BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0087.p (176 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1RPW8.1 A1RPW8_SHESW Fimbrial protein 181 5e-44 Q0BBT4.1 Q0BBT4_BURCM Fimbrial protein 156 1e-36 C4UT84.1 C4UT84_YERRO Putative uncharacterized protein 149 1e-34 C4SRV2.1 C4SRV2_YERFR Putative uncharacterized protein 149 2e-34 A1JI62.1 A1JI62_YERE8 Putative fimbrial protein 147 8e-34 E7B788.1 E7B788_YERE1 Fimbrial protein 145 2e-33 F0KQ67.1 F0KQ67_YERE3 Putative fimbrial protein 145 2e-33 Q8D0C5.1 Q8D0C5_YERPE Putative fimbrial 142 1e-32 Q9ZC32.1 Q9ZC32_YERPE Similar to pilin F17d-A 142 2e-32 Q66B59.1 Q66B59_YERPS Fimbrial protein 142 2e-32 >A1RPW8.1 A1RPW8_SHESW Fimbrial protein Length = 176 Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 105/178 (58%), Positives = 124/178 (69%), Gaps = 5/178 (2%) Query: 2 MKKHLAVLLLLSPSL--VLAAGNTITFRGQVHAQTCQVSVDGSA-NPVVLLPTVATGDLA 58 MKK +L+L + A NTITF G+V QTC+V+++G+A NP VLLPTV+T LA Sbjct: 1 MKKLTLSILVLGALFGTSVQANNTITFLGEVSDQTCEVAINGNAANPSVLLPTVSTAQLA 60 Query: 59 AVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKSV 118 GS AGETPF +SVSGCT +AT AL IKT FL + T+ N+ N GTA NVALQL SV Sbjct: 61 TAGSVAGETPFTISVSGCTVNATQALPIKTVFLGNNVTTAGNLGNTGTATNVALQLLDSV 120 Query: 119 GGDAIKLVGGSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALDYL 176 GG I L GS +VDGL +AAGA SASH FAV+YISE G A AG VI SVQYA+ YL Sbjct: 121 GGTEINLTVGS--AVDGLNVAAGADSASHDFAVQYISETGSATAGRVISSVQYAVSYL 176 >Q0BBT4.1 Q0BBT4_BURCM Fimbrial protein Length = 202 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 92/179 (51%), Positives = 117/179 (65%), Gaps = 4/179 (2%) Query: 1 MMKKHLAVLLLLS-PSLVLA-AGNTITFRGQVHAQTCQVSVDGSAN-PVVLLPTVATGDL 57 +MKK+L VL+L + P A + NTI F+G+V QTC V+V+G+A+ P VLLPTV+T DL Sbjct: 23 LMKKNLLVLMLAAAPVFAFAQSSNTIQFQGEVTDQTCAVTVNGNASSPTVLLPTVSTADL 82 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 A G AGET F + +SGCTA A I T F+ + T+ N+ N GTA NVALQL Sbjct: 83 ATAGGTAGETHFTLGLSGCTAPTQTARAINTVFVGNQVTTNGNLGNTGTATNVALQLLDP 142 Query: 118 VGGDA-IKLVGGSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALDY 175 L G S + GL +A G TSAS+ FAVRYI+ENG A AGSV+GSVQYA++Y Sbjct: 143 ANATTPFNLSGASGYAAPGLSLAVGDTSASYDFAVRYITENGSATAGSVLGSVQYAINY 201 >C4UT84.1 C4UT84_YERRO Putative uncharacterized protein Length = 176 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/182 (52%), Positives = 121/182 (66%), Gaps = 12/182 (6%) Query: 1 MMKKHLAVLLL-LSPSLVLAA-GNTITFRGQVHAQTCQVSVDG-SANPVVLLPTVATGDL 57 M K LA+ L S ++ +AA NTITF+G+V AQTC VSV+G ANP+VLLPTV++ DL Sbjct: 1 MNKITLAIALFSASTTIAMAASNNTITFQGEVTAQTCSVSVNGVDANPMVLLPTVSSSDL 60 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 A G AG+T F + V+GC +SA D + IKT F+A+ T+ N+ N GTA NV LQL K Sbjct: 61 DASGKTAGKTTFTLGVTGCASSAAD-IDIKTVFVANQVTTSGNLGNTGTATNVELQLLK- 118 Query: 118 VGGDAIKLVG---GSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALD 174 DA G S+V+ DG+ + AG TSA H FAV+Y + G AG GSVIGSVQYA+ Sbjct: 119 ---DATTTTGINLNSNVAQDGIVLKAGDTSAEHDFAVQYYAT-GQAGPGSVIGSVQYAVS 174 Query: 175 YL 176 YL Sbjct: 175 YL 176 >C4SRV2.1 C4SRV2_YERFR Putative uncharacterized protein Length = 176 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/178 (50%), Positives = 120/178 (67%), Gaps = 6/178 (3%) Query: 1 MMKKHLAVLLLLSPSLVLAA--GNTITFRGQVHAQTCQVSVDGSAN-PVVLLPTVATGDL 57 M K +A++LL P +VLAA NTI F+G+V QTC V ++G+AN PVVLLPTV+T +L Sbjct: 1 MGKTLIALVLLALPGVVLAATSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNL 60 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 V S AG+T F ++++GC + D KI + F TS N+ N+GTA+NVA+QL + Sbjct: 61 NQVNSVAGKTNFTINLTGCNIAIQDT-KISSVFQGMNVTSAGNLGNVGTAQNVAIQLLDT 119 Query: 118 VGGDAIKLVGGSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALDY 175 G I++ GGS VSV G+ +AAGATSAS A +YI+E G A AGSVI S QYA+ Y Sbjct: 120 -NGAPIRMSGGS-VSVPGITLAAGATSASQDLAAQYITEEGRATAGSVIASAQYAITY 175 >A1JI62.1 A1JI62_YERE8 Putative fimbrial protein Length = 176 Score = 147 bits (370), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 93/182 (51%), Positives = 116/182 (63%), Gaps = 12/182 (6%) Query: 1 MMKKHLAVLLLLSPSLVL--AAGNTITFRGQVHAQTCQVSVDG-SANPVVLLPTVATGDL 57 M K LA+ L + + V A+ NTITF+G+V AQTC V+V+G ANP+VLLPTV++GDL Sbjct: 1 MNKITLAMALFAASTTVAMAASNNTITFQGEVTAQTCSVTVNGLDANPMVLLPTVSSGDL 60 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 A G AG+T F + VSGC A D + IKT F+ + T+ N+ N GTA NV LQL K Sbjct: 61 DASGKTAGKTTFTLGVSGCATGAAD-IDIKTVFVGNQVTTAGNLKNTGTASNVDLQLLK- 118 Query: 118 VGGDAIKLVG---GSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALD 174 DA G SSV DG+ + AG TSA H FAV+Y + G AG GSVI SVQYA+ Sbjct: 119 ---DATTTTGIDLNSSVGQDGIVLKAGDTSAEHDFAVQYFAT-GQAGPGSVIASVQYAVS 174 Query: 175 YL 176 YL Sbjct: 175 YL 176 >E7B788.1 E7B788_YERE1 Fimbrial protein Length = 176 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/182 (50%), Positives = 116/182 (63%), Gaps = 12/182 (6%) Query: 1 MMKKHLAVLLLLSPSLVL--AAGNTITFRGQVHAQTCQVSVDG-SANPVVLLPTVATGDL 57 M K LA+ L + + V A+ NTITF+G+V AQTC V+V+G ANP+VLLPTV++GDL Sbjct: 1 MNKITLAMALFAASTTVAMAASNNTITFQGEVTAQTCSVTVNGLDANPMVLLPTVSSGDL 60 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 A G AG+T F + VSGC A D + IKT F+ + T+ N+ N GTA NV LQL K Sbjct: 61 NASGKTAGKTTFTLGVSGCATGAAD-IDIKTVFVGNQVTTAGNLKNTGTASNVDLQLLK- 118 Query: 118 VGGDAIKLVG---GSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALD 174 DA +G S V DG+ + AG TSA H FAV+Y + G AG GSVI SVQYA+ Sbjct: 119 ---DATTTIGIDLNSGVGQDGIVLKAGDTSAEHDFAVQYFAT-GQAGPGSVIASVQYAVS 174 Query: 175 YL 176 YL Sbjct: 175 YL 176 >F0KQ67.1 F0KQ67_YERE3 Putative fimbrial protein Length = 176 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/182 (50%), Positives = 116/182 (63%), Gaps = 12/182 (6%) Query: 1 MMKKHLAVLLLLSPSLVL--AAGNTITFRGQVHAQTCQVSVDG-SANPVVLLPTVATGDL 57 M K LA+ L + + V A+ NTITF+G+V AQTC V+V+G ANP+VLLPTV++GDL Sbjct: 1 MNKITLAMALFAASTTVAMAASNNTITFQGEVTAQTCSVTVNGLDANPMVLLPTVSSGDL 60 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 A G AG+T F + VSGC A D + IKT F+ + T+ N+ N GTA NV LQL K Sbjct: 61 NASGKTAGKTTFTLGVSGCATGAAD-IDIKTVFVGNQVTTAGNLKNTGTASNVDLQLLK- 118 Query: 118 VGGDAIKLVG---GSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALD 174 DA +G S V DG+ + AG TSA H FAV+Y + G AG GSVI SVQYA+ Sbjct: 119 ---DATTTIGIDLNSGVGQDGIVLKAGDTSAEHDFAVQYFAT-GQAGPGSVIASVQYAVS 174 Query: 175 YL 176 YL Sbjct: 175 YL 176 >Q8D0C5.1 Q8D0C5_YERPE Putative fimbrial Length = 189 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/178 (47%), Positives = 116/178 (65%), Gaps = 7/178 (3%) Query: 2 MKKHLAVLLL-LSPSLVLA--AGNTITFRGQVHAQTCQVSVDGSAN-PVVLLPTVATGDL 57 MKK L L+L + P + A + NTI F+G+V QTC V ++G+AN PVVLLPTV+T +L Sbjct: 14 MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNL 73 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 V S AG+T F ++++GC + D +I + F TSG N+ N+GTA+NVA+QL Sbjct: 74 NQVNSVAGKTNFTINLTGCNIAIQDT-QISSVFQGMNVTSGGNLGNIGTARNVAIQLIDP 132 Query: 118 VGGDAIKLVGGSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALDY 175 G I++ GGS V V G+ +A GATSAS + +YI+E G A AGSVI S QYA+ Y Sbjct: 133 -RGTPIRMSGGS-VEVPGITLATGATSASQDLSAQYITEEGQATAGSVIASAQYAITY 188 >Q9ZC32.1 Q9ZC32_YERPE Similar to pilin F17d-A Length = 176 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/178 (47%), Positives = 116/178 (65%), Gaps = 7/178 (3%) Query: 2 MKKHLAVLLL-LSPSLVLA--AGNTITFRGQVHAQTCQVSVDGSAN-PVVLLPTVATGDL 57 MKK L L+L + P + A + NTI F+G+V QTC V ++G+AN PVVLLPTV+T +L Sbjct: 1 MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNL 60 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 V S AG+T F ++++GC + D +I + F TSG N+ N+GTA+NVA+QL Sbjct: 61 NQVNSVAGKTNFTINLTGCNIAIQDT-QISSVFQGMNVTSGGNLGNIGTARNVAIQLIDP 119 Query: 118 VGGDAIKLVGGSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALDY 175 G I++ GGS V V G+ +A GATSAS + +YI+E G A AGSVI S QYA+ Y Sbjct: 120 -RGTPIRMSGGS-VEVPGITLATGATSASQDLSAQYITEEGQATAGSVIASAQYAITY 175 >Q66B59.1 Q66B59_YERPS Fimbrial protein Length = 176 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/178 (47%), Positives = 116/178 (65%), Gaps = 7/178 (3%) Query: 2 MKKHLAVLLL-LSPSLVLA--AGNTITFRGQVHAQTCQVSVDGSAN-PVVLLPTVATGDL 57 MKK L L+L + P + A + NTI F+G+V QTC V ++G+AN PVVLLPTV+T +L Sbjct: 1 MKKTLVTLMLFILPGIAFAETSNNTIKFQGEVAEQTCMVDINGTANTPVVLLPTVSTSNL 60 Query: 58 AAVGSAAGETPFVVSVSGCTASATDALKIKTQFLASAATSGNNIPNLGTAKNVALQLRKS 117 V S AG+T F ++++GC + D +I + F TSG N+ N+GTA+NVA+QL Sbjct: 61 NQVNSVAGKTNFTINLTGCNIAIQDT-QISSVFQGMNVTSGGNLGNIGTARNVAIQLIDP 119 Query: 118 VGGDAIKLVGGSSVSVDGLEMAAGATSASHTFAVRYISENGVAGAGSVIGSVQYALDY 175 G I++ GGS V V G+ +A GATSAS + +YI+E G A AGSVI S QYA+ Y Sbjct: 120 -RGTPIRMSGGS-VEVPGITLATGATSASQDLSAQYITEEGQATAGSVIASAQYAITY 175