BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0358.p         (55 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J1S8.1 D8J1S8_HERSS 50S ribosomal protein L33                       110   5e-23
F1W289.1 F1W289_9BURK LSU ribosomal protein L33p                      108   3e-22
A6T146.1 RL33_JANMA 50S ribosomal protein L33                         107   8e-22
A4G7W1.1 RL33_HERAR 50S ribosomal protein L33                         106   1e-21
E5AN05.1 E5AN05_BURRH 50S ribosomal protein L33                       100   6e-20
C3XD52.1 C3XD52_OXAFO 50S ribosomal protein L33                       100   8e-20
B0LFR2.1 B0LFR2_9BACT 50S ribosomal protein L33                        98   5e-19
C5T6L8.1 C5T6L8_ACIDE 50S ribosomal protein L33                        98   5e-19
A1VS85.1 RL33_POLNA 50S ribosomal protein L33                          96   1e-18
C6TV18.1 C6TV18_BURPS 50S ribosomal protein L33                        96   1e-18

>D8J1S8.1 D8J1S8_HERSS 50S ribosomal protein L33
          Length = 55

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK
Sbjct: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55


>F1W289.1 F1W289_9BURK LSU ribosomal protein L33p
          Length = 55

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 54/55 (98%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEK+SIMKFDPK RKHVEYKETKIK
Sbjct: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKMSIMKFDPKVRKHVEYKETKIK 55


>A6T146.1 RL33_JANMA 50S ribosomal protein L33
          Length = 55

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEK++IMKFDPK RKHVEYKETKIK
Sbjct: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKMAIMKFDPKVRKHVEYKETKIK 55


>A4G7W1.1 RL33_HERAR 50S ribosomal protein L33
          Length = 55

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEK+SI+KFDPK RKHVEYKETKIK
Sbjct: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKMSIIKFDPKVRKHVEYKETKIK 55


>E5AN05.1 E5AN05_BURRH 50S ribosomal protein L33
          Length = 55

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 51/55 (92%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAK  RDKIKLESTAGTGHFYTTTKNKRT PEK++IMKFDP ARKHVEYKETKIK
Sbjct: 1  MAKGARDKIKLESTAGTGHFYTTTKNKRTMPEKMAIMKFDPVARKHVEYKETKIK 55


>C3XD52.1 C3XD52_OXAFO 50S ribosomal protein L33
          Length = 55

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 53/55 (96%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAK+GR+KIKLESTAGTGHFYTTTKNKRTTP+KI I+KFDPKARKHV YKETKIK
Sbjct: 1  MAKAGREKIKLESTAGTGHFYTTTKNKRTTPDKIEIVKFDPKARKHVPYKETKIK 55


>B0LFR2.1 B0LFR2_9BACT 50S ribosomal protein L33
          Length = 55

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 50/55 (90%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAK+GRDKIKLESTAGTGHFYTT KNKRT P K+ IMKFDPKARKHV YKETKIK
Sbjct: 1  MAKTGRDKIKLESTAGTGHFYTTDKNKRTMPAKMEIMKFDPKARKHVMYKETKIK 55


>C5T6L8.1 C5T6L8_ACIDE 50S ribosomal protein L33
          Length = 56

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 51/54 (94%)

Query: 2  AKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          +K GRDKIKLESTAGTGHFYTTTKNK+T PEK++IMKFDPKARKHVEYKE K+K
Sbjct: 3  SKGGRDKIKLESTAGTGHFYTTTKNKKTMPEKMAIMKFDPKARKHVEYKEMKLK 56


>A1VS85.1 RL33_POLNA 50S ribosomal protein L33
          Length = 55

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 51/55 (92%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAK GR+KIKL+STAGTGHFYTT KNK+TTPEK+ IMKFDPKARKHVEYKE K+K
Sbjct: 1  MAKGGREKIKLQSTAGTGHFYTTDKNKKTTPEKMLIMKFDPKARKHVEYKEIKLK 55


>C6TV18.1 C6TV18_BURPS 50S ribosomal protein L33
          Length = 55

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 48/55 (87%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55
          MAK  RDKIKLESTAGTGHFYTTTKNKR  PEK+ IMKFDP ARKHV YKETKIK
Sbjct: 1  MAKGARDKIKLESTAGTGHFYTTTKNKRNMPEKMEIMKFDPVARKHVAYKETKIK 55