BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0249.p         (60 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IV53.1 D8IV53_HERSS TPR repeat containing, SEL1 subfamily, pro...   127   6e-28
D8IV55.1 D8IV55_HERSS TPR repeat containing, SEL1 subfamily, pro...   112   2e-23

>D8IV53.1 D8IV53_HERSS TPR repeat containing, SEL1 subfamily, protein
          Length = 517

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%)

Query: 1   LWTRQAYVEEGQSFPDPRERGLEISPKDIQWQWLDQANLPLPSGRKDIIIRNFSPAVSTN 60
           LWTRQAYVEEGQSFPDPRERGLEISPKDIQWQWLDQANLPLPSGRKDIIIRNFSPAVSTN
Sbjct: 458 LWTRQAYVEEGQSFPDPRERGLEISPKDIQWQWLDQANLPLPSGRKDIIIRNFSPAVSTN 517


>D8IV55.1 D8IV55_HERSS TPR repeat containing, SEL1 subfamily, protein
          Length = 518

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/56 (92%), Positives = 53/56 (94%)

Query: 1   LWTRQAYVEEGQSFPDPRERGLEISPKDIQWQWLDQANLPLPSGRKDIIIRNFSPA 56
           LWTRQAYVEEGQSFPDPRERGL+ISPKDIQWQWLDQAN PLPSGRKDI IRNF PA
Sbjct: 456 LWTRQAYVEEGQSFPDPRERGLDISPKDIQWQWLDQANQPLPSGRKDITIRNFDPA 511