BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0334.p         (62 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUT9.1 D8IUT9_HERSS 50S ribosomal protein L30                       117   8e-25
A6T3I6.1 RL30_JANMA 50S ribosomal protein L30                         107   6e-22
A4G9S0.1 RL30_HERAR 50S ribosomal protein L30                         107   6e-22
F1VYE0.1 F1VYE0_9BURK 50S ribosomal subunit protein L30               102   2e-20
B3R7F0.1 RL30_CUPTR 50S ribosomal protein L30                          99   2e-19
Q46WG2.1 RL30_CUPPJ 50S ribosomal protein L30                          99   2e-19
Q0K637.1 RL30_CUPNH 50S ribosomal protein L30                          99   2e-19
Q1LI55.1 RL30_RALME 50S ribosomal protein L30                          99   3e-19
D5W5N6.1 D5W5N6_BURSC 50S ribosomal protein L30                        99   3e-19
B5WTF6.1 B5WTF6_9BURK 50S ribosomal protein L30                        99   3e-19

>D8IUT9.1 D8IUT9_HERSS 50S ribosomal protein L30
          Length = 59

 Score =  117 bits (292), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 59/59 (100%), Positives = 59/59 (100%)

Query: 4  MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS
Sbjct: 1  MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 59


>A6T3I6.1 RL30_JANMA 50S ribosomal protein L30
          Length = 59

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 57/59 (96%)

Query: 4  MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          MANT+KVKLVKGLIGTR+ HRATVRGLGLR +NSVSELEDTP+VRGMINKVSYLVKVVS
Sbjct: 1  MANTVKVKLVKGLIGTRETHRATVRGLGLRGINSVSELEDTPAVRGMINKVSYLVKVVS 59


>A4G9S0.1 RL30_HERAR 50S ribosomal protein L30
          Length = 59

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 57/59 (96%)

Query: 4  MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          MANT+KVKLVKGLIGTR+ HRATVRGLGLR +NSVSELEDTP+VRGMINKVSYLVKVVS
Sbjct: 1  MANTVKVKLVKGLIGTRETHRATVRGLGLRGINSVSELEDTPAVRGMINKVSYLVKVVS 59


>F1VYE0.1 F1VYE0_9BURK 50S ribosomal subunit protein L30
          Length = 62

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 55/59 (93%)

Query: 4  MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          MA T+KV LVKGLIGTR+ HRATVRGLGLR +NSVSELEDTP+VRGMINKVSYLVKV+S
Sbjct: 4  MAKTVKVTLVKGLIGTRETHRATVRGLGLRGINSVSELEDTPAVRGMINKVSYLVKVIS 62


>B3R7F0.1 RL30_CUPTR 50S ribosomal protein L30
          Length = 60

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 55/56 (98%)

Query: 7  TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          T+KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV++
Sbjct: 5  TVKVQLVRSLIGTREDHRATVRGLGLRRINSVSELQDTPAVRGMINKVSYLVKVLA 60


>Q46WG2.1 RL30_CUPPJ 50S ribosomal protein L30
          Length = 60

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 55/56 (98%)

Query: 7  TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          T+KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV++
Sbjct: 5  TVKVQLVRSLIGTREDHRATVRGLGLRRINSVSELQDTPAVRGMINKVSYLVKVLA 60


>Q0K637.1 RL30_CUPNH 50S ribosomal protein L30
          Length = 60

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 55/56 (98%)

Query: 7  TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          T+KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV++
Sbjct: 5  TVKVQLVRSLIGTREDHRATVRGLGLRRINSVSELQDTPAVRGMINKVSYLVKVLA 60


>Q1LI55.1 RL30_RALME 50S ribosomal protein L30
          Length = 60

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 55/56 (98%)

Query: 7  TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          T+KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV++
Sbjct: 5  TVKVQLVRSLIGTREDHRATVRGLGLRRLNSVSELQDTPAVRGMINKVSYLVKVLA 60


>D5W5N6.1 D5W5N6_BURSC 50S ribosomal protein L30
          Length = 60

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/56 (83%), Positives = 54/56 (96%)

Query: 7  TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          T+KV+LVK LIGTR+ HRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV+S
Sbjct: 5  TVKVQLVKSLIGTRESHRATVRGLGLRRLNSVSELQDTPAVRGMINKVSYLVKVIS 60


>B5WTF6.1 B5WTF6_9BURK 50S ribosomal protein L30
          Length = 60

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/56 (83%), Positives = 54/56 (96%)

Query: 7  TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62
          T+KV+LVK LIGTR+ HRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV+S
Sbjct: 5  TVKVQLVKSLIGTRESHRATVRGLGLRRLNSVSELQDTPAVRGMINKVSYLVKVIS 60