BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0344.p (64 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUS9.1 D8IUS9_HERSS 50S ribosomal subunit L29 protein 125 1e-27 A6T3J6.1 RL29_JANMA 50S ribosomal protein L29 102 2e-20 A4G9T0.1 RL29_HERAR 50S ribosomal protein L29 102 2e-20 C3XCQ0.1 C3XCQ0_OXAFO 50S ribosomal protein L29 100 1e-19 C3X6H9.1 C3X6H9_OXAFO 50S ribosomal protein L29 95 3e-18 F1VY54.1 F1VY54_9BURK LSU ribosomal protein L29p (L35e) 95 4e-18 Q1LI45.1 RL29_RALME 50S ribosomal protein L29 95 4e-18 B3R7R5.1 RL29_CUPTR 50S ribosomal protein L29 95 4e-18 Q46WF2.1 RL29_CUPPJ 50S ribosomal protein L29 95 4e-18 Q0K627.1 RL29_CUPNH 50S ribosomal protein L29 95 4e-18 >D8IUS9.1 D8IUS9_HERSS 50S ribosomal subunit L29 protein Length = 64 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/64 (100%), Positives = 64/64 (100%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK Sbjct: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 Query: 61 DGQQ 64 DGQQ Sbjct: 61 DGQQ 64 >A6T3J6.1 RL29_JANMA 50S ribosomal protein L29 Length = 63 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/62 (82%), Positives = 56/62 (90%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASEL+GKD+A L KEL +LLKAQF LRMQIATQQLNNT+QLKKVRRDIARVKTV+N K Sbjct: 1 MKASELQGKDQAALTKELNDLLKAQFGLRMQIATQQLNNTSQLKKVRRDIARVKTVMNQK 60 Query: 61 DG 62 D Sbjct: 61 DA 62 >A4G9T0.1 RL29_HERAR 50S ribosomal protein L29 Length = 63 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/62 (82%), Positives = 56/62 (90%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASEL+GKD+A L KEL +LLKAQF LRMQIATQQLNNT+QLKKVRRDIARVKTV+N K Sbjct: 1 MKASELQGKDQAALTKELNDLLKAQFGLRMQIATQQLNNTSQLKKVRRDIARVKTVMNQK 60 Query: 61 DG 62 D Sbjct: 61 DA 62 >C3XCQ0.1 C3XCQ0_OXAFO 50S ribosomal protein L29 Length = 63 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/60 (85%), Positives = 55/60 (91%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASELR KD+A L+ EL +LLKAQF LRMQIATQQLNNTAQLKKVRRDIARVKTV+NSK Sbjct: 1 MKASELRSKDQAELKTELNDLLKAQFGLRMQIATQQLNNTAQLKKVRRDIARVKTVMNSK 60 >C3X6H9.1 C3X6H9_OXAFO 50S ribosomal protein L29 Length = 63 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/60 (80%), Positives = 54/60 (90%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASELR KD+A L+ EL +LLKAQF LRMQ+ATQQL NT+QLKKVRRDIARVKTV+NSK Sbjct: 1 MKASELRSKDQAELKTELNDLLKAQFGLRMQLATQQLTNTSQLKKVRRDIARVKTVMNSK 60 >F1VY54.1 F1VY54_9BURK LSU ribosomal protein L29p (L35e) Length = 63 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/62 (77%), Positives = 53/62 (85%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MK SEL+GKD+A L EL LLKAQF LRMQIATQQL+NT+QLKKVRRDIARVKTV+N K Sbjct: 1 MKTSELQGKDQAALTIELNALLKAQFGLRMQIATQQLSNTSQLKKVRRDIARVKTVMNVK 60 Query: 61 DG 62 D Sbjct: 61 DA 62 >Q1LI45.1 RL29_RALME 50S ribosomal protein L29 Length = 64 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/60 (80%), Positives = 53/60 (88%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASELRGKD AGL +EL ELLKAQFSLRMQ ATQQL NT+QLKKVR+DIARV+TV+ K Sbjct: 1 MKASELRGKDAAGLNQELSELLKAQFSLRMQKATQQLQNTSQLKKVRKDIARVQTVLTEK 60 >B3R7R5.1 RL29_CUPTR 50S ribosomal protein L29 Length = 64 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/60 (80%), Positives = 53/60 (88%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASELRGKD AGL +EL ELLKAQFSLRMQ ATQQL NT+QLKKVR+DIARV+TV+ K Sbjct: 1 MKASELRGKDAAGLNQELSELLKAQFSLRMQKATQQLQNTSQLKKVRKDIARVQTVLTEK 60 >Q46WF2.1 RL29_CUPPJ 50S ribosomal protein L29 Length = 64 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/60 (80%), Positives = 53/60 (88%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASELRGKD AGL +EL ELLKAQFSLRMQ ATQQL NT+QLKKVR+DIARV+TV+ K Sbjct: 1 MKASELRGKDAAGLNQELSELLKAQFSLRMQKATQQLQNTSQLKKVRKDIARVQTVLTEK 60 >Q0K627.1 RL29_CUPNH 50S ribosomal protein L29 Length = 64 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/60 (80%), Positives = 53/60 (88%) Query: 1 MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60 MKASELRGKD AGL +EL ELLKAQFSLRMQ ATQQL NT+QLKKVR+DIARV+TV+ K Sbjct: 1 MKASELRGKDAAGLNQELSELLKAQFSLRMQKATQQLQNTSQLKKVRKDIARVQTVLTQK 60