BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0274.p (155 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUZ5.1 D8IUZ5_HERSS General secretion pathway protein 314 2e-84 D8NWE9.1 D8NWE9_RALSO General Secretory Pathway protein G, type ... 122 1e-26 Q1LHX0.1 Q1LHX0_RALME Pseudopilin, cryptic, general secretion pa... 121 3e-26 B2UFE3.1 B2UFE3_RALPJ General secretion pathway protein G 119 1e-25 E2SXR1.1 E2SXR1_9RALS General secretion pathway protein G 119 1e-25 C6BGG3.1 C6BGG3_RALP1 General secretion pathway protein G 119 1e-25 Q46WA2.1 Q46WA2_CUPPJ General secretion pathway protein G 119 2e-25 F1VU06.1 F1VU06_9BURK General secretion pathway protein G 118 3e-25 B9CIX2.1 B9CIX2_9BURK General secretion pathway protein G 117 6e-25 B9BZC0.1 B9BZC0_9BURK General secretion pathway protein G 117 6e-25 >D8IUZ5.1 D8IUZ5_HERSS General secretion pathway protein Length = 183 Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 155/155 (100%), Positives = 155/155 (100%) Query: 1 MRRSLQPSRRHPAFLFLQRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAE 60 MRRSLQPSRRHPAFLFLQRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAE Sbjct: 29 MRRSLQPSRRHPAFLFLQRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAE 88 Query: 61 KDMKAIAAGLERYRQDNGRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNP 120 KDMKAIAAGLERYRQDNGRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNP Sbjct: 89 KDMKAIAAGLERYRQDNGRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNP 148 Query: 121 YQYQADDDGASYELFSFGQAGPEGGDDDDRVISLH 155 YQYQADDDGASYELFSFGQAGPEGGDDDDRVISLH Sbjct: 149 YQYQADDDGASYELFSFGQAGPEGGDDDDRVISLH 183 >D8NWE9.1 D8NWE9_RALSO General Secretory Pathway protein G, type II secretion system Length = 156 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/150 (42%), Positives = 96/150 (64%), Gaps = 4/150 (2%) Query: 1 MRRSLQPSRRHPAFLF-LQRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAA 59 M+ L+ S R AF + RG + ++V+ +L + AAL+VP +++R + + AA Sbjct: 2 MQGQLRTSVRQRAFARRVARGFTLIEIMVVVVILGILAALVVPKIMSRPDE---ARIIAA 58 Query: 60 EKDMKAIAAGLERYRQDNGRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGN 119 ++D+ +I+ L+ YR DNGRYP+T+QGL ALV +P EP+ N W+ GGY+ERLP+DPWG+ Sbjct: 59 KQDIASISQALKLYRLDNGRYPTTEQGLAALVTKPTTEPVPNNWKGGGYLERLPKDPWGH 118 Query: 120 PYQYQADDDGASYELFSFGQAGPEGGDDDD 149 PYQY ++FSFG G GG +D Sbjct: 119 PYQYLNPGVRGEVDIFSFGADGQPGGTGND 148 >Q1LHX0.1 Q1LHX0_RALME Pseudopilin, cryptic, general secretion pathway Length = 154 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/150 (42%), Positives = 94/150 (62%), Gaps = 4/150 (2%) Query: 1 MRR-SLQPSRRHPAFLFLQRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAA 59 MRR + QP R P+ RG + ++V+ +L V AAL+VP +++R + + AA Sbjct: 1 MRRFASQPDTRLPSQRRRARGFTLIEIMVVIVILGVLAALVVPKIMSRPDE---ARIVAA 57 Query: 60 EKDMKAIAAGLERYRQDNGRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGN 119 +D+ ++ L+ YR DNGRYP+T+QGL ALV +P EP+ N W+ GGY+E+LP+DPWG+ Sbjct: 58 RQDISSVMQALKLYRLDNGRYPTTEQGLAALVTKPTIEPVPNNWKGGGYLEKLPKDPWGH 117 Query: 120 PYQYQADDDGASYELFSFGQAGPEGGDDDD 149 PYQY ++FSFG G GG +D Sbjct: 118 PYQYLNPGVRGEIDVFSFGADGQPGGTGND 147 >B2UFE3.1 B2UFE3_RALPJ General secretion pathway protein G Length = 156 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 3/131 (2%) Query: 19 RGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAEKDMKAIAAGLERYRQDNG 78 RG + ++V+ +L + AAL+VP +++R + + AA++D+ +I+ L+ YR DNG Sbjct: 21 RGFTLIEIMVVVVILGILAALVVPKIMSRPDE---ARIIAAKQDIASISQALKLYRLDNG 77 Query: 79 RYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNPYQYQADDDGASYELFSFG 138 RYP+T+QG+ ALV +P EP+ N W+ GGY+ERLP+DPWG+PYQY ++FSFG Sbjct: 78 RYPTTEQGISALVTKPTTEPIPNNWKGGGYLERLPKDPWGHPYQYLNPGVRGEVDVFSFG 137 Query: 139 QAGPEGGDDDD 149 G GG +D Sbjct: 138 ADGQAGGTGND 148 >E2SXR1.1 E2SXR1_9RALS General secretion pathway protein G Length = 156 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 3/131 (2%) Query: 19 RGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAEKDMKAIAAGLERYRQDNG 78 RG + ++V+ +L + AAL+VP +++R + + AA++D+ +I+ L+ YR DNG Sbjct: 21 RGFTLIEIMVVVVILGILAALVVPKIMSRPDE---ARIIAAKQDIASISQALKLYRLDNG 77 Query: 79 RYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNPYQYQADDDGASYELFSFG 138 RYP+T+QG+ ALV +P EP+ N W+ GGY+ERLP+DPWG+PYQY ++FSFG Sbjct: 78 RYPTTEQGISALVTKPTTEPIPNNWKGGGYLERLPKDPWGHPYQYLNPGVRGEVDVFSFG 137 Query: 139 QAGPEGGDDDD 149 G GG +D Sbjct: 138 ADGQAGGTGND 148 >C6BGG3.1 C6BGG3_RALP1 General secretion pathway protein G Length = 159 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 3/131 (2%) Query: 19 RGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAEKDMKAIAAGLERYRQDNG 78 RG + ++V+ +L + AAL+VP +++R + + AA++D+ +I+ L+ YR DNG Sbjct: 24 RGFTLIEIMVVVVILGILAALVVPKIMSRPDE---ARIIAAKQDIASISQALKLYRLDNG 80 Query: 79 RYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNPYQYQADDDGASYELFSFG 138 RYP+T+QG+ ALV +P EP+ N W+ GGY+ERLP+DPWG+PYQY ++FSFG Sbjct: 81 RYPTTEQGISALVTKPTTEPIPNNWKGGGYLERLPKDPWGHPYQYLNPGVRGEVDVFSFG 140 Query: 139 QAGPEGGDDDD 149 G GG +D Sbjct: 141 ADGQAGGTGND 151 >Q46WA2.1 Q46WA2_CUPPJ General secretion pathway protein G Length = 163 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/132 (43%), Positives = 85/132 (64%), Gaps = 3/132 (2%) Query: 18 QRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAEKDMKAIAAGLERYRQDN 77 RG + ++V+ +L V AAL+VP +++R + + AA +D+ +I L+ YR DN Sbjct: 28 SRGFTLIEIMVVIVILGVLAALVVPKIMSRPDE---ARIVAARQDISSIMQALKLYRLDN 84 Query: 78 GRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNPYQYQADDDGASYELFSF 137 RYP+T+QGL ALV +P EP+ N W+ GGY+E+LP+DPWG+PYQY ++FSF Sbjct: 85 SRYPTTEQGLAALVAKPTTEPVPNNWKAGGYLEKLPKDPWGHPYQYLNPGVRGEIDIFSF 144 Query: 138 GQAGPEGGDDDD 149 G G GG+ +D Sbjct: 145 GADGQAGGNGND 156 >F1VU06.1 F1VU06_9BURK General secretion pathway protein G Length = 154 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 3/149 (2%) Query: 1 MRRSLQPSRRHPAFLFLQRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAE 60 M S R + RG + ++V+ ++ + AAL+VP L+ R + + AA Sbjct: 1 MTTVFHVSGRRTLRAAVARGFTLIEIMVVVVIMGILAALVVPKLMGRTDD---ARVTAAR 57 Query: 61 KDMKAIAAGLERYRQDNGRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNP 120 +D+ + L+ Y+ DN RYP+T+QGL ALVI+P P A GW+ GGY+++LP+DPWGNP Sbjct: 58 QDIATVMQALKLYKLDNQRYPTTEQGLSALVIKPTSGPDARGWKTGGYIDKLPKDPWGNP 117 Query: 121 YQYQADDDGASYELFSFGQAGPEGGDDDD 149 YQY + ++FSFG G GG +D Sbjct: 118 YQYLSPGIKGEVDVFSFGADGQSGGTGND 146 >B9CIX2.1 B9CIX2_9BURK General secretion pathway protein G Length = 139 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 87/135 (64%), Gaps = 3/135 (2%) Query: 18 QRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAEKDMKAIAAGLERYRQDN 77 QRG + ++V+ +L + AAL+VP +++R + + AA++D+ I L+ YR DN Sbjct: 4 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDE---ARRIAAKQDIGTIMQALKLYRLDN 60 Query: 78 GRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNPYQYQADDDGASYELFSF 137 GRYP+ +QGL AL+ +P +P+ N W+ GGY+ERLP DPWGNPY+Y ++FS+ Sbjct: 61 GRYPTQEQGLNALIQKPSTDPIPNNWKDGGYLERLPNDPWGNPYKYLNPGVHGEIDVFSY 120 Query: 138 GQAGPEGGDDDDRVI 152 G G EGGD +D I Sbjct: 121 GADGKEGGDANDTDI 135 >B9BZC0.1 B9BZC0_9BURK General secretion pathway protein G Length = 139 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 87/135 (64%), Gaps = 3/135 (2%) Query: 18 QRGLARLRWILVLTVLAVGAALLVPPLVTRFNHDHSPQAQAAEKDMKAIAAGLERYRQDN 77 QRG + ++V+ +L + AAL+VP +++R + + AA++D+ I L+ YR DN Sbjct: 4 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDE---ARRIAAKQDIGTIMQALKLYRLDN 60 Query: 78 GRYPSTQQGLLALVIRPVREPLANGWQLGGYVERLPRDPWGNPYQYQADDDGASYELFSF 137 GRYP+ +QGL AL+ +P +P+ N W+ GGY+ERLP DPWGNPY+Y ++FS+ Sbjct: 61 GRYPTQEQGLNALIQKPSTDPIPNNWKDGGYLERLPNDPWGNPYKYLNPGVHGEIDVFSY 120 Query: 138 GQAGPEGGDDDDRVI 152 G G EGGD +D I Sbjct: 121 GADGKEGGDANDTDI 135