BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0228.p (170 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IVZ4.1 D8IVZ4_HERSS Transcription regulator protein 241 3e-62 B5WRR0.1 B5WRR0_9BURK Transcriptional regulator, TetR family 100 5e-20 D5W8M5.1 D5W8M5_BURSC Transcriptional regulator, TetR family 100 5e-20 D5NIE3.1 D5NIE3_9BURK Transcriptional regulator, TetR family 99 2e-19 Q13Y42.1 Q13Y42_BURXL Transcriptional regulator, TetR family 99 2e-19 B1G746.1 B1G746_9BURK Transcriptional regulator, TetR family 98 4e-19 E8YM37.1 E8YM37_9BURK Regulatory protein TetR 95 4e-18 E1T9W4.1 E1T9W4_BURSG Regulatory protein TetR 95 4e-18 B2T529.1 B2T529_BURPP Transcriptional regulator, TetR family 92 3e-17 B9C6P3.1 B9C6P3_9BURK Transcriptional regulator, TetR family 89 2e-16 >D8IVZ4.1 D8IVZ4_HERSS Transcription regulator protein Length = 221 Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 114/114 (100%), Positives = 114/114 (100%) Query: 1 MTDAAVLEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFV 60 MTDAAVLEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFV Sbjct: 85 MTDAAVLEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFV 144 Query: 61 EAYGQLTGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFLK 114 EAYGQLTGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFLK Sbjct: 145 EAYGQLTGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFLK 198 >B5WRR0.1 B5WRR0_9BURK Transcriptional regulator, TetR family Length = 178 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 70/107 (65%) Query: 7 LEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQL 66 +E + YS L+R++KC LLW+EA+++A+RD +FR + + F+ E+ Q++ +V + + Sbjct: 63 MEARVLRYYSSLHRENKCFLLWVEAKLLAVRDGRFRVRFNAFMHEKIEQLSAYVREFSER 122 Query: 67 TGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFL 113 GT + PP ++AIGLM LC+GV F Y P V + AE+VL+ F Sbjct: 123 VGTPMQVPPEQLAIGLMGLCDGVQFFYTVDPQNVPTEMAEAVLAGFF 169 >D5W8M5.1 D5W8M5_BURSC Transcriptional regulator, TetR family Length = 205 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 43/99 (43%), Positives = 67/99 (67%) Query: 15 YSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQLTGTTLSAP 74 YS L+R++KC LLW+EA+++A+RD +FR + + F+ E+ Q++ +V + + GT +S P Sbjct: 98 YSSLHRENKCFLLWVEAKLLAVRDGRFRLRFNAFMHEKIEQLSAYVREFSERVGTPMSMP 157 Query: 75 PREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFL 113 P ++AIGLM LC+GV F Y P V + AE VL+ F Sbjct: 158 PEQLAIGLMGLCDGVQFFYTVDPQNVPTEMAEMVLAGFF 196 >D5NIE3.1 D5NIE3_9BURK Transcriptional regulator, TetR family Length = 205 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 68/107 (63%) Query: 7 LEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQL 66 +E+ + YS L+R++KC LLW+EA+++A+RD +FR + + F+ E+ Q++ ++ + Sbjct: 90 MEERVLRYYSNLHRENKCFLLWVEAKLLAVRDGRFRMRFNAFMHEKLEQLSAYIREFSAR 149 Query: 67 TGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFL 113 GT + PP +AIGLM LC+GV F Y P V + AE VL+ F Sbjct: 150 VGTPMPMPPETLAIGLMGLCDGVQFFYTVDPQNVPAEMAEKVLAGFF 196 >Q13Y42.1 Q13Y42_BURXL Transcriptional regulator, TetR family Length = 205 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 68/107 (63%) Query: 7 LEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQL 66 +E+ + YS L+R++KC LLW+EA+++A+RD +FR + + F+ E+ Q++ ++ + Sbjct: 90 MEERVLRYYSNLHRENKCFLLWVEAKLLAVRDGRFRMRFNAFMHEKLEQLSAYIREFSAR 149 Query: 67 TGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFL 113 GT + PP +AIGLM LC+GV F Y P V + AE VL+ F Sbjct: 150 VGTPMLMPPETLAIGLMGLCDGVQFFYTVDPQNVPAEMAEKVLAGFF 196 >B1G746.1 B1G746_9BURK Transcriptional regulator, TetR family Length = 178 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 69/107 (64%) Query: 7 LEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQL 66 +E+ + YS L+R++KC LLW+EA+++A+RD +FR + + F+ E+ Q+ +V + + Sbjct: 63 MEERVMRYYSNLHRENKCFLLWVEAKLLAVRDGRFRLRFNAFMHEKLEQLAAYVSEFSER 122 Query: 67 TGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFL 113 GT L P +A+GLM LC+GV F Y P V +TAE+VL+ F Sbjct: 123 VGTPLPLPAATLALGLMGLCDGVQFFYTVDPQNVPSETAEAVLAGFF 169 >E8YM37.1 E8YM37_9BURK Regulatory protein TetR Length = 205 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 68/107 (63%) Query: 7 LEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQL 66 +E+ + YS L R++KC LLW+EA+++A+RD +FR + + FL E+ Q+ +V + + Sbjct: 90 MEERVMRYYSNLPRENKCFLLWVEAKLLAVRDGRFRLRFNAFLHEKLEQLAAYVREFSER 149 Query: 67 TGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFL 113 GT L P +A+GLM LC+GV F + P V G+ AE+VL+ F Sbjct: 150 VGTPLPLPAEMLAMGLMGLCDGVQFFHAVDPQNVPGEMAEAVLTGFF 196 >E1T9W4.1 E1T9W4_BURSG Regulatory protein TetR Length = 205 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 67/107 (62%) Query: 7 LEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQL 66 +E + YS L+R++KC LLW+EA+++A RD +FR + + FL E+ Q++ +V + + Sbjct: 90 MEQRVMHYYSNLHRENKCFLLWVEAKLLAARDGRFRLRFNAFLHEKLAQLSAYVREFSER 149 Query: 67 TGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFL 113 GT L P +A+GLM LC+GV F + P V G A++VL+ F Sbjct: 150 VGTPLPLPAEMLAMGLMGLCDGVQFFHTVDPQNVPGDMAQAVLAGFF 196 >B2T529.1 B2T529_BURPP Transcriptional regulator, TetR family Length = 205 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 67/107 (62%) Query: 7 LEDELAAQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQL 66 +E+ + YS L+R++KC LLW EA+++A+RD +FR + + F+ ++ Q+ ++ + Sbjct: 90 MEERVLRYYSNLHRENKCFLLWAEAKLLAVRDGRFRIRFNAFMHDKLEQLGVYIREFSAR 149 Query: 67 TGTTLSAPPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFL 113 GT + PP +AIGLM+LC+G+ F Y P V + E+VL+ F Sbjct: 150 VGTPMLMPPETLAIGLMSLCDGLQFFYTVDPQNVPAERVEAVLAGFF 196 >B9C6P3.1 B9C6P3_9BURK Transcriptional regulator, TetR family Length = 206 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 1/111 (0%) Query: 13 AQYSRLYRDDKCSLLWMEARIVALRDEKFRAQLDGFLEERYRQITGFVEAYGQLTGTTLS 72 A Y +L+RDD+ SLLW+EA++ A RD KFR + + FL + Q+ F+ + GT L Sbjct: 96 AYYRKLFRDDEYSLLWVEAKLQAARDAKFRVRFNQFLHGKRVQMAEFIRRFADRAGTPLL 155 Query: 73 APPREIAIGLMALCEGVSFSYRCVPHIVDGKTAESVLSWFLKASIAVPPAP 123 P +A GLM+LC+GV Y P V + AESVL+ F A + + AP Sbjct: 156 LPAETLAFGLMSLCDGVQSYYTADPQHVSAEAAESVLAGFF-ARVVLGRAP 205