BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0329.p (134 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUU5.1 D8IUU5_HERSS 30S ribosomal protein S11 269 1e-70 F1VZY2.1 F1VZY2_9BURK SSU ribosomal protein S11p (S14e) 245 1e-63 E1TBD0.1 E1TBD0_BURSG 30S ribosomal protein S11 242 1e-62 D5W5N0.1 D5W5N0_BURSC 30S ribosomal protein S11 242 1e-62 B2T727.1 B2T727_BURPP 30S ribosomal protein S11 242 1e-62 B2JI41.1 B2JI41_BURP8 30S ribosomal protein S11 242 1e-62 E8YH77.1 E8YH77_9BURK 30S ribosomal protein S11 242 1e-62 D5NSF1.1 D5NSF1_9BURK 30S ribosomal protein S11 242 1e-62 B5WTF1.1 B5WTF1_9BURK 30S ribosomal protein S11 242 1e-62 B1G8M9.1 B1G8M9_9BURK 30S ribosomal protein S11 242 1e-62 >D8IUU5.1 D8IUU5_HERSS 30S ribosomal protein S11 Length = 134 Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 134/134 (100%), Positives = 134/134 (100%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS Sbjct: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP Sbjct: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >F1VZY2.1 F1VZY2_9BURK SSU ribosomal protein S11p (S14e) Length = 134 Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 126/134 (94%), Positives = 134/134 (100%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+PNNAA++RVRKKVKKNVAEGIAH+HASFNNTIITITDRQGNALSWATSGGAGFKGS Sbjct: 1 MAKAPNNAASARVRKKVKKNVAEGIAHIHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAE+AGK+A+ECG+KNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP Sbjct: 61 RKSTPFAAQVAAEAAGKIAVECGVKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >E1TBD0.1 E1TBD0_BURSG 30S ribosomal protein S11 Length = 134 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/134 (88%), Positives = 126/134 (94%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+ NN+AA RVRKKVKKNVAEG+ HVHASFNNTIITITDRQGNAL+WATSGG GFKGS Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAG+VA+E G+KNLEVRIKGPGPGRESAVRAL+ LGIKIT I DVTP Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >D5W5N0.1 D5W5N0_BURSC 30S ribosomal protein S11 Length = 134 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/134 (88%), Positives = 126/134 (94%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+ NN+AA RVRKKVKKNVAEG+ HVHASFNNTIITITDRQGNAL+WATSGG GFKGS Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAG+VA+E G+KNLEVRIKGPGPGRESAVRAL+ LGIKIT I DVTP Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >B2T727.1 B2T727_BURPP 30S ribosomal protein S11 Length = 134 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/134 (88%), Positives = 126/134 (94%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+ NN+AA RVRKKVKKNVAEG+ HVHASFNNTIITITDRQGNAL+WATSGG GFKGS Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAG+VA+E G+KNLEVRIKGPGPGRESAVRAL+ LGIKIT I DVTP Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >B2JI41.1 B2JI41_BURP8 30S ribosomal protein S11 Length = 134 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/134 (88%), Positives = 126/134 (94%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+ NN+AA RVRKKVKKNVAEG+ HVHASFNNTIITITDRQGNAL+WATSGG GFKGS Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAG+VA+E G+KNLEVRIKGPGPGRESAVRAL+ LGIKIT I DVTP Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >E8YH77.1 E8YH77_9BURK 30S ribosomal protein S11 Length = 134 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/134 (88%), Positives = 126/134 (94%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+ NN+AA RVRKKVKKNVAEG+ HVHASFNNTIITITDRQGNAL+WATSGG GFKGS Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAG+VA+E G+KNLEVRIKGPGPGRESAVRAL+ LGIKIT I DVTP Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >D5NSF1.1 D5NSF1_9BURK 30S ribosomal protein S11 Length = 134 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/134 (88%), Positives = 126/134 (94%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+ NN+AA RVRKKVKKNVAEG+ HVHASFNNTIITITDRQGNAL+WATSGG GFKGS Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAG+VA+E G+KNLEVRIKGPGPGRESAVRAL+ LGIKIT I DVTP Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >B5WTF1.1 B5WTF1_9BURK 30S ribosomal protein S11 Length = 134 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/134 (88%), Positives = 126/134 (94%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+ NN+AA RVRKKVKKNVAEG+ HVHASFNNTIITITDRQGNAL+WATSGG GFKGS Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAG+VA+E G+KNLEVRIKGPGPGRESAVRAL+ LGIKIT I DVTP Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134 >B1G8M9.1 B1G8M9_9BURK 30S ribosomal protein S11 Length = 134 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 118/134 (88%), Positives = 126/134 (94%) Query: 1 MAKSPNNAAASRVRKKVKKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGAGFKGS 60 MAK+ NN+AA RVRKKVKKNVAEG+ HVHASFNNTIITITDRQGNAL+WATSGG GFKGS Sbjct: 1 MAKASNNSAAQRVRKKVKKNVAEGVVHVHASFNNTIITITDRQGNALAWATSGGQGFKGS 60 Query: 61 RKSTPFAAQVAAESAGKVAIECGIKNLEVRIKGPGPGRESAVRALNNLGIKITQIQDVTP 120 RKSTPFAAQVAAESAG+VA+E G+KNLEVRIKGPGPGRESAVRAL+ LGIKIT I DVTP Sbjct: 61 RKSTPFAAQVAAESAGRVAMEYGVKNLEVRIKGPGPGRESAVRALHGLGIKITAISDVTP 120 Query: 121 VPHNGCRPPKRRRI 134 VPHNGCRPPKRRRI Sbjct: 121 VPHNGCRPPKRRRI 134