BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0314.p (212 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUW0.1 D8IUW0_HERSS Cytochrome c553 protein 436 e-120 A6T3G9.1 A6T3G9_JANMA Cytochrome c, class I 310 6e-83 F1VZH5.1 F1VZH5_9BURK Cytochrome c4 298 3e-79 A4G9Q6.1 A4G9Q6_HERAR Cytochrome c4 297 7e-79 Q46WH6.1 Q46WH6_CUPPJ Cytochrome c, class I 249 2e-64 Q1LI70.1 Q1LI70_RALME Cytochrome c4 244 8e-63 B2UEI7.1 B2UEI7_RALPJ Cytochrome c class I 233 1e-59 B1XST3.1 B1XST3_POLNS Cytochrome c class I 232 2e-59 A4SUZ3.1 A4SUZ3_POLSQ Cytochrome c553-like protein 231 7e-59 A6GPJ1.1 A6GPJ1_9BURK Cytochrome c, class I 230 1e-58 >D8IUW0.1 D8IUW0_HERSS Cytochrome c553 protein Length = 220 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 212/212 (100%), Positives = 212/212 (100%) Query: 1 LYSVFAAFLAVASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCHGAAGNSTI 60 LYSVFAAFLAVASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCHGAAGNSTI Sbjct: 9 LYSVFAAFLAVASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCHGAAGNSTI 68 Query: 61 TQNPKLAGQHEAYIAKQLLNFRTPDRNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAA 120 TQNPKLAGQHEAYIAKQLLNFRTPDRNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAA Sbjct: 69 TQNPKLAGQHEAYIAKQLLNFRTPDRNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAA 128 Query: 121 KNKDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRG 180 KNKDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRG Sbjct: 129 KNKDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRG 188 Query: 181 GARTNSVQMTTISERLSDKEIKAVADYIAGLK 212 GARTNSVQMTTISERLSDKEIKAVADYIAGLK Sbjct: 189 GARTNSVQMTTISERLSDKEIKAVADYIAGLK 220 >A6T3G9.1 A6T3G9_JANMA Cytochrome c, class I Length = 219 Score = 310 bits (795), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 143/210 (68%), Positives = 176/210 (83%), Gaps = 1/210 (0%) Query: 3 SVFAAFLAVASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCHGAAGNSTITQ 62 S+F A LA+ASTA+A++DKK VKADPAKGEALY GD+ RN+ AC++CHGAAGNS+I + Sbjct: 11 SLFVALLAIASTANASEDKKV-VKADPAKGEALYNTGDATRNVTACIACHGAAGNSSIAE 69 Query: 63 NPKLAGQHEAYIAKQLLNFRTPDRNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAAKN 122 NPKL GQH AYI KQL++F+ P RNN +M+P+AK +++EDI NV A+LA Q P PGAAKN Sbjct: 70 NPKLTGQHGAYIHKQLVDFKGPARNNAIMAPIAKGMTEEDIQNVIAYLAKQKPSPGAAKN 129 Query: 123 KDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRGGA 182 KDT++LGK I+R GIA KNVPACA CHS NGAG+PAQYPRLAGQHQ YT AQL NFR G Sbjct: 130 KDTVELGKKIYRGGIAEKNVPACAACHSANGAGLPAQYPRLAGQHQTYTAAQLINFRNGT 189 Query: 183 RTNSVQMTTISERLSDKEIKAVADYIAGLK 212 R NS MTT+++R+SD+EI+AV+DY+AGLK Sbjct: 190 RKNSEPMTTVAKRMSDEEIQAVSDYVAGLK 219 >F1VZH5.1 F1VZH5_9BURK Cytochrome c4 Length = 219 Score = 298 bits (764), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 142/210 (67%), Positives = 172/210 (81%), Gaps = 1/210 (0%) Query: 3 SVFAAFLAVASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCHGAAGNSTITQ 62 S A LA++S A+AA++KK KAD AKGEA+YTNGD RNI ACV+CHGAAGNSTI Q Sbjct: 11 SFCIAVLALSSIAYAAEEKKV-FKADVAKGEAIYTNGDPTRNIPACVACHGAAGNSTIVQ 69 Query: 63 NPKLAGQHEAYIAKQLLNFRTPDRNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAAKN 122 NPKLAGQH+AY+ KQL+NF+ PDRNN +MS AKAL+++++ N++A+L AQ KPGAAKN Sbjct: 70 NPKLAGQHDAYLYKQLMNFKGPDRNNAIMSMTAKALTEDEMKNISAYLGAQVVKPGAAKN 129 Query: 123 KDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRGGA 182 KDTI+ GK+I+R GI KNVPACA CH PNGAGIP Q+ RL QHQ+YTVAQL +FR G Sbjct: 130 KDTIEAGKNIYRGGIGEKNVPACASCHGPNGAGIPDQFARLGAQHQEYTVAQLMSFRAGT 189 Query: 183 RTNSVQMTTISERLSDKEIKAVADYIAGLK 212 R NS QMTTI++RLSD E++AVADYIAGLK Sbjct: 190 RKNSTQMTTIAKRLSDDEMQAVADYIAGLK 219 >A4G9Q6.1 A4G9Q6_HERAR Cytochrome c4 Length = 221 Score = 297 bits (760), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 138/212 (65%), Positives = 175/212 (82%), Gaps = 3/212 (1%) Query: 3 SVFAAFLAVASTAHAADDKKA--PVKADPAKGEALYTNGDSARNIVACVSCHGAAGNSTI 60 S+F AFL +AS AHA+++KKA VKADPAKGEALY GD++RN++AC++CHGAAGNS+I Sbjct: 11 SLFVAFLTLASIAHASEEKKAVKAVKADPAKGEALYNTGDASRNVIACIACHGAAGNSSI 70 Query: 61 TQNPKLAGQHEAYIAKQLLNFRTPDRNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAA 120 +NPKL+GQH AYI KQLL+F++ RNN +M P+AK +++EDI N+ A++ P PGAA Sbjct: 71 AENPKLSGQHGAYIHKQLLDFKSGARNNAIMGPIAKGMTEEDIRNLIAYMDKSKPTPGAA 130 Query: 121 KNKDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRG 180 +NKDT++LGKHI+R GIA K+VPACA CHS NGAG+PAQ+PRLAGQHQ YT AQL FR Sbjct: 131 RNKDTVELGKHIFRGGIAEKSVPACAACHSANGAGLPAQFPRLAGQHQTYTEAQLIAFRT 190 Query: 181 GARTNSVQMTTISERLSDKEIKAVADYIAGLK 212 GAR N QM+ I +R+SD+EIKAVADY+AGLK Sbjct: 191 GAREND-QMSKIVKRMSDEEIKAVADYVAGLK 221 >Q46WH6.1 Q46WH6_CUPPJ Cytochrome c, class I Length = 219 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 123/212 (58%), Positives = 151/212 (71%) Query: 1 LYSVFAAFLAVASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCHGAAGNSTI 60 L + A A A T A+ ++A KADPAKGE LYT G RN+ AC+SCHGA GNS Sbjct: 8 LGVLVLALPATAMTGLASASEQAAAKADPAKGETLYTQGAPDRNVPACLSCHGANGNSGA 67 Query: 61 TQNPKLAGQHEAYIAKQLLNFRTPDRNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAA 120 NPKLA QH Y+ KQL NF+ RNN +MSP+A AL+D+++ ++ A+LA Q KP A Sbjct: 68 AANPKLAAQHPEYVHKQLANFKDKSRNNAIMSPLAGALNDQEMKDIGAYLAKQPIKPATA 127 Query: 121 KNKDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRG 180 KNKDTI+ G+ I+RAGIAAK VPACA CH P GAGIPAQYPR+ GQ DYT AQL FR Sbjct: 128 KNKDTIEAGQKIYRAGIAAKGVPACAACHGPTGAGIPAQYPRIGGQWSDYTEAQLVAFRQ 187 Query: 181 GARTNSVQMTTISERLSDKEIKAVADYIAGLK 212 G R N+ MTTI+ ++SD EIKAVADY+AG++ Sbjct: 188 GTRKNNPVMTTIAAKMSDAEIKAVADYVAGVR 219 >Q1LI70.1 Q1LI70_RALME Cytochrome c4 Length = 219 Score = 244 bits (622), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 111/185 (60%), Positives = 141/185 (76%) Query: 28 DPAKGEALYTNGDSARNIVACVSCHGAAGNSTITQNPKLAGQHEAYIAKQLLNFRTPDRN 87 DPAKGE LY+ G RN+ AC+SCHGAAGNS NPKLAGQ Y+ KQL +F+ RN Sbjct: 35 DPAKGETLYSQGAPDRNVPACLSCHGAAGNSAAATNPKLAGQQAEYVHKQLADFKAKSRN 94 Query: 88 NPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAAKNKDTIDLGKHIWRAGIAAKNVPACAG 147 N +M+P A AL+D+++ ++ A+LA Q KP AKNKDTI++G+ I+R GIAAK VPACAG Sbjct: 95 NAIMTPYASALNDQEMKDIGAYLAKQQVKPATAKNKDTIEVGQKIYRGGIAAKGVPACAG 154 Query: 148 CHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRGGARTNSVQMTTISERLSDKEIKAVADY 207 CH P GAGIPAQYPR+ GQ+ +YT AQL FR G RTN+ M+TI+ ++SD EIKAVADY Sbjct: 155 CHGPTGAGIPAQYPRIGGQYSEYTEAQLVAFRQGTRTNNSVMSTIAAQMSDTEIKAVADY 214 Query: 208 IAGLK 212 +AG++ Sbjct: 215 VAGVR 219 >B2UEI7.1 B2UEI7_RALPJ Cytochrome c class I Length = 219 Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 120/215 (55%), Positives = 155/215 (72%), Gaps = 5/215 (2%) Query: 1 LYSVFAAFLA-VASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCHGAAGNST 59 +++V A LA V S AHA + K A KAD A+GE ++ NG A + AC SCHGA GNS Sbjct: 7 VFAVAALSLASVFSMAHAEEQKVA--KADAARGETIFNNGVPANGVPACTSCHGAGGNSA 64 Query: 60 ITQNPKLAGQHEAYIAKQLLNFRTP-DRNNPVMSPMAKALSDEDIHNVAAFLAAQ-APKP 117 + NPKLAGQH Y+ KQL +F+ DRNNPVMS A ALSD+D+ ++ A+L Q A KP Sbjct: 65 MNVNPKLAGQHAEYVEKQLKDFKAKTDRNNPVMSLYASALSDQDMKDIGAYLGKQPAWKP 124 Query: 118 GAAKNKDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTN 177 G+AK+KDTI+LG+ ++R G A + + ACAGCH P GAGIPAQYPR+AGQ +YT AQL Sbjct: 125 GSAKSKDTIELGQKLYRGGDAKRGIAACAGCHGPTGAGIPAQYPRIAGQFSEYTEAQLVA 184 Query: 178 FRGGARTNSVQMTTISERLSDKEIKAVADYIAGLK 212 F+ G R NSVQM ++ R++ ++IKAVADYIAGL+ Sbjct: 185 FQSGTRKNSVQMHDLAGRMTAQQIKAVADYIAGLR 219 >B1XST3.1 B1XST3_POLNS Cytochrome c class I Length = 238 Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 109/186 (58%), Positives = 136/186 (73%) Query: 26 KADPAKGEALYTNGDSARNIVACVSCHGAAGNSTITQNPKLAGQHEAYIAKQLLNFRTPD 85 K D A GEALY+NGD+ R + AC++CHG G S + PKL+ QH AY AKQL NF+ Sbjct: 52 KVDVAAGEALYSNGDATRGVTACLTCHGPKGQSAVGTWPKLSAQHAAYTAKQLKNFKEGT 111 Query: 86 RNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAAKNKDTIDLGKHIWRAGIAAKNVPAC 145 R NPVM MA L+++D+ N+AA+L Q G A++K++I+LG+ I+R GIAAK VPAC Sbjct: 112 RANPVMMGMAATLTEQDMQNIAAYLVKQPLSQGVAQDKNSIELGQSIYRGGIAAKGVPAC 171 Query: 146 AGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRGGARTNSVQMTTISERLSDKEIKAVA 205 A CHSP GAGIP+QYP L GQ DYT AQL FR G R NS QMTTI+ +LSD+E+KAV+ Sbjct: 172 AACHSPTGAGIPSQYPLLGGQWADYTNAQLLAFREGVRKNSSQMTTIATKLSDQEMKAVS 231 Query: 206 DYIAGL 211 DYIAGL Sbjct: 232 DYIAGL 237 >A4SUZ3.1 A4SUZ3_POLSQ Cytochrome c553-like protein Length = 246 Score = 231 bits (588), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 107/186 (57%), Positives = 134/186 (72%) Query: 26 KADPAKGEALYTNGDSARNIVACVSCHGAAGNSTITQNPKLAGQHEAYIAKQLLNFRTPD 85 KADPA GEALY+ GD+ R + AC++CHG G S + PKL+ QH AYI KQL NF+ Sbjct: 60 KADPAAGEALYSAGDATRGVTACITCHGPKGQSAVGTWPKLSAQHAAYITKQLKNFKEGT 119 Query: 86 RNNPVMSPMAKALSDEDIHNVAAFLAAQAPKPGAAKNKDTIDLGKHIWRAGIAAKNVPAC 145 R N VM MA L+++D+ N+++FL Q G A+NKDTI+LG+ I+R GIA+K VPAC Sbjct: 120 RANAVMMGMAATLTEQDMINISSFLVKQPASQGVAQNKDTIELGQSIYRGGIASKAVPAC 179 Query: 146 AGCHSPNGAGIPAQYPRLAGQHQDYTVAQLTNFRGGARTNSVQMTTISERLSDKEIKAVA 205 A CHSPNGAG+P+QYPRL GQ DYT AQL F G R N MTTI+ ++SD E+KAV+ Sbjct: 180 AACHSPNGAGLPSQYPRLGGQWADYTYAQLVAFSNGTRKNGPMMTTIAGKMSDAEMKAVS 239 Query: 206 DYIAGL 211 DYIAGL Sbjct: 240 DYIAGL 245 >A6GPJ1.1 A6GPJ1_9BURK Cytochrome c, class I Length = 249 Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 119/218 (54%), Positives = 150/218 (68%), Gaps = 16/218 (7%) Query: 1 LYSVFAAFLAVASTAHAADDKKAPVKADPAKGEALYTNGDSARNIVACVSCHGAAGNSTI 60 L S+FAA + S A AA + K D AKG+ + CV+CHGA GNS+ Sbjct: 42 LSSLFAALMFSMSVAQAAGPVEV-FKPDLAKGKEIMQQ---------CVACHGADGNSSA 91 Query: 61 TQNPKLAGQHEAYIAKQLLNFR------TPDRNNPVMSPMAKALSDEDIHNVAAFLAAQA 114 + PK+AGQH Y+ KQL+NF+ P R+N +M+ A ALSDED+ NV+A+LAAQ Sbjct: 92 SIYPKIAGQHAEYLYKQLVNFKPGKDGEKPLRDNAIMAGFAAALSDEDMKNVSAYLAAQK 151 Query: 115 PKPGAAKNKDTIDLGKHIWRAGIAAKNVPACAGCHSPNGAGIPAQYPRLAGQHQDYTVAQ 174 G+AKNKDT+ LG+ I+R GIA K +PACAGCHSPNGAGIPAQYPRL GQH +YT +Q Sbjct: 152 QTLGSAKNKDTLALGEKIYRGGIADKKIPACAGCHSPNGAGIPAQYPRLGGQHAEYTESQ 211 Query: 175 LTNFRGGARTNSVQMTTISERLSDKEIKAVADYIAGLK 212 L FR G R NS QMT I+ ++SDKE+KAV+DYIAGL+ Sbjct: 212 LVAFRDGVRNNSEQMTVIANKMSDKEMKAVSDYIAGLR 249