BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0357.p (66 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6T145.1 A6T145_JANMA 50S ribosomal protein L28 132 2e-29 D8J1S9.1 D8J1S9_HERSS 50S ribosomal protein L28 132 2e-29 A4G7W0.1 RL28_HERAR 50S ribosomal protein L28 129 1e-28 B0LFR3.1 B0LFR3_9BACT 50S ribosomal protein L28 129 1e-28 F1W290.1 F1W290_9BURK LSU ribosomal protein L28p 125 2e-27 Q1LJD3.1 RL28_RALME 50S ribosomal protein L28 122 2e-26 B3R6F8.1 RL28_CUPTR 50S ribosomal protein L28 121 4e-26 Q46XN9.1 RL28_CUPPJ 50S ribosomal protein L28 121 4e-26 Q0K7B2.1 RL28_CUPNH 50S ribosomal protein L28 121 4e-26 A4SZN3.1 RL28_POLSQ 50S ribosomal protein L28 119 1e-25 >A6T145.1 A6T145_JANMA 50S ribosomal protein L28 Length = 112 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/66 (98%), Positives = 66/66 (100%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLAD+R Sbjct: 47 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADMR 106 Query: 61 ARGEKV 66 ARGEKV Sbjct: 107 ARGEKV 112 >D8J1S9.1 D8J1S9_HERSS 50S ribosomal protein L28 Length = 78 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/66 (100%), Positives = 66/66 (100%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 72 Query: 61 ARGEKV 66 ARGEKV Sbjct: 73 ARGEKV 78 >A4G7W0.1 RL28_HERAR 50S ribosomal protein L28 Length = 78 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/66 (96%), Positives = 65/66 (98%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVL D+R Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLVDMR 72 Query: 61 ARGEKV 66 ARGEKV Sbjct: 73 ARGEKV 78 >B0LFR3.1 B0LFR3_9BACT 50S ribosomal protein L28 Length = 78 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/66 (95%), Positives = 65/66 (98%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDK+GIDAVL D+R Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKVGIDAVLVDMR 72 Query: 61 ARGEKV 66 ARGEKV Sbjct: 73 ARGEKV 78 >F1W290.1 F1W290_9BURK LSU ribosomal protein L28p Length = 66 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/66 (93%), Positives = 64/66 (96%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQ RRIFVESENRWVSLRLSNAGLRVIDK+GIDAVL D+R Sbjct: 1 MVGNNVSHANNKTKRRFLPNLQRRRIFVESENRWVSLRLSNAGLRVIDKLGIDAVLVDMR 60 Query: 61 ARGEKV 66 ARGEKV Sbjct: 61 ARGEKV 66 >Q1LJD3.1 RL28_RALME 50S ribosomal protein L28 Length = 77 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/64 (93%), Positives = 62/64 (96%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRR FVESENRWVSLR+SNAGLR+IDK GIDAVLADLR Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLIDKKGIDAVLADLR 72 Query: 61 ARGE 64 ARGE Sbjct: 73 ARGE 76 >B3R6F8.1 RL28_CUPTR 50S ribosomal protein L28 Length = 77 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 59/64 (92%), Positives = 62/64 (96%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRR FVESENRWVSLR+SNAGLR+IDK GID+VLADLR Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLIDKKGIDSVLADLR 72 Query: 61 ARGE 64 ARGE Sbjct: 73 ARGE 76 >Q46XN9.1 RL28_CUPPJ 50S ribosomal protein L28 Length = 77 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 59/64 (92%), Positives = 62/64 (96%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRR FVESENRWVSLR+SNAGLR+IDK GID+VLADLR Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLIDKKGIDSVLADLR 72 Query: 61 ARGE 64 ARGE Sbjct: 73 ARGE 76 >Q0K7B2.1 RL28_CUPNH 50S ribosomal protein L28 Length = 77 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 59/64 (92%), Positives = 62/64 (96%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRR FVESENRWVSLR+SNAGLR+IDK GID+VLADLR Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLIDKKGIDSVLADLR 72 Query: 61 ARGE 64 ARGE Sbjct: 73 ARGE 76 >A4SZN3.1 RL28_POLSQ 50S ribosomal protein L28 Length = 77 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/64 (90%), Positives = 62/64 (96%) Query: 1 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIGIDAVLADLR 60 MVGNNVSHANNKTKRRFLPNLQNRR +VESENRW+SLRL+NAGLRVIDK GIDAVL+DLR Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRFWVESENRWISLRLTNAGLRVIDKNGIDAVLSDLR 72 Query: 61 ARGE 64 ARGE Sbjct: 73 ARGE 76