BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0011.p (384 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUR5.1 D8IUR5_HERSS DNA polymerase IV EC=2.7.7.7 771 0.0 A6T428.1 A6T428_JANMA DNA polymerase IV EC=2.7.7.7 557 e-157 E5AR64.1 E5AR64_BURRH DNA polymerase IV EC=2.7.7.7 545 e-153 D5WGF6.1 D5WGF6_BURSC DNA polymerase IV EC=2.7.7.7 536 e-150 D5NCG7.1 D5NCG7_9BURK DNA polymerase IV EC=2.7.7.7 535 e-150 B5WE92.1 B5WE92_9BURK DNA polymerase IV EC=2.7.7.7 534 e-149 E1TDU9.1 E1TDU9_BURSG DNA polymerase IV EC=2.7.7.7 532 e-149 A4GAC8.2 A4GAC8_HERAR DNA polymerase IV EC=2.7.7.7 530 e-148 Q13PR9.1 Q13PR9_BURXL DNA polymerase IV EC=2.7.7.7 529 e-148 Q1LHF9.1 Q1LHF9_RALME DNA polymerase IV EC=2.7.7.7 526 e-147 >D8IUR5.1 D8IUR5_HERSS DNA polymerase IV EC=2.7.7.7 Length = 384 Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/384 (99%), Positives = 383/384 (99%) Query: 1 MANDRRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAG 60 MANDRRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAG Sbjct: 1 MANDRRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAG 60 Query: 61 RGVVTTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLI 120 RGVVTTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLI Sbjct: 61 RGVVTTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLI 120 Query: 121 EDRGIDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNG 180 EDRGIDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNG Sbjct: 121 EDRGIDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNG 180 Query: 181 LTILTPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYA 240 LTILTPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLA AAPDLLRAHFGRSYA Sbjct: 181 LTILTPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLAGAAPDLLRAHFGRSYA 240 Query: 241 EWLGRVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDR 300 EWLGRVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDR Sbjct: 241 EWLGRVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDR 300 Query: 301 KGYVGRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRV 360 KGYVGRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRV Sbjct: 301 KGYVGRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRV 360 Query: 361 GALSKKDEQAAASHAVQAELPFAS 384 GALSKKDEQAAASHAVQAELPFAS Sbjct: 361 GALSKKDEQAAASHAVQAELPFAS 384 >A6T428.1 A6T428_JANMA DNA polymerase IV EC=2.7.7.7 Length = 401 Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust. Identities = 272/378 (71%), Positives = 317/378 (83%) Query: 3 NDRRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAGRG 62 N RRIAHLDMDAFYASVELLRYP+LRGQ VVIGG S P+ DG+RQY R+RDYAGRG Sbjct: 20 NGRRIAHLDMDAFYASVELLRYPELRGQPVVIGGMSVHAPLTQADGSRQYARLRDYAGRG 79 Query: 63 VVTTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLIED 122 VVTTSTYEARALGVFSAMGIMKAA+LAPDAILLP DF+AYR YSRLFK+AV +IAP IE+ Sbjct: 80 VVTTSTYEARALGVFSAMGIMKAAKLAPDAILLPVDFDAYRHYSRLFKQAVADIAPHIEN 139 Query: 123 RGIDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNGLT 182 RGIDEIYIDLS ++ +A +IK+AV AT L+CSIG+APNK+LAKI S+L+KPNGLT Sbjct: 140 RGIDEIYIDLSEHAEETHALASRIKNAVQQATGLSCSIGIAPNKLLAKICSDLEKPNGLT 199 Query: 183 ILTPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYAEW 242 ILT ADI RIWPLP RKINGIGP+AAEKL+ALG++T+ +LA A LL HFGRSYA+W Sbjct: 200 ILTQADIATRIWPLPARKINGIGPRAAEKLTALGLNTIEELAGADATLLHEHFGRSYADW 259 Query: 243 LGRVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDRKG 302 LGRVAQG+D+RPV TYSEPKS+SRETTFE +LHA+ DR L IFT LC ++A DL+RKG Sbjct: 260 LGRVAQGIDERPVVTYSEPKSVSRETTFENNLHAKRDREALGGIFTRLCERVAGDLERKG 319 Query: 303 YVGRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRVGA 362 YVGRT+GIKL++ADFR VTRD+TLP+ T DA AIRQAAGECLKR+PLD+ RLLGVR+G Sbjct: 320 YVGRTVGIKLRFADFRIVTRDLTLPAYTDDAVAIRQAAGECLKRIPLDQPFRLLGVRIGT 379 Query: 363 LSKKDEQAAASHAVQAEL 380 L++KD A +Q EL Sbjct: 380 LARKDSLPAEDPVLQGEL 397 >E5AR64.1 E5AR64_BURRH DNA polymerase IV EC=2.7.7.7 Length = 388 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 272/383 (71%), Positives = 307/383 (80%) Query: 1 MANDRRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAG 60 M RRIAHLDMDAFYASVELLRYP+LRG+AVVIGGG P LPDGTR++ R+ DYAG Sbjct: 1 MVLTRRIAHLDMDAFYASVELLRYPELRGKAVVIGGGRKAAPQTLPDGTRRFARLGDYAG 60 Query: 61 RGVVTTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLI 120 RGVVTTSTYEARALGVFSAM +MKAAQLAPDAILLPTDF++YR YSRLFK AV I Sbjct: 61 RGVVTTSTYEARALGVFSAMSMMKAAQLAPDAILLPTDFDSYRHYSRLFKAAVATFTDQI 120 Query: 121 EDRGIDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNG 180 +DRGIDEIYIDL+A D +A +IK AV AT LTCSI VAPNK+LAKI SELDKP+G Sbjct: 121 QDRGIDEIYIDLTALPDDTRALAMRIKQAVRDATGLTCSICVAPNKLLAKIGSELDKPDG 180 Query: 181 LTILTPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYA 240 +TIL+ AD+ RIWPLPVR++NGIGPKA EKL +LGI TV DLA+A P LL+ HFG SYA Sbjct: 181 MTILSIADLPTRIWPLPVRRVNGIGPKAGEKLVSLGIATVGDLAKADPGLLQEHFGHSYA 240 Query: 241 EWLGRVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDR 300 WL VA G+D+RPVQ SEPKS+SRETTFERD+H R DRA LS IFT LCV++A DL R Sbjct: 241 AWLADVAHGIDERPVQVTSEPKSMSRETTFERDMHVRHDRASLSAIFTDLCVRVAQDLTR 300 Query: 301 KGYVGRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRV 360 KGYVGRT+G+KL+YADFR VTRDV+LP PT DA IR+AA ECLKRVPLDK+LRLLGVRV Sbjct: 301 KGYVGRTVGLKLRYADFRTVTRDVSLPEPTADAVVIRRAATECLKRVPLDKRLRLLGVRV 360 Query: 361 GALSKKDEQAAASHAVQAELPFA 383 AL Q VQ +LPFA Sbjct: 361 SALRPAHAQRLVREPVQHKLPFA 383 >D5WGF6.1 D5WGF6_BURSC DNA polymerase IV EC=2.7.7.7 Length = 388 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 272/381 (71%), Positives = 310/381 (81%), Gaps = 1/381 (0%) Query: 5 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAGRGVV 64 RRIAHLDMDAFYASVELLRYP+LRG+AVVIGGG + P L DG++++ ++RDYAGRGVV Sbjct: 6 RRIAHLDMDAFYASVELLRYPELRGRAVVIGGGRNSAPQLLEDGSKRFAKLRDYAGRGVV 65 Query: 65 TTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLIEDRG 124 TTSTYEARALGVFSAMG+MKAA LAPDAILLPTDF++YR YSRLFK AVR IEDRG Sbjct: 66 TTSTYEARALGVFSAMGMMKAAALAPDAILLPTDFDSYRHYSRLFKAAVRTFTDRIEDRG 125 Query: 125 IDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNGLTIL 184 IDEIYIDL+ + ++ R+IK+AVH AT LTCSI VAPNK+LAKI SELDKP+GLTIL Sbjct: 126 IDEIYIDLTDLPGESADIGRRIKEAVHQATGLTCSICVAPNKLLAKIGSELDKPDGLTIL 185 Query: 185 TPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYAEWLG 244 TPADI R+WPLPVRK+NGIGPKAAEKL+ALG+ TV DLA A LL+ +FGRSY+ WL Sbjct: 186 TPADIPLRVWPLPVRKVNGIGPKAAEKLTALGLATVGDLAAADAGLLQDNFGRSYSAWLM 245 Query: 245 RVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDRKGYV 304 VAQG D+RPV SEPKSISRETTFERDLH R DR LS FT LCV++A DL RKGYV Sbjct: 246 EVAQGQDERPVVVESEPKSISRETTFERDLHPRHDRPALSSAFTGLCVRVADDLVRKGYV 305 Query: 305 GRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRVGALS 364 GRTIGIKL+Y DFR VTRD+TL PT DA IR+AA ECL+RV L++KLRLLGVR+ LS Sbjct: 306 GRTIGIKLRYDDFRTVTRDLTLDEPTADATEIRRAATECLRRVQLNRKLRLLGVRISTLS 365 Query: 365 KKDEQAAASH-AVQAELPFAS 384 EQA VQA+LPFAS Sbjct: 366 SASEQALKPRLPVQADLPFAS 386 >D5NCG7.1 D5NCG7_9BURK DNA polymerase IV EC=2.7.7.7 Length = 388 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 272/381 (71%), Positives = 309/381 (81%), Gaps = 1/381 (0%) Query: 5 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAGRGVV 64 RRIAHLDMDAFYASVELLRYP+LRGQAVVIGGG P L DGTR++ ++RDYAGRGVV Sbjct: 6 RRIAHLDMDAFYASVELLRYPELRGQAVVIGGGRNGVPQILEDGTRRFAKLRDYAGRGVV 65 Query: 65 TTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLIEDRG 124 TTSTYEARALGVFSAMG+MKAA LAPDAILLPTDF++YR YSRLFK AV IEDRG Sbjct: 66 TTSTYEARALGVFSAMGMMKAAMLAPDAILLPTDFDSYRHYSRLFKAAVATFTDRIEDRG 125 Query: 125 IDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNGLTIL 184 IDEIYIDL+ E+A +IK AV+ AT LTCSI VAPNK+LAKI SELDKPNGLTIL Sbjct: 126 IDEIYIDLTELPGEPREIAARIKQAVNQATGLTCSICVAPNKLLAKIGSELDKPNGLTIL 185 Query: 185 TPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYAEWLG 244 TPAD+ R+WPLPVRK+NGIGPKAAEKL+ALG+ TV DLA A LL+ HFGRSY+ WL Sbjct: 186 TPADVPLRVWPLPVRKVNGIGPKAAEKLTALGLATVGDLAAADAGLLQDHFGRSYSAWLM 245 Query: 245 RVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDRKGYV 304 ++AQG D+RPV SEPKS+SRETTFERDLH R DR LS FT LCV++A DL RKGYV Sbjct: 246 QIAQGYDERPVVVKSEPKSMSRETTFERDLHPRHDRPALSSSFTGLCVRVAEDLVRKGYV 305 Query: 305 GRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRVGALS 364 GRT+GIKL+Y DFR VTRD+TL +PT DAA IR+AA ECL+RV L++KLRLLGVRV AL+ Sbjct: 306 GRTVGIKLRYDDFRTVTRDLTLDTPTADAAEIRRAATECLRRVELNRKLRLLGVRVSALT 365 Query: 365 KKDEQAAASH-AVQAELPFAS 384 + Q VQA+LPFAS Sbjct: 366 PANAQPPQRRLPVQADLPFAS 386 >B5WE92.1 B5WE92_9BURK DNA polymerase IV EC=2.7.7.7 Length = 388 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 271/381 (71%), Positives = 310/381 (81%), Gaps = 1/381 (0%) Query: 5 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAGRGVV 64 RRIAHLDMDAFYASVELLRYP+LRG+AVVIGGG + P L DG++++ ++RDYAGRGVV Sbjct: 6 RRIAHLDMDAFYASVELLRYPELRGRAVVIGGGRNSAPQVLEDGSKRFAKLRDYAGRGVV 65 Query: 65 TTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLIEDRG 124 TTSTYEARALGVFSAMG+MKAA LAPDAILLPTDF++YR YSRLFK AVR IEDRG Sbjct: 66 TTSTYEARALGVFSAMGMMKAAALAPDAILLPTDFDSYRHYSRLFKAAVRTFTERIEDRG 125 Query: 125 IDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNGLTIL 184 IDEIYIDL+ ++ R+IK+AVH AT LTCSI VAPNK+LAKI SELDKP+GLTIL Sbjct: 126 IDEIYIDLTDVPGEPVDIGRRIKEAVHQATGLTCSICVAPNKLLAKIGSELDKPDGLTIL 185 Query: 185 TPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYAEWLG 244 TPADI R+WPLPVRK+NGIGPKAAEKL+ALG+ TV DLA A LL+ +FGRSY+ WL Sbjct: 186 TPADIPLRVWPLPVRKVNGIGPKAAEKLTALGLATVGDLAAADAGLLQDNFGRSYSAWLM 245 Query: 245 RVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDRKGYV 304 +VAQG D+RPV SEPKSISRETTFERDLH R DR LS FT LCV++A DL RKGYV Sbjct: 246 QVAQGHDERPVVVESEPKSISRETTFERDLHPRHDRPALSSAFTGLCVRVADDLVRKGYV 305 Query: 305 GRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRVGALS 364 GRTIGIKL+Y DFR VTRD+TL PT DA IR+AA ECL+RV L++KLRLLGVR+ L+ Sbjct: 306 GRTIGIKLRYDDFRTVTRDLTLDEPTADATEIRRAATECLRRVELNRKLRLLGVRISTLT 365 Query: 365 KKDEQAAASH-AVQAELPFAS 384 EQA VQA+LPFAS Sbjct: 366 SASEQALKPRLPVQADLPFAS 386 >E1TDU9.1 E1TDU9_BURSG DNA polymerase IV EC=2.7.7.7 Length = 388 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 272/381 (71%), Positives = 309/381 (81%), Gaps = 1/381 (0%) Query: 5 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAGRGVV 64 RRIAHLDMDAFYASVELLRYP+LRG+AVVIGGG + P LPDG+R++ R+RDYAGRGVV Sbjct: 6 RRIAHLDMDAFYASVELLRYPELRGKAVVIGGGRNSAPETLPDGSRRFARLRDYAGRGVV 65 Query: 65 TTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLIEDRG 124 TTSTYEARALGVFSAMG+MKAA LAP+A+LLPTDF++YR YSRLFK AV IEDRG Sbjct: 66 TTSTYEARALGVFSAMGMMKAAVLAPNAVLLPTDFDSYRHYSRLFKAAVATFTDRIEDRG 125 Query: 125 IDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNGLTIL 184 IDEIYIDL+ A +VA +IK AV+ AT LTCSI VAPNK+LAKI SELDKP+GLTIL Sbjct: 126 IDEIYIDLTDLPGEARDVAARIKQAVNQATGLTCSICVAPNKLLAKIGSELDKPDGLTIL 185 Query: 185 TPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYAEWLG 244 TPAD+ R+WPLPVR +NGIGPKAAEKL+ALGI TV DLA A LL+ HFGRSY+ WL Sbjct: 186 TPADVPLRVWPLPVRNVNGIGPKAAEKLTALGIATVGDLAAADAGLLQDHFGRSYSAWLM 245 Query: 245 RVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDRKGYV 304 RVAQG D+RPV SEPKS+SRETTFERDLH R DR LS FT LCV++A DL RKGYV Sbjct: 246 RVAQGEDERPVVVESEPKSMSRETTFERDLHPRHDRPALSSSFTGLCVRVAEDLVRKGYV 305 Query: 305 GRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRVGALS 364 G+T+GIKL+Y DFR VTRD+TL PT DAA IR+AA ECL+RV L++KLRLLGVRV ALS Sbjct: 306 GKTVGIKLRYDDFRTVTRDLTLDMPTADAAEIRRAATECLRRVELNRKLRLLGVRVSALS 365 Query: 365 KKDEQAAASH-AVQAELPFAS 384 Q VQA+LPFAS Sbjct: 366 LASAQPPQRRLPVQADLPFAS 386 >A4GAC8.2 A4GAC8_HERAR DNA polymerase IV EC=2.7.7.7 Length = 386 Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust. Identities = 261/361 (72%), Positives = 306/361 (84%) Query: 5 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAGRGVV 64 R IAHLDMDAFYASVELLRYP+LRG+A+VIG GSA PV DG+R+Y R+RDY GRGVV Sbjct: 6 RHIAHLDMDAFYASVELLRYPELRGRALVIGAGSAHEPVLQADGSRRYARLRDYTGRGVV 65 Query: 65 TTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLIEDRG 124 TTSTYEARALGVFSAMG+MKAA+LAPDAILLPTDF AYR YSRLFK A IAP +EDRG Sbjct: 66 TTSTYEARALGVFSAMGLMKAAKLAPDAILLPTDFTAYRHYSRLFKAAAGAIAPQMEDRG 125 Query: 125 IDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNGLTIL 184 IDEIY+DL+ +D VA++IKDAV AAT L+CSIGVAPNK+LAKI S+L+KPNGLTIL Sbjct: 126 IDEIYLDLNDQTDDIAVVAQRIKDAVVAATGLSCSIGVAPNKLLAKICSDLEKPNGLTIL 185 Query: 185 TPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYAEWLG 244 + ADI RIWPLPV+KINGIGPK+ EKL+ALGI T+ LA P +LRA+FGR Y+ WL Sbjct: 186 SEADIPTRIWPLPVKKINGIGPKSTEKLAALGILTIEQLANCDPAVLRANFGRIYSAWLM 245 Query: 245 RVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDRKGYV 304 RVAQG+D+R + T SEPKSISRE+T ERDLHA+ DR++LS +FT LC ++A DL RK Y+ Sbjct: 246 RVAQGIDEREIVTRSEPKSISRESTLERDLHAKLDRSELSALFTRLCERVADDLVRKEYL 305 Query: 305 GRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRVGALS 364 GRT+GIKL+YADF VTRD+TLP+PT DA AIRQAAGECL+RVPLDK+LRLLGVR+ +LS Sbjct: 306 GRTVGIKLRYADFSTVTRDLTLPAPTNDAQAIRQAAGECLRRVPLDKRLRLLGVRITSLS 365 Query: 365 K 365 K Sbjct: 366 K 366 >Q13PR9.1 Q13PR9_BURXL DNA polymerase IV EC=2.7.7.7 Length = 388 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/381 (70%), Positives = 308/381 (80%), Gaps = 1/381 (0%) Query: 5 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAGRGVV 64 RRIAHLDMDAFYASVELLRYP+LRGQAVVIGGG P L DGTR++ ++RDYAGRGVV Sbjct: 6 RRIAHLDMDAFYASVELLRYPELRGQAVVIGGGRNGVPQTLEDGTRRFAKLRDYAGRGVV 65 Query: 65 TTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLIEDRG 124 TTSTYEARALGVFSAMG+MKAA LAPDAILLPTDF++YR YSRLFK AV IEDRG Sbjct: 66 TTSTYEARALGVFSAMGMMKAAVLAPDAILLPTDFDSYRHYSRLFKAAVATFTDRIEDRG 125 Query: 125 IDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNGLTIL 184 IDEIYIDL+ E+A +IK AV+ AT LTCSI VAPNK+LAKI SELDKP+GLTIL Sbjct: 126 IDEIYIDLTELPGEPREIAARIKQAVNQATGLTCSICVAPNKLLAKIGSELDKPDGLTIL 185 Query: 185 TPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYAEWLG 244 TPAD+ R+WPLPVRK+NGIGPKAAEKL+ALG+ TV DLA A LL+ HFGRSY+ WL Sbjct: 186 TPADVPLRVWPLPVRKVNGIGPKAAEKLTALGLATVGDLAAADAGLLQDHFGRSYSAWLM 245 Query: 245 RVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDRKGYV 304 ++AQG D+RPV SEPKS+SRETTFERDLH R DR LS FT LCV++A DL RKGYV Sbjct: 246 QIAQGHDERPVVVESEPKSMSRETTFERDLHPRHDRPALSSSFTGLCVRVAEDLVRKGYV 305 Query: 305 GRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRVGALS 364 GRT+GIKL+Y DFR VTRD+TL +PT DAA IR+AA ECL+RV L++KLRLLGVRV AL+ Sbjct: 306 GRTVGIKLRYDDFRTVTRDLTLDAPTADAAEIRRAATECLRRVELNRKLRLLGVRVSALT 365 Query: 365 KKDEQAAASH-AVQAELPFAS 384 + VQA+LPFAS Sbjct: 366 PANALTPPRRLPVQADLPFAS 386 >Q1LHF9.1 Q1LHF9_RALME DNA polymerase IV EC=2.7.7.7 Length = 393 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 268/378 (70%), Positives = 304/378 (80%) Query: 5 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGSATRPVELPDGTRQYFRMRDYAGRGVV 64 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGG P +LPDGTR+Y R+RDYAGRGVV Sbjct: 6 RRIAHLDMDAFYASVELLRYPDLRGQAVVIGGGRNAVPEDLPDGTRRYARLRDYAGRGVV 65 Query: 65 TTSTYEARALGVFSAMGIMKAAQLAPDAILLPTDFEAYRKYSRLFKEAVRNIAPLIEDRG 124 TTSTYEARALGVFSAMG+MKAA+LAPDAILLPTDF+AYR+YS LFK AVR+ IEDRG Sbjct: 66 TTSTYEARALGVFSAMGMMKAAKLAPDAILLPTDFDAYRRYSGLFKAAVRSFTEQIEDRG 125 Query: 125 IDEIYIDLSAWSDTAPEVARQIKDAVHAATSLTCSIGVAPNKMLAKISSELDKPNGLTIL 184 IDEIYIDL+ A +VA +IK AV+AAT LTCSI VAPNK+LAKI SELDKP+GLTIL Sbjct: 126 IDEIYIDLTDIDGEARDVAARIKAAVNAATGLTCSICVAPNKLLAKIGSELDKPDGLTIL 185 Query: 185 TPADIERRIWPLPVRKINGIGPKAAEKLSALGIDTVADLARAAPDLLRAHFGRSYAEWLG 244 TPADI RIWPL RK+NGIGPKAAEKL+A+GI+TV LA A LL+AHFGR+YA WL Sbjct: 186 TPADIPTRIWPLAARKVNGIGPKAAEKLAAIGIETVGQLAEADIALLQAHFGRNYASWLA 245 Query: 245 RVAQGVDDRPVQTYSEPKSISRETTFERDLHARADRAQLSEIFTALCVKLAADLDRKGYV 304 VA G D+R V SEPKS+SRETTFERDLH R DR LSE FT LC+++A DL RKGYV Sbjct: 246 EVANGRDERQVVVSSEPKSMSRETTFERDLHPRGDRPVLSEQFTRLCMRVAEDLRRKGYV 305 Query: 305 GRTIGIKLKYADFRGVTRDVTLPSPTGDAAAIRQAAGECLKRVPLDKKLRLLGVRVGALS 364 GRT+GIKL++ DF VTRD+TL + T D A IR A ECLKR+PL++++RLLGVRV AL Sbjct: 306 GRTVGIKLRFDDFHTVTRDLTLTAHTADGATIRHGATECLKRIPLERRIRLLGVRVSALI 365 Query: 365 KKDEQAAASHAVQAELPF 382 +Q VQ EL F Sbjct: 366 PAADQGDDPAPVQEELRF 383