDVQAKLLRALQEGEVTPLGSHRPVKVDVRVVAATHRDLAAAVREGRFR 298 Query: 291 EDLWYRLQVLTIMVPALRERPGDILTIAEHFLRQLGGDAP-KRISPAAARLLLQHAWPGN 349 EDL YRL VL I +P LRER DI+ +AEHFLR+ P KR++P AAR LL H WPGN Sbjct: 299 EDLRYRLDVLQIALPPLRERLADIVPLAEHFLRRAAAPQPAKRLAPDAARALLAHGWPGN 358 Query: 350 VRELRNTMERAAVMSHGLCIEAEDIGLSARHPVGAAGAASAPA-----IDW-DGPLAAAL 403 VRELRN MER + G + A D+ L P G+A AS PA DW D PL A+ Sbjct: 359 VRELRNAMERVQALQRGPVVGAADLDLGP--PTGSA-TASGPADGALPQDWLDVPLPEAV 415 Query: 404 AEVERVMIERALQGAAGNRAEAARRLGISRQQLYRRLEEAG 444 +ER +I AL+ A GNR+ AARRLGI RQ LY +L + G Sbjct: 416 ERLERRLIAHALEQARGNRSLAARRLGIHRQLLYSKLAQYG 456 >A1TIJ6.1 A1TIJ6_ACIAC Sigma54 specific transcriptional regulator, Fis family Length = 458 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 267/461 (57%), Positives = 315/461 (68%), Gaps = 22/461 (4%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIIDLRMPDEDG 60 MARIL VDDDAAFR SL ET+ LGH+V EA S L+ H A +D RMP DG Sbjct: 1 MARILAVDDDAAFRESLVETLQGLGHEVHEAASGDEALRQAGRHRYAAIFLDHRMPGMDG 60 Query: 61 L----AFLQRAPAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERAL 116 L A R P + P ++LTAYASG TIEA+RLGAFDHLTKPV RAA++E LERAL Sbjct: 61 LETLAALAARVPELP--PVVVLTAYASGSGTIEAMRLGAFDHLTKPVGRAAVIEVLERAL 118 Query: 117 RQ------GASAPAAASPATEERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGK 170 R APAA + A E +L+G SEAMR+V K+IG AA S+A VLV GETGTGK Sbjct: 119 RSRAEADAAPPAPAARAGADEADGELIGVSEAMREVHKRIGLAAASEAPVLVQGETGTGK 178 Query: 171 ELVARALHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGG 230 ELVARALHR AR+A PFVA+NCAAIP EL+ESELFGHVKGAF+GA + R G F+ ADGG Sbjct: 179 ELVARALHRHSARSAGPFVALNCAAIPKELLESELFGHVKGAFTGAATDRPGCFRAADGG 238 Query: 231 TLFLDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFR 290 L LDEIGDM QAK+LR LQE E+TP+G ++ V+VDVRV+AATHRDL + +GRFR Sbjct: 239 VLLLDEIGDMAPDVQAKLLRALQEGEVTPLGSHRPVKVDVRVVAATHRDLTAAVREGRFR 298 Query: 291 EDLWYRLQVLTIMVPALRERPGDILTIAEHFLRQLGGDAP-KRISPAAARLLLQHAWPGN 349 EDL YRL VL I +P LRER DI+ +AEHFLR+ P KR++P AAR LL H WPGN Sbjct: 299 EDLRYRLDVLQIALPPLRERLADIVPLAEHFLRRAAAPQPAKRLAPDAARALLAHGWPGN 358 Query: 350 VRELRNTMERAAVMSHGLCIEAEDIGLSARHPVGAAGAAS-----APAIDW-DGPLAAAL 403 VRELRN MER + G + A D+ L P A+ AAS A DW D PL A+ Sbjct: 359 VRELRNAMERVQALQRGPVVGAADLDLG---PPPASAAASGTDDGALPQDWLDVPLPEAV 415 Query: 404 AEVERVMIERALQGAAGNRAEAARRLGISRQQLYRRLEEAG 444 +ER +I AL+ A GNR+ AARRLGI RQ LY +L + G Sbjct: 416 ERLERQLIAHALEQARGNRSLAARRLGIHRQLLYSKLAQYG 456 >E6VAG6.1 E6VAG6_VARPD Two component, sigma54 specific, transcriptional regulator, Fis family Length = 451 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 251/449 (55%), Positives = 311/449 (69%), Gaps = 5/449 (1%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIIDLRMPDEDG 60 MA +LIVDDD AFR +LAET+ LGHDV+ A A ++ LA DA +D RMP DG Sbjct: 1 MAHLLIVDDDDAFRDTLAETLQGLGHDVIAAAGGAEAMETLARGRFDAVFLDHRMPGMDG 60 Query: 61 LAFL--QRAPAIAAIPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERALRQ 118 L L +A + P I+LTA+AS NTIEA+RLGAFDHL KP+ R A+ E LERAL+Q Sbjct: 61 LQTLAAMQARLVHLPPVIVLTAFASAGNTIEAMRLGAFDHLAKPISREAVREVLERALQQ 120 Query: 119 GASAPAAASPATEERN--QLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGKELVARA 176 +A +++PA E+ + L+G AMR+V K+IG AA + VLVLGETGTGKE+VARA Sbjct: 121 RTTATPSSAPAEEDDSGGDLIGPGHAMREVHKRIGLAAANSMPVLVLGETGTGKEMVARA 180 Query: 177 LHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGGTLFLDE 236 LHR ARA RPFVA+NC+AIP EL+ESELFGHV+GAF+GAT R G F+ ADGG L LDE Sbjct: 181 LHRHSARADRPFVAINCSAIPKELLESELFGHVRGAFTGATGERPGCFRAADGGVLLLDE 240 Query: 237 IGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFREDLWYR 296 IGDM L QAKILR LQE E+TP+G +++++VDVRVIAATHRDL + +GRFREDL YR Sbjct: 241 IGDMALDMQAKILRALQEGEVTPLGSHRTIKVDVRVIAATHRDLAAAVREGRFREDLLYR 300 Query: 297 LQVLTIMVPALRERPGDILTIAEHFLRQLGG-DAPKRISPAAARLLLQHAWPGNVRELRN 355 L VL+I +P LRER DI+ +AEHFLR+ +APK +S AA+ LL H WPGNVRELRN Sbjct: 301 LDVLSIRLPPLRERLADIIPLAEHFLRRAATPEAPKALSADAAQRLLSHPWPGNVRELRN 360 Query: 356 TMERAAVMSHGLCIEAEDIGLSARHPVGAAGAASAPAIDWDGPLAAALAEVERVMIERAL 415 MER + I D+ + + PA D L AA+ +ER++I AL Sbjct: 361 VMERCQALVRHRVIGGADLAAALGTARPGETEQTLPAGWLDAELPAAVERLERLLIANAL 420 Query: 416 QGAAGNRAEAARRLGISRQQLYRRLEEAG 444 + GNRAEAARRLGI RQ LYR+L + G Sbjct: 421 AESGGNRAEAARRLGIHRQLLYRKLTQHG 449 >Q5GV17.1 Q5GV17_XANOR Two-component system regulatory protein Length = 448 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 258/451 (57%), Positives = 306/451 (67%), Gaps = 11/451 (2%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIIDLRMPDEDG 60 MA ILI+DDDAAFR +L T+ GH V+ A + GL L+ +D A +D RMP DG Sbjct: 1 MACILIIDDDAAFRTTLQATLRSFGHTVVAADNGPDGLARLSEGGIDMAFVDFRMPGMDG 60 Query: 61 LAFLQRAPAIAA---IPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERALR 117 +A L+ A +P +MLTA+ S NTIEA+ LGAFDHL KPV RA +VE +ERAL Sbjct: 61 IAVLRARLDDAQARQVPLVMLTAHVSSGNTIEAMTLGAFDHLVKPVGRADIVEVVERALL 120 Query: 118 QGASAPAAASPAT----EERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGKELV 173 A A AAA+ E+ + LVG S AMR V K IG AA SD VL+ GETGTGKEL Sbjct: 121 SRADAQAAATETPQAPHEDDDALVGHSPAMRTVHKHIGLAAASDLPVLITGETGTGKELA 180 Query: 174 ARALHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGGTLF 233 ARALHR RA PFVAVNCAAIP EL+ESELFGH KGAFSGA+S RLG +EADGGTLF Sbjct: 181 ARALHRASPRAEAPFVAVNCAAIPLELMESELFGHRKGAFSGASSDRLGLIREADGGTLF 240 Query: 234 LDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFREDL 293 LDEIGDM L QAK+LR LQE E+TP+GG+ S +VDVRV+AATHRDL + GRFR DL Sbjct: 241 LDEIGDMPLPMQAKLLRFLQEGEVTPLGGSGSQKVDVRVLAATHRDLAACVADGRFRSDL 300 Query: 294 WYRLQVLTIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPGNVREL 353 YRL V+ I +P LRER DIL +A+HFL A + +SPAA LL H WPGNVREL Sbjct: 301 RYRLNVVPIELPPLRERGQDILLLAQHFLSTNAARA-QSLSPAAQERLLAHRWPGNVREL 359 Query: 354 RNTMERAAVMSHGLCIEAEDIGLSARHPVGAAGAASAPAIDWDGPLAAALAEVERVMIER 413 RN M+R+ VM G I+A D+ A G A A A+ G L A+A +E+ MI+ Sbjct: 360 RNVMQRSQVMVRGASIDAADLD-EALAEAGEATPDVASAM--TGTLPEAVARLEKQMIQS 416 Query: 414 ALQGAAGNRAEAARRLGISRQQLYRRLEEAG 444 AL+ + GNRAEAARRLGI RQ LYR+LEE G Sbjct: 417 ALEQSHGNRAEAARRLGIHRQLLYRKLEEYG 447 >Q2NYA1.1 Q2NYA1_XANOM Two-component system regulatory protein Length = 448 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 258/451 (57%), Positives = 306/451 (67%), Gaps = 11/451 (2%) Query: 1 MARILIVDDDAAFRGSLAETVSDLGHDVLEAGSTAAGLKLLAAHAVDAAIIDLRMPDEDG 60 MA ILI+DDDAAFR +L T+ GH V+ A + GL L+ +D A +D RMP DG Sbjct: 1 MACILIIDDDAAFRTTLQATLRSFGHTVVAADNGPDGLARLSEGGIDMAFVDFRMPGMDG 60 Query: 61 LAFLQRAPAIAA---IPCIMLTAYASGDNTIEAIRLGAFDHLTKPVPRAALVETLERALR 117 +A L+ A +P +MLTA+ S NTIEA+ LGAFDHL KPV RA +VE +ERAL Sbjct: 61 IAVLRARLDDAQARQVPLVMLTAHVSSGNTIEAMTLGAFDHLVKPVGRADIVEVVERALL 120 Query: 118 QGASAPAAASPAT----EERNQLVGESEAMRQVFKQIGRAATSDATVLVLGETGTGKELV 173 A A AAA+ E+ + LVG S AMR V K IG AA SD VL+ GETGTGKEL Sbjct: 121 SRADAQAAATETPQAPHEDDDALVGHSPAMRTVHKHIGLAAASDLPVLITGETGTGKELA 180 Query: 174 ARALHRKGARAARPFVAVNCAAIPAELIESELFGHVKGAFSGATSPRLGRFQEADGGTLF 233 ARALHR RA PFVAVNCAAIP EL+ESELFGH KGAFSGA+S RLG +EADGGTLF Sbjct: 181 ARALHRASPRAEAPFVAVNCAAIPLELMESELFGHRKGAFSGASSDRLGLIREADGGTLF 240 Query: 234 LDEIGDMELATQAKILRVLQERELTPVGGNQSVRVDVRVIAATHRDLQHEITQGRFREDL 293 LDEIGDM L QAK+LR LQE E+TP+GG+ S +VDVRV+AATHRDL + GRFR DL Sbjct: 241 LDEIGDMPLPMQAKLLRFLQEGEVTPLGGSGSQKVDVRVLAATHRDLAACVADGRFRSDL 300 Query: 294 WYRLQVLTIMVPALRERPGDILTIAEHFLRQLGGDAPKRISPAAARLLLQHAWPGNVREL 353 YRL V+ I +P LRER DIL +A+HFL A + +SPAA LL H WPGNVREL Sbjct: 301 RYRLNVVPIELPPLRERGQDILLLAQHFLSTNAARA-QSLSPAAQERLLAHRWPGNVREL 359 Query: 354 RNTMERAAVMSHGLCIEAEDIGLSARHPVGAAGAASAPAIDWDGPLAAALAEVERVMIER 413 RN M+R+ VM G I+A D+ A G A A A+ G L A+A +E+ MI+ Sbjct: 360 RNVMQRSQVMVRGASIDAADLD-EALAEAGEATPDVASAM--TGTLPEAVARLEKQMIQS 416 Query: 414 ALQGAAGNRAEAARRLGISRQQLYRRLEEAG 444 AL+ + GNRAEAARRLGI RQ LYR+LEE G Sbjct: 417 ALEQSHGNRAEAARRLGIHRQLLYRKLEEYG 447