BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0067.p (170 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQL5.1 D8IQL5_HERSS Putative uncharacterized protein 325 1e-87 B7WRV6.1 B7WRV6_COMTE Type IV pilus modification protein PilV 85 4e-15 Q21V27.1 Q21V27_RHOFD Methylation 74 5e-12 A1WLQ3.1 A1WLQ3_VEREI Type IV pilus modification protein PilV 74 9e-12 F0QBK9.1 F0QBK9_ACIAP Type IV pilus modification protein PilV 70 1e-10 A1TT17.1 A1TT17_ACIAC Type IV pilus modification protein PilV 67 7e-10 >D8IQL5.1 D8IQL5_HERSS Putative uncharacterized protein Length = 170 Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 167/170 (98%), Positives = 167/170 (98%) Query: 1 MRAPALVSGFSLIEVLVAMLVVGTGALAMVMLQLHALRSSHDSALHARATLMALELAELR 60 MRAPALVSGFSLIEVLVAMLVVGTGALAMVMLQLHALRSSHDSALHARATLMALELAELR Sbjct: 1 MRAPALVSGFSLIEVLVAMLVVGTGALAMVMLQLHALRSSHDSALHARATLMALELAELR 60 Query: 61 AALAPAPGMADPTLFAFDGGRAPGSHIACSNTPCSAADFASAAIADWSARLARGFPGARV 120 AALAPAPGMADPTLFAFDGGRAPGSHIACSNTPCSAADFASAAIADWSARL RGFPGARV Sbjct: 61 AALAPAPGMADPTLFAFDGGRAPGSHIACSNTPCSAADFASAAIADWSARLVRGFPGARV 120 Query: 121 AVCRDGGQTPQQSWSCDLAPAAPVIFRLSWRRPGTASAAALPMLTLALGH 170 AVCRDGGQTPQQSWSCD PAAPVIFRLSWRRPGTASAAALPMLTLALGH Sbjct: 121 AVCRDGGQTPQQSWSCDHTPAAPVIFRLSWRRPGTASAAALPMLTLALGH 170 >B7WRV6.1 B7WRV6_COMTE Type IV pilus modification protein PilV Length = 212 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 16/169 (9%) Query: 1 MRAPALVSGFSLIEVLVAMLVVGTGALAMVMLQLHALRSSHDSALHARATLMALELAEL- 59 +R+ A GF+LIEVLVA++V G L MV +Q A++++ ++ L ++AT +A ELAE+ Sbjct: 14 IRSSAYDRGFTLIEVLVAIIVFSFGLLGMVGMQAFAIQANREARLQSQATSLARELAEMM 73 Query: 60 ---RAALAPAPGMADPTLFAFDGGR---APGSHIACSNTPCSA-ADFASAAIADWSARLA 112 + +P L F G + S+ + CS+ D ASA + DW R+ Sbjct: 74 RGNKQVAVLTTTATNPYLGTFAVGSLTPSTASYCLSVGSSCSSTTDVASAQMTDWLTRVD 133 Query: 113 RGFPGARVAVCRDGGQTPQQS-----WSCDLAPAAPVIF-RLSWRRPGT 155 PGAR++VC DG P S WSC + A +IF ++ W + T Sbjct: 134 ATLPGARISVCLDGA--PYDSNGLPQWSCTPSTANEIIFIKIGWTQSST 180 >Q21V27.1 Q21V27_RHOFD Methylation Length = 205 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 81/167 (48%), Gaps = 28/167 (16%) Query: 9 GFSLIEVLVAMLVVGTGALAMVMLQLHALRSSHDSALHARATLMALELAE---------L 59 GFS++EVLVA++++ G L V +Q A++S+ ++ A AT A ELAE + Sbjct: 24 GFSIVEVLVAIIILSVGMLGAVGMQATAMQSNKEARNQAAATTFARELAEKMRGNHTVAI 83 Query: 60 RAALAPAPGMADPTLFAFDGGRAPGSHIACSNTPC-SAADFASAAIADWSARLARGFPGA 118 +A A P + D TL D P + C C + D A+ +ADW R+ P Sbjct: 84 KADSAENPYIFDATLNIND--TIPTPTVNCFLDGCPTVKDAATWDVADWQGRVQATLPTP 141 Query: 119 RVAVCRDGGQTPQQS-----WSC----DLAPAAPVIFRLSWRRPGTA 156 RV VC D QTP S W C D+A + ++SW R TA Sbjct: 142 RVKVCFD--QTPFDSAGKPQWDCTDDGDIA-----VLKMSWTRKNTA 181 >A1WLQ3.1 A1WLQ3_VEREI Type IV pilus modification protein PilV Length = 223 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 15/164 (9%) Query: 4 PALVSGFSLIEVLVAMLVVGTGALAMVMLQLHALRSSHDSALHARATLMALELAEL---R 60 P GFSL+EVLVA++++ L V +Q +AL+++ ++ L A+A ++A ELAE+ Sbjct: 9 PGPSKGFSLLEVLVAIVILTFAILGTVGMQGYALQANREARLQAQAVMLANELAEMMRGN 68 Query: 61 AALAPAPGMADPTLFAFDGG---RAPGSHIACSNTPCSAADFASAAIADWSARLARGFPG 117 A+A P ++P + R + CS+T + A A + DW AR+ P Sbjct: 69 NAIAVHPKDSNPYMQQDASNYCLRVANASTGCSST----TEVAQAQMTDWLARVHADLPQ 124 Query: 118 ARVAVCRDGGQTPQQS----WSCDLAPAAPVIFRLSWRRPGTAS 157 A+V VC DG +S W CD A I ++ W R T + Sbjct: 125 AKVKVCFDGAPYDTESGLAKWDCDDAGDIAYI-KIGWTRRSTNT 167 >F0QBK9.1 F0QBK9_ACIAP Type IV pilus modification protein PilV Length = 225 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 19/170 (11%) Query: 8 SGFSLIEVLVAMLVVGTGALAMVMLQLHALRSSHDSALHARATLMALELAELRAALAPAP 67 SGF+LIEVLV+++V+ G L +V +Q AL+S+ ++ L A+A +A E+AE+ Sbjct: 26 SGFTLIEVLVSIVVLSFGILGLVGVQAFALQSTREARLQAQAANLAREMAEMMRGNNQIG 85 Query: 68 GMAD----PTLFAFDGGRAPGSHIAC----SNTPCSAAD-FASAAIADWSARLARGFPGA 118 +D P L +P + C S++ C+ A A + DW RL PGA Sbjct: 86 IKSDASLNPYLINLQSPLSPATPSYCLGVASSSACADGTAVARAELTDWLTRLDAALPGA 145 Query: 119 RVAVC-----RDGGQTPQQSWSCDLAPAA---PVIFRLSWRRPGTASAAA 160 RV +C D PQ W+C A + ++ W R T A+A Sbjct: 146 RVVICFDKAPYDSNGMPQ--WNCTAGTAGVDEVAVIKIGWTRKSTLRASA 193 >A1TT17.1 A1TT17_ACIAC Type IV pilus modification protein PilV Length = 225 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 19/170 (11%) Query: 8 SGFSLIEVLVAMLVVGTGALAMVMLQLHALRSSHDSALHARATLMALELAELRAALAPAP 67 SGF+L+EVLV+++V+ G L +V +Q AL+S+ ++ L A+A +A E+ EL Sbjct: 26 SGFTLVEVLVSIVVLSFGILGLVGVQAFALQSTREARLQAQAANLAREMTELMRGNNQIA 85 Query: 68 GMAD----PTLFAFDGGRAPGSHIAC----SNTPCSAAD-FASAAIADWSARLARGFPGA 118 +D P L +P + C S++ C+ A A + DW RL PGA Sbjct: 86 IKSDASLNPYLINLQSPLSPATANYCLGVASSSACADGTAVARAELTDWLTRLDAALPGA 145 Query: 119 RVAVCRDGGQTPQQS-----WSCDLAPAA---PVIFRLSWRRPGTASAAA 160 RV +C D + P S W C A + ++ W R T A+A Sbjct: 146 RVVICFD--KAPYDSNGMPRWDCTPGAAGVDEVAVVKIGWTRKSTLRASA 193