BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0341.p (104 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUT2.1 D8IUT2_HERSS 50S ribosomal protein L24 201 2e-50 A6T3J3.1 RL24_JANMA 50S ribosomal protein L24 174 4e-42 A4G9S7.1 RL24_HERAR 50S ribosomal protein L24 173 6e-42 F1VY51.1 F1VY51_9BURK LSU ribosomal protein L24p (L26e) 161 3e-38 C3X6I2.1 C3X6I2_OXAFO 50S ribosomal protein L24 157 5e-37 C3XCQ3.1 C3XCQ3_OXAFO 50S ribosomal protein L24 154 5e-36 C9YDW9.1 C9YDW9_9BURK 50S ribosomal protein L24 140 6e-32 E8UF70.1 E8UF70_TAYEM LSU ribosomal protein L24p (L26e) 138 3e-31 Q47J92.1 RL24_DECAR 50S ribosomal protein L24 137 6e-31 D4X584.1 D4X584_9BURK 50S ribosomal protein L24 137 7e-31 >D8IUT2.1 D8IUT2_HERSS 50S ribosomal protein L24 Length = 104 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK Sbjct: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVVKV 104 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVVKV Sbjct: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVVKV 104 >A6T3J3.1 RL24_JANMA 50S ribosomal protein L24 Length = 104 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 89/104 (85%), Positives = 95/104 (91%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M KIRK+DEVIVLTGKDKGKRGVV RV +YVVVEGVNVAKKAT+PNPMTGATGGIVDK Sbjct: 1 MDKIRKSDEVIVLTGKDKGKRGVVQRRVDANYVVVEGVNVAKKATKPNPMTGATGGIVDK 60 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVVKV 104 LMPIHVSNVALFNAATGKADR +K+VDGKKVR YKS+GE VKV Sbjct: 61 LMPIHVSNVALFNAATGKADRAGFKDVDGKKVRVYKSSGEAVKV 104 >A4G9S7.1 RL24_HERAR 50S ribosomal protein L24 Length = 104 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 88/104 (84%), Positives = 95/104 (91%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M KIRK+DEVIVLTGKDKGKRGVV RV +Y+VVEGVNVAKKAT+PNPMTGATGGIVDK Sbjct: 1 MDKIRKSDEVIVLTGKDKGKRGVVQRRVDANYLVVEGVNVAKKATKPNPMTGATGGIVDK 60 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVVKV 104 LMPIHVSNVALFNAATGKADR +K+VDGKKVR YKS+GE VKV Sbjct: 61 LMPIHVSNVALFNAATGKADRAGFKDVDGKKVRVYKSSGEAVKV 104 >F1VY51.1 F1VY51_9BURK LSU ribosomal protein L24p (L26e) Length = 104 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 80/104 (76%), Positives = 90/104 (86%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M KI+KNDEVIVL GKDKGKRG + RV D+V+V+G+NVAKKAT+PNPMTG TGGIVDK Sbjct: 1 MDKIKKNDEVIVLAGKDKGKRGTILKRVDADHVLVDGINVAKKATKPNPMTGTTGGIVDK 60 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVVKV 104 LMPIHVSNVALFNAATGKADRV +K VDG VR +KS+GE VKV Sbjct: 61 LMPIHVSNVALFNAATGKADRVGFKTVDGGLVRIFKSSGEAVKV 104 >C3X6I2.1 C3X6I2_OXAFO 50S ribosomal protein L24 Length = 104 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 83/102 (81%), Positives = 87/102 (85%), Gaps = 1/102 (0%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M KIRK DEVIVL GKDKGKRG V + D VVV GVNVAKK T+PNPMTGATGGIVDK Sbjct: 1 MNKIRKGDEVIVLVGKDKGKRGTVQ-QCMEDRVVVGGVNVAKKTTKPNPMTGATGGIVDK 59 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVV 102 LMPIHVSNVALFNA TGKADRV +KEVDGKKVR +KSNGEVV Sbjct: 60 LMPIHVSNVALFNAKTGKADRVGFKEVDGKKVRVFKSNGEVV 101 >C3XCQ3.1 C3XCQ3_OXAFO 50S ribosomal protein L24 Length = 104 Score = 154 bits (389), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 81/102 (79%), Positives = 86/102 (84%), Gaps = 1/102 (0%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M KIRK DEVIVL GKDKGKRG V + D VVV GVNVAKK T+PNPMTGATGGIVDK Sbjct: 1 MNKIRKGDEVIVLVGKDKGKRGAVQQCL-EDRVVVAGVNVAKKTTKPNPMTGATGGIVDK 59 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVV 102 LMPIHVSNVAL+N TGKADRV +KEVDGKKVR +KSNGEVV Sbjct: 60 LMPIHVSNVALYNEKTGKADRVGFKEVDGKKVRVFKSNGEVV 101 >C9YDW9.1 C9YDW9_9BURK 50S ribosomal protein L24 Length = 106 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 71/105 (67%), Positives = 85/105 (80%), Gaps = 1/105 (0%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M KIRK DEVIV+ G+DKGKRGV++ R +VVVEG+N+ KK T+PNPM G TGGIV+K Sbjct: 1 MNKIRKGDEVIVIAGRDKGKRGVISLRADDSHVVVEGINLVKKHTKPNPMKGTTGGIVEK 60 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEV-DGKKVRAYKSNGEVVKV 104 MPIH SNVA+FNAATGKADRV K + DGK+VR YKS+GE +KV Sbjct: 61 TMPIHQSNVAIFNAATGKADRVGIKVLADGKRVRVYKSSGEEIKV 105 >E8UF70.1 E8UF70_TAYEM LSU ribosomal protein L24p (L26e) Length = 106 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/104 (63%), Positives = 83/104 (79%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M KIRK DEVIV+ G+DK +RGVV RV D+V+VEG+NV KK TRPNPM GGIV K Sbjct: 1 MQKIRKGDEVIVIAGRDKNRRGVVLERVDADHVIVEGINVVKKHTRPNPMANNPGGIVSK 60 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVVKV 104 +PIH+SNV +FNAA+GKAD+V +K+ DG+KVR ++S+GEVV V Sbjct: 61 NLPIHISNVKIFNAASGKADKVVFKDEDGRKVRVFRSSGEVVGV 104 >Q47J92.1 RL24_DECAR 50S ribosomal protein L24 Length = 106 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 1/103 (0%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M KIRK DE++V+TGKDKGKRG V RV ++V+VEGVN AKK +PNP+ G GGIVDK Sbjct: 2 MEKIRKGDEIVVITGKDKGKRGTVLRRVDDEHVLVEGVNRAKKHVKPNPVKGVAGGIVDK 61 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEV-DGKKVRAYKSNGEVV 102 MPIH+SNVALFN AT KADRV +K + DG+KVR +KSNGE+V Sbjct: 62 DMPIHISNVALFNPATKKADRVGFKALDDGRKVRVFKSNGELV 104 >D4X584.1 D4X584_9BURK 50S ribosomal protein L24 Length = 106 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 68/102 (66%), Positives = 80/102 (78%) Query: 1 MAKIRKNDEVIVLTGKDKGKRGVVTARVGTDYVVVEGVNVAKKATRPNPMTGATGGIVDK 60 M IRK DEVIVLTG+DK +RG V ARV D+V+VEGVNVAKK + NPM GGIV+K Sbjct: 1 MNNIRKGDEVIVLTGRDKKRRGTVLARVDADHVLVEGVNVAKKHVKANPMANNPGGIVEK 60 Query: 61 LMPIHVSNVALFNAATGKADRVAYKEVDGKKVRAYKSNGEVV 102 MPIH+SNVALFN ATG+ DRV +EVDG+KVR ++SNG VV Sbjct: 61 TMPIHISNVALFNPATGRGDRVGVQEVDGRKVRVFRSNGAVV 102