BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0041.p         (360 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IVL7.1 D8IVL7_HERSS Uroporphyrinogen decarboxylase EC=4.1.1.37      103   6e-20
F1W2H4.1 F1W2H4_9BURK Uroporphyrinogen III decarboxylase               96   8e-18
A4GAF0.1 DCUP_HERAR Uroporphyrinogen decarboxylase EC=4.1.1.37         94   2e-17
A6T450.1 DCUP_JANMA Uroporphyrinogen decarboxylase EC=4.1.1.37         93   8e-17
E8TTN3.1 E8TTN3_ALIDB Uroporphyrinogen decarboxylase EC=4.1.1.37       88   2e-15
C1DDG8.1 C1DDG8_LARHH Uroporphyrinogen decarboxylase EC=4.1.1.37       87   5e-15
Q123Y6.1 DCUP_POLSJ Uroporphyrinogen decarboxylase EC=4.1.1.37         87   6e-15
Q220I2.1 DCUP_RHOFD Uroporphyrinogen decarboxylase EC=4.1.1.37         86   7e-15
A6GL58.1 A6GL58_9BURK Uroporphyrinogen decarboxylase EC=4.1.1.37       85   2e-14
F0EWZ9.1 F0EWZ9_9NEIS Uroporphyrinogen decarboxylase EC=4.1.1.37       85   2e-14

>D8IVL7.1 D8IVL7_HERSS Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 364

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/46 (97%), Positives = 45/46 (97%)

Query: 1  MSTFAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          MSTFAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRA RARA
Sbjct: 6  MSTFAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRATRARA 51


>F1W2H4.1 F1W2H4_9BURK Uroporphyrinogen III decarboxylase
          Length = 359

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/47 (93%), Positives = 45/47 (95%), Gaps = 1/47 (2%)

Query: 1  MST-FAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          MST FAPLKNDTFLRALLRQPTDYTP+WLMRQAGRYLPEYRA RARA
Sbjct: 1  MSTKFAPLKNDTFLRALLRQPTDYTPVWLMRQAGRYLPEYRATRARA 47


>A4GAF0.1 DCUP_HERAR Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 360

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/43 (93%), Positives = 41/43 (95%)

Query: 4  FAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          FAPLKNDTFLRALLRQPTDYTPMW+MRQAGRYLPEYRA R RA
Sbjct: 5  FAPLKNDTFLRALLRQPTDYTPMWMMRQAGRYLPEYRATRTRA 47


>A6T450.1 DCUP_JANMA Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 360

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 43/45 (95%)

Query: 2  STFAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          + FAPL+NDTFLRALLRQPT+YTP+WLMRQAGRYLPEYRA RARA
Sbjct: 3  TQFAPLQNDTFLRALLRQPTEYTPLWLMRQAGRYLPEYRATRARA 47


>E8TTN3.1 E8TTN3_ALIDB Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 372

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/45 (84%), Positives = 42/45 (93%)

Query: 2  STFAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          +TFAPL+NDTFLRA LRQ TDYTP+WLMRQAGRYLPEY+A RARA
Sbjct: 3  NTFAPLRNDTFLRACLRQATDYTPLWLMRQAGRYLPEYKATRARA 47


>C1DDG8.1 C1DDG8_LARHH Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 355

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 7  LKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          LKNDTFLRALLRQPTDYTP+W+MRQAGRYLPEYRA RARA
Sbjct: 5  LKNDTFLRALLRQPTDYTPVWMMRQAGRYLPEYRATRARA 44


>Q123Y6.1 DCUP_POLSJ Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 369

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/43 (88%), Positives = 40/43 (93%)

Query: 4  FAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          FAPL+NDTFLRA LRQ TDYTP+WLMRQAGRYLPEYRA RARA
Sbjct: 2  FAPLQNDTFLRACLRQATDYTPVWLMRQAGRYLPEYRATRARA 44


>Q220I2.1 DCUP_RHOFD Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 369

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/45 (82%), Positives = 41/45 (91%)

Query: 2  STFAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          S FAPLKNDTFLRA LRQ TDYTP+W+MRQAGR+LPEYRA RA+A
Sbjct: 8  SAFAPLKNDTFLRACLRQATDYTPIWMMRQAGRFLPEYRATRAKA 52


>A6GL58.1 A6GL58_9BURK Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 364

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/46 (78%), Positives = 42/46 (91%)

Query: 1  MSTFAPLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          MS+F P+KNDTFLRAL R+ T+YTP+WLMRQAGRYLPEYRA RA+A
Sbjct: 1  MSSFQPVKNDTFLRALRREATEYTPVWLMRQAGRYLPEYRATRAKA 46


>F0EWZ9.1 F0EWZ9_9NEIS Uroporphyrinogen decarboxylase EC=4.1.1.37
          Length = 354

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/41 (85%), Positives = 38/41 (92%)

Query: 6  PLKNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRAARARA 46
          PLKNDTFLRALLRQP +YTP+W+MRQAGRYLPEYR  RARA
Sbjct: 3  PLKNDTFLRALLRQPVEYTPIWMMRQAGRYLPEYRETRARA 43