BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0021.p         (45 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IVJ9.1 D8IVJ9_HERSS 50S ribosomal protein L34                        86   2e-15
F1VVH6.1 F1VVH6_9BURK LSU ribosomal protein L34p                       82   2e-14
C3XC40.1 C3XC40_OXAFO 50S ribosomal protein L34                        82   3e-14
A6T4E0.1 RL34_JANMA 50S ribosomal protein L34                          82   3e-14
A4GAN6.1 RL34_HERAR 50S ribosomal protein L34                          82   3e-14
C3X5W0.1 C3X5W0_OXAFO 50S ribosomal protein L34                        79   2e-13
D0KXN5.1 D0KXN5_HALNC 50S ribosomal protein L34                        78   4e-13
B3R886.1 RL34_CUPTR 50S ribosomal protein L34                          78   5e-13
Q46VL3.1 RL34_CUPPJ 50S ribosomal protein L34                          78   5e-13
Q0K5B8.1 RL34_CUPNH 50S ribosomal protein L34                          78   5e-13

>D8IVJ9.1 D8IVJ9_HERSS 50S ribosomal protein L34
          Length = 45

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/45 (100%), Positives = 45/45 (100%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAAV 45
          MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAAV
Sbjct: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAAV 45


>F1VVH6.1 F1VVH6_9BURK LSU ribosomal protein L34p
          Length = 44

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/44 (95%), Positives = 44/44 (100%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44
          MKRTYQPSVVRRKRTHGFRARMATRGGRAV+NARR+KGRKRLAA
Sbjct: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVLNARRSKGRKRLAA 44


>C3XC40.1 C3XC40_OXAFO 50S ribosomal protein L34
          Length = 51

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/43 (95%), Positives = 43/43 (100%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLA 43
          MKRTYQPSVVRRKRTHGFRARMAT+GGRAV+NARRAKGRKRLA
Sbjct: 8  MKRTYQPSVVRRKRTHGFRARMATKGGRAVLNARRAKGRKRLA 50


>A6T4E0.1 RL34_JANMA 50S ribosomal protein L34
          Length = 44

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/44 (95%), Positives = 43/44 (97%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44
          MKRTYQPSVVRRKRTHGFR RMATRGGRAV+NARRAKGRKRLAA
Sbjct: 1  MKRTYQPSVVRRKRTHGFRVRMATRGGRAVLNARRAKGRKRLAA 44


>A4GAN6.1 RL34_HERAR 50S ribosomal protein L34
          Length = 44

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/44 (95%), Positives = 43/44 (97%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLAA 44
          MKRTYQPSVVRRKRTHGFR RMATRGGRAV+NARRAKGRKRLAA
Sbjct: 1  MKRTYQPSVVRRKRTHGFRVRMATRGGRAVLNARRAKGRKRLAA 44


>C3X5W0.1 C3X5W0_OXAFO 50S ribosomal protein L34
          Length = 44

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/43 (93%), Positives = 42/43 (97%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLA 43
          MKRTYQPSVVRRKRTHGFRARMAT+ GRAV+NARRAKGRKRLA
Sbjct: 1  MKRTYQPSVVRRKRTHGFRARMATKNGRAVLNARRAKGRKRLA 43


>D0KXN5.1 D0KXN5_HALNC 50S ribosomal protein L34
          Length = 44

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/43 (90%), Positives = 41/43 (95%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLA 43
          MKRTYQPS++ R RTHGFRARMATRGGRAVINARRAKGRKRLA
Sbjct: 1  MKRTYQPSIIHRARTHGFRARMATRGGRAVINARRAKGRKRLA 43


>B3R886.1 RL34_CUPTR 50S ribosomal protein L34
          Length = 44

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/43 (93%), Positives = 40/43 (93%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLA 43
          MKRTYQPSV RRKRTHGFR RM TRGGRAVINARRAKGRKRLA
Sbjct: 1  MKRTYQPSVTRRKRTHGFRVRMKTRGGRAVINARRAKGRKRLA 43


>Q46VL3.1 RL34_CUPPJ 50S ribosomal protein L34
          Length = 44

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/43 (93%), Positives = 40/43 (93%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLA 43
          MKRTYQPSV RRKRTHGFR RM TRGGRAVINARRAKGRKRLA
Sbjct: 1  MKRTYQPSVTRRKRTHGFRVRMKTRGGRAVINARRAKGRKRLA 43


>Q0K5B8.1 RL34_CUPNH 50S ribosomal protein L34
          Length = 44

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/43 (93%), Positives = 40/43 (93%)

Query: 1  MKRTYQPSVVRRKRTHGFRARMATRGGRAVINARRAKGRKRLA 43
          MKRTYQPSV RRKRTHGFR RM TRGGRAVINARRAKGRKRLA
Sbjct: 1  MKRTYQPSVTRRKRTHGFRVRMKTRGGRAVINARRAKGRKRLA 43