BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0210.p (297 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWU4.1 D8IWU4_HERSS AraC family transcription regulator protein 552 e-155 C1DF31.1 C1DF31_AZOVD Transcriptional regulator, AraC family 235 5e-60 Q9I0E6.1 Q9I0E6_PSEAE Probable transcriptional regulator 217 1e-54 Q02NI7.1 Q02NI7_PSEAB Putative transcriptional regulator 217 1e-54 B7V806.1 B7V806_PSEA8 Probable transcriptional regulator 217 1e-54 A3L9C0.1 A3L9C0_PSEAE Putative uncharacterized protein 217 1e-54 A3KV87.1 A3KV87_PSEAE Putative uncharacterized protein 217 1e-54 E2ZV48.1 E2ZV48_PSEAE Putative transcriptional regulator 213 4e-53 A6V8E0.1 A6V8E0_PSEA7 Probable transcriptional regulator 209 4e-52 Q92Y82.1 Q92Y82_RHIME Transcriptional regulator 203 3e-50 >D8IWU4.1 D8IWU4_HERSS AraC family transcription regulator protein Length = 294 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 293/297 (98%), Positives = 294/297 (98%), Gaps = 3/297 (1%) Query: 1 MQDSPSRFMKLIPLQHGMALVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHRLW 60 MQDSPSRFMKLIPLQHGMALVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREH+LW Sbjct: 1 MQDSPSRFMKLIPLQHGMALVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHKLW 60 Query: 61 RGQRLVHAGAHRRGEVAVTDLREQWRCQHLSGYENVRLLVPRTAMEELGEEIARPVGELR 120 RGQRLVHAGAHRRGEVAVTDLREQWRCQHLSGYENVRLLVPRTAMEELGEEIARPVGELR Sbjct: 61 RGQRLVHAGAHRRGEVAVTDLREQWRCQHLSGYENVRLLVPRTAMEELGEEIARPVGELR 120 Query: 121 PVQGAADPVLFHLAQAMLPAARTAGAAGAASVPSVASETLFLDSMMLALTTHLWQRYGQQ 180 PVQGAADPVLFHLAQAMLPAARTAGAAGAA SVASETLFLDSMMLALTTHLWQRYGQQ Sbjct: 121 PVQGAADPVLFHLAQAMLPAARTAGAAGAA---SVASETLFLDSMMLALTTHLWQRYGQQ 177 Query: 181 SSRPASAAGRLAGWQEARVRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPH 240 SSRPASAAGRLAGWQEARVRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPH Sbjct: 178 SSRPASAAGRLAGWQEARVRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPH 237 Query: 241 AWLQQQRIALACRLLHEGGKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLRRRS 297 AWLQQQRIALACRLLHEGGKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLRRRS Sbjct: 238 AWLQQQRIALACRLLHEGGKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLRRRS 294 >C1DF31.1 C1DF31_AZOVD Transcriptional regulator, AraC family Length = 318 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 121/263 (46%), Positives = 170/263 (64%), Gaps = 12/263 (4%) Query: 33 PAPVIEIPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEVAVTDLREQWRCQHLSG 92 PA ++E+P ADA+S+IVQL+DF HRLWRG+RL + G H R +++ L ++ RCQHL+ Sbjct: 39 PARILEVPCADAFSIIVQLRDFASHRLWRGKRLAYKGGHVRESMSIAYLGDEVRCQHLAP 98 Query: 93 YENVRLLVPRTAMEELGEEI-ARPVGELRPVQGAADPVLFHLAQAMLPAARTAGAAGAAS 151 Y+N+RL +PR ++EE E A G L QG DPV++HL+ A++PA G A Sbjct: 99 YDNLRLNLPRASLEETFREAGAGAPGSLDCAQGTLDPVVYHLSLALVPALSMPGEA---- 154 Query: 152 VPSVASETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQEARVRDFMLSHLAQRL 211 LF+D +MLA+ TH+ RYG+ G LA WQE R ++ + HLA L Sbjct: 155 ------NRLFVDQVMLAMCTHIGSRYGKTGPL-RDIPGGLAPWQERRAKEMLAEHLADGL 207 Query: 212 SLAEIAAQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLLHEGGKSMTTIALECGF 271 S+AE+AA+ LSRA+FSRAFK+S GL+PH WL + R+ A L+ S++ I L+CGF Sbjct: 208 SIAELAAECSLSRAYFSRAFKRSTGLAPHEWLLKMRVEKAKELMLHTSMSLSRIGLDCGF 267 Query: 272 SDQSHFSRVFKQVQGMGPAAWLR 294 +DQSHFSRVF+++ G P+ W R Sbjct: 268 TDQSHFSRVFQKMTGAAPSNWRR 290 >Q9I0E6.1 Q9I0E6_PSEAE Probable transcriptional regulator Length = 297 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 168/279 (60%), Gaps = 15/279 (5%) Query: 17 GMALVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEV 76 G AL+ ++A P P VI IP AD++SVIVQL+DF HRLW G +LV G H R + Sbjct: 23 GYALIRNSEATPD---PDKVIHIPCADSFSVIVQLRDFNSHRLWNGNKLVFDGGHPRKSI 79 Query: 77 AVTDLREQWRCQHLSGYENVRLLVPRTAMEE-LGEEIARPVGELRPVQGAADPVLFHLAQ 135 ++ L ++ +CQH + Y+NVR ++PR +++E L EE R E + G DPV++HLA Sbjct: 80 SIAYLGDEIKCQHRTTYDNVRFMLPRASIKEFLYEEGQRASAEPERIIGVDDPVVYHLAL 139 Query: 136 AMLPAARTAGAAGAASVPSVASETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQ 195 A+LP+ AG LF++ +MLAL TH+ R+ + P LA WQ Sbjct: 140 ALLPSFARAGE----------RNELFIEQVMLALLTHVQDRFAS-TQVPVCTGKGLAPWQ 188 Query: 196 EARVRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLL 255 R ++ + HLA+ +S+A +A + GLSR++F++AFK S G+SPH WL + R+ A L+ Sbjct: 189 LRRAKELIAGHLAEGVSVARLAEECGLSRSYFTKAFKCSTGVSPHEWLMRMRVDRAKELM 248 Query: 256 HEGGKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLR 294 + ++ I + CGFSDQ HFSR+F ++ G P+ W R Sbjct: 249 LGSDEPLSQIGVACGFSDQPHFSRIFLRLAGASPSTWRR 287 >Q02NI7.1 Q02NI7_PSEAB Putative transcriptional regulator Length = 297 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 168/279 (60%), Gaps = 15/279 (5%) Query: 17 GMALVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEV 76 G AL+ ++A P P VI IP AD++SVIVQL+DF HRLW G +LV G H R + Sbjct: 23 GYALIRNSEATPD---PDKVIHIPCADSFSVIVQLRDFNSHRLWNGNKLVFDGGHPRKSI 79 Query: 77 AVTDLREQWRCQHLSGYENVRLLVPRTAMEE-LGEEIARPVGELRPVQGAADPVLFHLAQ 135 ++ L ++ +CQH + Y+NVR ++PR +++E L EE R E + G DPV++HLA Sbjct: 80 SIAYLGDEIKCQHRTTYDNVRFMLPRASIKEFLYEEGQRASAEPERIIGVDDPVVYHLAL 139 Query: 136 AMLPAARTAGAAGAASVPSVASETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQ 195 A+LP+ AG LF++ +MLAL TH+ R+ + P LA WQ Sbjct: 140 ALLPSFARAGE----------RNELFIEQVMLALLTHVQDRFAS-TQVPVCTGKGLAPWQ 188 Query: 196 EARVRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLL 255 R ++ + HLA+ +S+A +A + GLSR++F++AFK S G+SPH WL + R+ A L+ Sbjct: 189 LRRAKELIAGHLAEGVSVARLAEECGLSRSYFTKAFKCSTGVSPHEWLMRMRVDRAKELM 248 Query: 256 HEGGKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLR 294 + ++ I + CGFSDQ HFSR+F ++ G P+ W R Sbjct: 249 LGSDEPLSQIGVACGFSDQPHFSRIFLRLAGASPSTWRR 287 >B7V806.1 B7V806_PSEA8 Probable transcriptional regulator Length = 297 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 168/279 (60%), Gaps = 15/279 (5%) Query: 17 GMALVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEV 76 G AL+ ++A P P VI IP AD++SVIVQL+DF HRLW G +LV G H R + Sbjct: 23 GYALIRNSEATPD---PDKVIHIPCADSFSVIVQLRDFNSHRLWNGNKLVFDGGHPRKSI 79 Query: 77 AVTDLREQWRCQHLSGYENVRLLVPRTAMEE-LGEEIARPVGELRPVQGAADPVLFHLAQ 135 ++ L ++ +CQH + Y+NVR ++PR +++E L EE R E + G DPV++HLA Sbjct: 80 SIAYLGDEIKCQHRTTYDNVRFMLPRASIKEFLYEEGQRASAEPERIIGVDDPVVYHLAL 139 Query: 136 AMLPAARTAGAAGAASVPSVASETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQ 195 A+LP+ AG LF++ +MLAL TH+ R+ + P LA WQ Sbjct: 140 ALLPSFARAGE----------RNELFIEQVMLALLTHVQDRFAS-TQVPVCTGKGLAPWQ 188 Query: 196 EARVRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLL 255 R ++ + HLA+ +S+A +A + GLSR++F++AFK S G+SPH WL + R+ A L+ Sbjct: 189 LRRAKELIAGHLAEGVSVARLAEECGLSRSYFTKAFKCSTGVSPHEWLMRMRVDRAKELM 248 Query: 256 HEGGKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLR 294 + ++ I + CGFSDQ HFSR+F ++ G P+ W R Sbjct: 249 LGSDEPLSQIGVACGFSDQPHFSRIFLRLAGASPSTWRR 287 >A3L9C0.1 A3L9C0_PSEAE Putative uncharacterized protein Length = 297 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 168/279 (60%), Gaps = 15/279 (5%) Query: 17 GMALVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEV 76 G AL+ ++A P P VI IP AD++SVIVQL+DF HRLW G +LV G H R + Sbjct: 23 GYALIRNSEATPD---PDKVIHIPCADSFSVIVQLRDFNSHRLWNGNKLVFDGGHPRKSI 79 Query: 77 AVTDLREQWRCQHLSGYENVRLLVPRTAMEE-LGEEIARPVGELRPVQGAADPVLFHLAQ 135 ++ L ++ +CQH + Y+NVR ++PR +++E L EE R E + G DPV++HLA Sbjct: 80 SIAYLGDEIKCQHRTTYDNVRFMLPRASIKEFLYEEGQRASAEPERIIGVDDPVVYHLAL 139 Query: 136 AMLPAARTAGAAGAASVPSVASETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQ 195 A+LP+ AG LF++ +MLAL TH+ R+ + P LA WQ Sbjct: 140 ALLPSFARAGE----------RNELFIEQVMLALLTHVQDRFAS-TQVPVCTGKGLAPWQ 188 Query: 196 EARVRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLL 255 R ++ + HLA+ +S+A +A + GLSR++F++AFK S G+SPH WL + R+ A L+ Sbjct: 189 LRRAKELIAGHLAEGVSVARLAEECGLSRSYFTKAFKCSTGVSPHEWLMRMRVDRAKELM 248 Query: 256 HEGGKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLR 294 + ++ I + CGFSDQ HFSR+F ++ G P+ W R Sbjct: 249 LGSDEPLSQIGVACGFSDQPHFSRIFLRLAGASPSTWRR 287 >A3KV87.1 A3KV87_PSEAE Putative uncharacterized protein Length = 297 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/279 (40%), Positives = 168/279 (60%), Gaps = 15/279 (5%) Query: 17 GMALVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEV 76 G AL+ ++A P P VI IP AD++SVIVQL+DF HRLW G +LV G H R + Sbjct: 23 GYALIRNSEATPD---PDKVIHIPCADSFSVIVQLRDFNSHRLWNGNKLVFDGGHPRKSI 79 Query: 77 AVTDLREQWRCQHLSGYENVRLLVPRTAMEE-LGEEIARPVGELRPVQGAADPVLFHLAQ 135 ++ L ++ +CQH + Y+NVR ++PR +++E L EE R E + G DPV++HLA Sbjct: 80 SIAYLGDEIKCQHRTTYDNVRFMLPRASIKEFLYEEGQRASAEPERIIGVDDPVVYHLAL 139 Query: 136 AMLPAARTAGAAGAASVPSVASETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQ 195 A+LP+ AG LF++ +MLAL TH+ R+ + P LA WQ Sbjct: 140 ALLPSFARAGE----------RNELFIEQVMLALLTHVQDRFAS-TQVPVCTGKGLAPWQ 188 Query: 196 EARVRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLL 255 R ++ + HLA+ +S+A +A + GLSR++F++AFK S G+SPH WL + R+ A L+ Sbjct: 189 LRRAKELIAGHLAEGVSVARLAEECGLSRSYFTKAFKCSTGVSPHEWLMRMRVDRAKELM 248 Query: 256 HEGGKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLR 294 + ++ I + CGFSDQ HFSR+F ++ G P+ W R Sbjct: 249 LGSDEPLSQIGVACGFSDQPHFSRIFLRLAGASPSTWRR 287 >E2ZV48.1 E2ZV48_PSEAE Putative transcriptional regulator Length = 272 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 111/276 (40%), Positives = 167/276 (60%), Gaps = 15/276 (5%) Query: 20 LVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEVAVT 79 ++ ++A P P VI IP AD++SVIVQL+DF HRLW G +LV G H R +++ Sbjct: 1 MIRNSEATPD---PDKVIHIPCADSFSVIVQLRDFNSHRLWNGNKLVFDGGHPRKSISIA 57 Query: 80 DLREQWRCQHLSGYENVRLLVPRTAMEE-LGEEIARPVGELRPVQGAADPVLFHLAQAML 138 L ++ +CQH + Y+NVR ++PR +++E L EE R E + G DPV++HLA A+L Sbjct: 58 YLGDEIKCQHRTTYDNVRFMLPRASIKEFLYEEGQRASAEPERIIGVDDPVVYHLALALL 117 Query: 139 PAARTAGAAGAASVPSVASETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQEAR 198 P+ AG LF++ +MLAL TH+ R+ + PA LA WQ R Sbjct: 118 PSFARAGE----------RNELFVEQVMLALLTHVQGRFAS-TQVPACTGKGLAPWQLRR 166 Query: 199 VRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLLHEG 258 ++ + HLA+ +S+A +A + GLSR++F++AFK S G+SPH WL + R+ A L+ Sbjct: 167 AKELIAGHLAEGVSVARLAEECGLSRSYFTKAFKCSTGVSPHEWLMRMRVDRAKELMLGS 226 Query: 259 GKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLR 294 + ++ I + CGFSDQ HFSR+F ++ G P+ W R Sbjct: 227 DEPLSQIGVACGFSDQPHFSRIFLRLAGASPSTWRR 262 >A6V8E0.1 A6V8E0_PSEA7 Probable transcriptional regulator Length = 272 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 108/276 (39%), Positives = 167/276 (60%), Gaps = 15/276 (5%) Query: 20 LVHAAQAQPQARVPAPVIEIPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEVAVT 79 ++ ++ P P VI IP AD++SVIVQL+DF HRLW G++LV G H + +++ Sbjct: 1 MIRNSETTPD---PDKVIHIPCADSFSVIVQLRDFNSHRLWNGKKLVFDGGHPQKSISIA 57 Query: 80 DLREQWRCQHLSGYENVRLLVPRTAMEE-LGEEIARPVGELRPVQGAADPVLFHLAQAML 138 L ++ +CQH + Y+NVR ++PR +++E L EE R E + G DPV++HLA A+L Sbjct: 58 YLGDEIKCQHRATYDNVRFMLPRASIKEFLYEEGQRMSAEPERIIGVDDPVVYHLALALL 117 Query: 139 PAARTAGAAGAASVPSVASETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQEAR 198 P+ AG LF++ +MLAL TH+ R+ + PA LA WQ R Sbjct: 118 PSFARAGE----------RNELFIEQVMLALLTHVQDRFAS-TPVPACTGKGLAPWQLRR 166 Query: 199 VRDFMLSHLAQRLSLAEIAAQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLLHEG 258 ++ + HL++ +S+A +A + GLSR++F++AFK S G+SPH WL + R+ A L+ Sbjct: 167 AKELIAGHLSEGVSVARLAEECGLSRSYFTKAFKCSTGVSPHEWLMRMRVDRAKELMLGS 226 Query: 259 GKSMTTIALECGFSDQSHFSRVFKQVQGMGPAAWLR 294 + ++ I + CGFSDQ HFSR+F ++ G P+ W R Sbjct: 227 DEPLSQIGVACGFSDQPHFSRIFLRLAGASPSTWRR 262 >Q92Y82.1 Q92Y82_RHIME Transcriptional regulator Length = 302 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 108/259 (41%), Positives = 155/259 (59%), Gaps = 13/259 (5%) Query: 39 IPGADAWSVIVQLQDFREHRLWRGQRLVHAGAHRRGEVAVTDLREQWRCQHLSGYENVRL 98 IP DA+ VIVQL+DF HRLWR LV+ G H + +A+TDLR+QW+C HLS ++N+R Sbjct: 44 IPCTDAFGVIVQLRDFDTHRLWRRGELVYEGGHAKASLAITDLRDQWQCHHLSPFDNIRF 103 Query: 99 LVPRTAMEELGEEIARP-VGELRPVQGAADPVLFHLAQAMLPAARTAGAAGAASVPSVAS 157 +P + M EE+ R L VQG DPV+ LAQA+LP+ PS A+ Sbjct: 104 HIPFSRMRAFAEEVGRSEYMALACVQGRIDPVMHGLAQALLPSLDD---------PSDAN 154 Query: 158 ETLFLDSMMLALTTHLWQRYGQQSSRPASAAGRLAGWQEARVRDFMLSHLAQRLSLAEIA 217 LFL+ + LA+ HL Q YG P G L+ WQE DF+ SH + S+ ++A Sbjct: 155 P-LFLEQINLAMLAHLSQTYGGLHF-PVDKKGTLSPWQERLATDFLASHFNKPFSIGDLA 212 Query: 218 AQSGLSRAHFSRAFKQSFGLSPHAWLQQQRIALACRLLHEGGKSMTTIALECGFSDQSHF 277 ++ GLSR++F++AFK+SFG +P WL + R+A +L S+ +++ CGF+DQSH Sbjct: 213 SRCGLSRSYFNKAFKESFGRTPSKWLTEYRVARVKEMLLL-DLSIAEVSINCGFADQSHM 271 Query: 278 SRVFKQVQGMGPAAWLRRR 296 +RVF + G PA + R+ Sbjct: 272 TRVFTSLTGDTPARFRRKN 290