BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0340.p (179 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUT3.1 D8IUT3_HERSS 50S ribosomal protein L5 363 5e-99 A6T3J2.1 RL5_JANMA 50S ribosomal protein L5 349 1e-94 A4G9S6.1 RL5_HERAR 50S ribosomal protein L5 347 5e-94 C3XCQ4.1 C3XCQ4_OXAFO 50S ribosomal protein L5 330 6e-89 Q7VTB9.1 RL5_BORPE 50S ribosomal protein L5 329 9e-89 Q7W2E3.1 RL5_BORPA 50S ribosomal protein L5 329 9e-89 Q7WRB1.1 RL5_BORBR 50S ribosomal protein L5 329 9e-89 D8N571.1 D8N571_RALSO 50S ribosomal protein L5 3 326 8e-88 C3X6I3.1 C3X6I3_OXAFO 50S ribosomal protein L5 326 9e-88 B9CH35.1 B9CH35_9BURK 50S ribosomal protein L5 325 1e-87 >D8IUT3.1 D8IUT3_HERSS 50S ribosomal protein L5 Length = 179 Score = 363 bits (933), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI Sbjct: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR Sbjct: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 >A6T3J2.1 RL5_JANMA 50S ribosomal protein L5 Length = 179 Score = 349 bits (895), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 170/179 (94%), Positives = 175/179 (97%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYK+KVV DLT K++YKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI Sbjct: 1 MARLQEFYKEKVVGDLTAKFAYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGA MYEFLDR ITVALPRVRDFRGVSG+ Sbjct: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGAHMYEFLDRFITVALPRVRDFRGVSGK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 >A4G9S6.1 RL5_HERAR 50S ribosomal protein L5 Length = 179 Score = 347 bits (889), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 167/179 (93%), Positives = 175/179 (97%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYK+KVV DLT K++YKS MEVPRILKITLNMGLSEA+ADKKIIEHAVGDLTKI Sbjct: 1 MARLQEFYKEKVVGDLTAKFAYKSAMEVPRILKITLNMGLSEAIADKKIIEHAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGA+MYEFLDR ITVALPRVRDFRG+SG+ Sbjct: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGAQMYEFLDRFITVALPRVRDFRGISGK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 >C3XCQ4.1 C3XCQ4_OXAFO 50S ribosomal protein L5 Length = 179 Score = 330 bits (845), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 154/179 (86%), Positives = 173/179 (96%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYK+KVVADL K+SYKS MEVPRI KITLNMGLSEAVADKK+I+HA GDL KI Sbjct: 1 MARLQEFYKEKVVADLMAKFSYKSAMEVPRITKITLNMGLSEAVADKKVIDHATGDLGKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARK+IAGFKIR+GYPIGCMVTLRGA+MYEFLDRL+T+ALPRVRDFRGV+GR Sbjct: 61 AGQKPVVTKARKSIAGFKIRDGYPIGCMVTLRGAKMYEFLDRLVTIALPRVRDFRGVNGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 +FDGRGNYN+G+KEQIIFPEIEY+KIDALRG+NISITTTAKTD+E+KALL+AFKFPFRN Sbjct: 121 SFDGRGNYNLGIKEQIIFPEIEYEKIDALRGLNISITTTAKTDEESKALLSAFKFPFRN 179 >Q7VTB9.1 RL5_BORPE 50S ribosomal protein L5 Length = 179 Score = 329 bits (844), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 157/179 (87%), Positives = 166/179 (92%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 M+RLQ+FYK KVVADL K+ YK VMEVPRI KITLNMG+SEAVADKK+IEHAV DLTKI Sbjct: 1 MSRLQEFYKSKVVADLQAKFGYKCVMEVPRITKITLNMGVSEAVADKKVIEHAVSDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKPVVTK RKAIAGFKIRE YPIGCMVTLRG RMYEFLDRL+ VALPRVRDFRG+SGR Sbjct: 61 SGQKPVVTKTRKAIAGFKIRENYPIGCMVTLRGQRMYEFLDRLVAVALPRVRDFRGISGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRG+NISITTTAKTDDEAKALL AF FPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTTAKTDDEAKALLTAFSFPFRN 179 >Q7W2E3.1 RL5_BORPA 50S ribosomal protein L5 Length = 179 Score = 329 bits (844), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 157/179 (87%), Positives = 166/179 (92%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 M+RLQ+FYK KVVADL K+ YK VMEVPRI KITLNMG+SEAVADKK+IEHAV DLTKI Sbjct: 1 MSRLQEFYKSKVVADLQAKFGYKCVMEVPRITKITLNMGVSEAVADKKVIEHAVSDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKPVVTK RKAIAGFKIRE YPIGCMVTLRG RMYEFLDRL+ VALPRVRDFRG+SGR Sbjct: 61 SGQKPVVTKTRKAIAGFKIRENYPIGCMVTLRGQRMYEFLDRLVAVALPRVRDFRGISGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRG+NISITTTAKTDDEAKALL AF FPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTTAKTDDEAKALLTAFSFPFRN 179 >Q7WRB1.1 RL5_BORBR 50S ribosomal protein L5 Length = 179 Score = 329 bits (844), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 157/179 (87%), Positives = 166/179 (92%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 M+RLQ+FYK KVVADL K+ YK VMEVPRI KITLNMG+SEAVADKK+IEHAV DLTKI Sbjct: 1 MSRLQEFYKSKVVADLQAKFGYKCVMEVPRITKITLNMGVSEAVADKKVIEHAVSDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKPVVTK RKAIAGFKIRE YPIGCMVTLRG RMYEFLDRL+ VALPRVRDFRG+SGR Sbjct: 61 SGQKPVVTKTRKAIAGFKIRENYPIGCMVTLRGQRMYEFLDRLVAVALPRVRDFRGISGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRG+NISITTTAKTDDEAKALL AF FPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTTAKTDDEAKALLTAFSFPFRN 179 >D8N571.1 D8N571_RALSO 50S ribosomal protein L5 3 Length = 190 Score = 326 bits (836), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 157/178 (88%), Positives = 168/178 (94%) Query: 2 ARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIA 61 ARLQ+FYK+KVVA+L ++ YKSVMEVPRI KITLNMGL EAV DKK+IEHA GDLTKIA Sbjct: 13 ARLQEFYKEKVVAELIKQFGYKSVMEVPRITKITLNMGLGEAVNDKKVIEHATGDLTKIA 72 Query: 62 GQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGRA 121 GQKPVVTKARKAIAGFKIR+GYPIG MVTLRG RMYEFLDR ITV+LPRVRDFRGVSGRA Sbjct: 73 GQKPVVTKARKAIAGFKIRQGYPIGTMVTLRGQRMYEFLDRFITVSLPRVRDFRGVSGRA 132 Query: 122 FDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 FDGRGNYNIGVKEQIIFPEIEYDKIDALRG+NISITTTAK+D+EAKALLAAFKFPFRN Sbjct: 133 FDGRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTTAKSDEEAKALLAAFKFPFRN 190 >C3X6I3.1 C3X6I3_OXAFO 50S ribosomal protein L5 Length = 179 Score = 326 bits (835), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 150/179 (83%), Positives = 170/179 (94%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+ YK+K+V DL K+SYKS MEVPRI KITLNMGLSEAVADKK+I+HA DL KI Sbjct: 1 MARLQELYKEKIVPDLMAKFSYKSAMEVPRITKITLNMGLSEAVADKKVIDHATSDLAKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARK+IAGFKIREGYPIGCMVTLRGARMYEFLDRL+T+ALPRVRDFRG++GR Sbjct: 61 AGQKPVVTKARKSIAGFKIREGYPIGCMVTLRGARMYEFLDRLVTIALPRVRDFRGINGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 +FDGRGNYN+G++EQIIFPE+EYDKIDALRG+NISITTTAKTD+E+KALL+AFKFPFRN Sbjct: 121 SFDGRGNYNLGIREQIIFPEVEYDKIDALRGLNISITTTAKTDEESKALLSAFKFPFRN 179 >B9CH35.1 B9CH35_9BURK 50S ribosomal protein L5 Length = 179 Score = 325 bits (834), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 160/179 (89%), Positives = 169/179 (94%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYK+KVV L K+ YKSVMEVPRI KITLNMGL EAVADKKIIE+AVGDLTKI Sbjct: 1 MARLQEFYKEKVVPGLIEKFGYKSVMEVPRITKITLNMGLGEAVADKKIIENAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIR+GYPIG MVTLRG MYEFLDRL+TVALPRVRDFRGVSGR Sbjct: 61 AGQKPVVTKARKAIAGFKIRQGYPIGAMVTLRGRAMYEFLDRLVTVALPRVRDFRGVSGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEI+YDKIDALRG+NISITTTAKTDDEAKALLA+FKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIDYDKIDALRGLNISITTTAKTDDEAKALLASFKFPFRN 179