BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0261.p (94 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWY8.1 D8IWY8_HERSS HsdR-like type I restriction modification ... 191 3e-47 Q2KZC4.1 Q2KZC4_BORA1 Restriction-modification system, endonucle... 165 2e-39 Q1K3D1.1 Q1K3D1_DESAC Type I site-specific deoxyribonuclease, Hs... 140 4e-32 B1JLS4.1 B1JLS4_YERPY Type I site-specific deoxyribonuclease, Hs... 129 1e-28 C9P131.1 C9P131_VIBME Type I site-specific deoxyribonuclease Hsd... 127 4e-28 A6DIK5.1 A6DIK5_9BACT Putative type I restriction enzyme, R subunit 127 5e-28 D0X200.1 D0X200_VIBAL Putative uncharacterized protein 127 5e-28 A7FML4.1 A7FML4_YERP3 Type I site-specific deoxyribonuclease, Hs... 127 6e-28 Q2BNA8.1 Q2BNA8_9GAMM Putative type I restriction enzyme, R subunit 126 1e-27 A3DB24.1 A3DB24_SHEB5 Type I site-specific deoxyribonuclease, Hs... 125 2e-27 >D8IWY8.1 D8IWY8_HERSS HsdR-like type I restriction modification system protein Length = 1049 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 92/94 (97%), Positives = 92/94 (97%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNR KDSLNEVPL Sbjct: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRAKDSLNEVPL 60 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 TDSEMQQIMEQITALRTPLKLNGFINGKTVSI R Sbjct: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSITR 94 >Q2KZC4.1 Q2KZC4_BORA1 Restriction-modification system, endonuclease subunit Length = 1044 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 77/94 (81%), Positives = 85/94 (90%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 MT FAKES+FE A+I LRQRGWG+ +VIK P+EADLLANWK+ILFENNRGKD LNEVPL Sbjct: 1 MTNFAKESEFEAAVIHELRQRGWGELEVIKCPSEADLLANWKKILFENNRGKDRLNEVPL 60 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 TDSEMQQ+MEQI ALRTPLKLNGFINGKTV+I R Sbjct: 61 TDSEMQQVMEQIVALRTPLKLNGFINGKTVAITR 94 >Q1K3D1.1 Q1K3D1_DESAC Type I site-specific deoxyribonuclease, HsdR family Length = 1059 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/94 (72%), Positives = 79/94 (84%), Gaps = 1/94 (1%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 MTTF+KE+DFE A+I L QRGW ++ VIKNP+E +LL NW ILFENNRG D LN+VPL Sbjct: 1 MTTFSKEADFEQAVIHELSQRGW-ESQVIKNPSEKELLENWATILFENNRGVDRLNDVPL 59 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 T+SEMQQIMEQ+ LRTPLKLNGFINGKTV+I R Sbjct: 60 TESEMQQIMEQVIELRTPLKLNGFINGKTVAITR 93 >B1JLS4.1 B1JLS4_YERPY Type I site-specific deoxyribonuclease, HsdR family EC=3.1.21.3 Length = 1075 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/94 (65%), Positives = 75/94 (79%), Gaps = 1/94 (1%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 MTTF E+ FE A I+VL +GW + +++KN TEADLL NW ILFENNR +D LN+VPL Sbjct: 1 MTTFKTEAQFEQAFIEVLTHKGW-ETEILKNKTEADLLQNWASILFENNRQRDRLNDVPL 59 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 TD+EMQQI+EQI L+TPLKLNG INGKTV+I R Sbjct: 60 TDTEMQQIIEQIKELKTPLKLNGLINGKTVAIKR 93 >C9P131.1 C9P131_VIBME Type I site-specific deoxyribonuclease HsdR family Length = 1087 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/94 (64%), Positives = 75/94 (79%), Gaps = 1/94 (1%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 MTTF E+ FE A I+VL +GW ++D++KN TEADLL NW ILFENNR +D LN+VPL Sbjct: 1 MTTFKTEAQFEQAFIEVLTHKGW-ESDILKNKTEADLLQNWANILFENNRQQDRLNDVPL 59 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 T +EMQQI+EQ+ L+TPLKLNG INGKTV+I R Sbjct: 60 TATEMQQIIEQVKELKTPLKLNGLINGKTVAIKR 93 >A6DIK5.1 A6DIK5_9BACT Putative type I restriction enzyme, R subunit Length = 1053 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/94 (68%), Positives = 74/94 (78%), Gaps = 1/94 (1%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 M+TF E++FE ALI VL+ +GW + +VIKNP E DLL NW ILFENNR D LN+VPL Sbjct: 1 MSTFKTEAEFEEALIAVLKDKGW-ENEVIKNPREEDLLKNWANILFENNRDIDRLNDVPL 59 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 T EMQQI+EQIT L+TPLKLN FINGKTVSI R Sbjct: 60 TGGEMQQIIEQITELKTPLKLNNFINGKTVSIKR 93 >D0X200.1 D0X200_VIBAL Putative uncharacterized protein Length = 1259 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/94 (65%), Positives = 74/94 (78%), Gaps = 1/94 (1%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 MT F +E+DFE A I+VL +GW + +V+KN TEADLL NW ILFENNR +D LN+VPL Sbjct: 1 MTIFKREADFEQAFIEVLIDKGW-EREVLKNKTEADLLQNWANILFENNRQRDRLNDVPL 59 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 T EMQQI+EQI L+TP KLNGFINGKTV+I R Sbjct: 60 TSGEMQQIIEQIKELKTPFKLNGFINGKTVAIKR 93 >A7FML4.1 A7FML4_YERP3 Type I site-specific deoxyribonuclease, HsdR family Length = 1082 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 62/94 (65%), Positives = 74/94 (78%), Gaps = 1/94 (1%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 MTTF E+ FE A I+VL +GW + ++KN TEADLL NW ILFENNR +D LN+VPL Sbjct: 1 MTTFKTEAQFEQAFIEVLTNKGW-EQKILKNKTEADLLQNWANILFENNRQRDRLNDVPL 59 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 TD+EMQQI+EQI L+TPLKLNG INGKTV+I R Sbjct: 60 TDTEMQQIIEQIKELKTPLKLNGLINGKTVAIKR 93 >Q2BNA8.1 Q2BNA8_9GAMM Putative type I restriction enzyme, R subunit Length = 1262 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/94 (65%), Positives = 74/94 (78%), Gaps = 1/94 (1%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 MT F KE+DFE A I+VL +GW + +V+KN TEADL NW ILFENNR +D LN+VPL Sbjct: 1 MTIFKKEADFEQAFIEVLIDKGW-EREVLKNKTEADLQQNWANILFENNRQRDRLNDVPL 59 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 T+ EMQQI+EQI L+TP KLNGFINGKTV+I R Sbjct: 60 TNGEMQQIIEQIKELKTPFKLNGFINGKTVAIKR 93 >A3DB24.1 A3DB24_SHEB5 Type I site-specific deoxyribonuclease, HsdR family Length = 1061 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/94 (67%), Positives = 72/94 (76%), Gaps = 1/94 (1%) Query: 1 MTTFAKESDFEVALIDVLRQRGWGDADVIKNPTEADLLANWKQILFENNRGKDSLNEVPL 60 M TF KE+DFE A ++ L +GW A V+KN TEADLL NW ILFENNR +D LN+V L Sbjct: 1 MNTFKKEADFEQAFVEALTNKGWESA-VLKNKTEADLLQNWANILFENNRQRDRLNDVAL 59 Query: 61 TDSEMQQIMEQITALRTPLKLNGFINGKTVSIIR 94 T SEMQQI+EQI LRTPLKLNG INGKTV+I R Sbjct: 60 TASEMQQIIEQIKELRTPLKLNGLINGKTVAIKR 93