BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0175.p (1405 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IW35.1 D8IW35_HERSS Hemagglutinin-like protein 2696 0.0 A6SYP9.1 A6SYP9_JANMA Hemagglutinin-related protein 198 7e-48 Q1QQ89.1 Q1QQ89_NITHX Filamentous hemagglutinin-like protein 190 1e-45 E0NYI6.1 E0NYI6_9FIRM Putative uncharacterized protein 188 6e-45 C1DS58.1 C1DS58_AZOVD Filamentous hemagglutinin domain-containin... 187 1e-44 Q1QPP8.1 Q1QPP8_NITHX Filamentous hemagglutinin-like protein 184 1e-43 Q48NF6.1 Q48NF6_PSE14 Haemagglutination activity domain family 183 2e-43 B2IBJ5.1 B2IBJ5_BEII9 Filamentous haemagglutinin family outer me... 179 5e-42 A6VZU3.1 A6VZU3_MARMS Filamentous haemagglutinin family outer me... 175 6e-41 D7GKE0.1 D7GKE0_ECOLX Putative heamagglutinin afimbrial adhesin 172 3e-40 >D8IW35.1 D8IW35_HERSS Hemagglutinin-like protein Length = 1422 Score = 2696 bits (6988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1394/1405 (99%), Positives = 1397/1405 (99%) Query: 1 LLPPSLTVRVGRRRLTLSWRARKPLPQLLAGLLRRSWTRLLAPALRISVATAAVCGAWQA 60 LLPPSLTVRVGRRRLTLSWRARKPLPQLLAGLLRRSWTRLLAPALRISVATAAVCGAWQA Sbjct: 18 LLPPSLTVRVGRRRLTLSWRARKPLPQLLAGLLRRSWTRLLAPALRISVATAAVCGAWQA 77 Query: 61 PVLAAAPAPGTLPTGWSVVNGNVTFTQNGNILNINQLSPQAIAQFLSFSIGADATVNVNQ 120 PVLAAAPAPGTLPTGWSVVNGNVTF QNGNILNINQLSPQAIAQFLSFSIGADATVNVNQ Sbjct: 78 PVLAAAPAPGTLPTGWSVVNGNVTFIQNGNILNINQLSPQAIAQFLSFSIGADATVNVNQ 137 Query: 121 PSAAAALLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDS 180 PSAAAALLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDS Sbjct: 138 PSAAAALLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDS 197 Query: 181 DFLAGKLNFARQGNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSAQGEVILAAGETV 240 DFLAGKLNFARQGNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSAQGEVILAAGETV Sbjct: 198 DFLAGKLNFARQGNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSAQGEVILAAGETV 257 Query: 241 TLADTATPGVTVNVTGSAGNVTNLGSITAEAGRIGVAAGLINNSGVINASSVVREGGRIF 300 TLADTATPGVTVNVTGSAGNVTNLGSITAEAGRIGVAAGLINNSGVINASSVVREGGRIF Sbjct: 258 TLADTATPGVTVNVTGSAGNVTNLGSITAEAGRIGVAAGLINNSGVINASSVVREGGRIF 317 Query: 301 LRASQNLNTSASSSIHADGSRGGNIALVAQDQAFIDGDVSATGAPGQGGFVETSGLKRLD 360 LRASQNL TSASSSIHADGSRGGNIALVAQDQAFIDGDVSATGAPGQGGFVETSGLKRLD Sbjct: 318 LRASQNLTTSASSSIHADGSRGGNIALVAQDQAFIDGDVSATGAPGQGGFVETSGLKRLD 377 Query: 361 VVKAPTLGAGGTWLIDPSDLEVVSGGSRTVSTSTGNGSYAISANGSSSQIGADTIVGQLE 420 VVKAPTLGAGGTWLIDPSDLEVVSGGSRTVSTSTGNGSYAISANGSSSQIGADTIVGQLE Sbjct: 378 VVKAPTLGAGGTWLIDPSDLEVVSGGSRTVSTSTGNGSYAISANGSSSQIGADTIVGQLE 437 Query: 421 AGVNVTLATGADGSQAGNITVSSAIVKEAGGAASLTLNAANNISINADIRSTSGALTLTL 480 AGVNVTLATGADGSQAGNITVSSAIVK+AGGAASLTLNAANNISINADIRSTSGALTLTL Sbjct: 438 AGVNVTLATGADGSQAGNITVSSAIVKQAGGAASLTLNAANNISINADIRSTSGALTLTL 497 Query: 481 HTGTGEGVDFSAARQSTIGNGARISLNGGDLYAMDGVEGRGNLLISNGSVWLDGTSTLRA 540 HTG GEGVDFSAARQSTIGNGARISLNGGDLYAMDGVEGRGNLLISNGSVWLDGTSTLRA Sbjct: 498 HTGAGEGVDFSAARQSTIGNGARISLNGGDLYAMDGVEGRGNLLISNGSVWLDGTSTLRA 557 Query: 541 GRLQLDGGGSLVYASGNSSVTLNDALINNGTIQVNASGRLYSDGGVYNNGNLSLADGTSL 600 GRLQLDGGGSLVYASGNSSVTLNDALINNGTIQVNASGRLYSDGGVYNNGNLSLADGTSL Sbjct: 558 GRLQLDGGGSLVYASGNSSVTLNDALINNGTIQVNASGRLYSDGGVYNNGNLSLADGTSL 617 Query: 601 MASSTSLSNNGTVTLSNGTLNFSSITNNQNATILGSGSLVAAEGVVNNGVLAPGGDGIIG 660 MASSTSLSNNGTVTLSNGTLNFSSITNNQNATILGSGSLVAAEGVVNNGVLAPGGDGIIG Sbjct: 618 MASSTSLSNNGTVTLSNGTLNFSSITNNQNATILGSGSLVAAEGVVNNGVLAPGGDGIIG 677 Query: 661 NLTIAGNYTQGDTGAMLIDVTPAGSNDNVVFSGAFAHLGGMLKTHVLGNVSEVAEGSNFM 720 NLTIAGNYTQGDTGAMLIDVTPAGSNDNVVFSGAFAHLGGMLKTHVLGNVSEVAEGSNFM Sbjct: 678 NLTIAGNYTQGDTGAMLIDVTPAGSNDNVVFSGAFAHLGGMLKTHVLGNVSEVAEGSNFM 737 Query: 721 PFNFQSTSLGDSYFRYVSGDVSNIDGIKTMLKANYTEGPLRLTMMRSTTFYASGSNSYWG 780 PFNFQSTSLGDSYFRYVSGDVSNIDGIKTMLKANYTEGPLRLTMMRSTTFYASGSNSYWG Sbjct: 738 PFNFQSTSLGDSYFRYVSGDVSNIDGIKTMLKANYTEGPLRLTMMRSTTFYASGSNSYWG 797 Query: 781 ARETWSGGGSTYLPTEIDTVVIDSNNTVTLSDGVGDKISRLQVKGSGQFNQTGGALTVVN 840 ARETWSGGGSTYLPTEIDTVVIDSNNTVTLSDGVGDKISRLQVKGSGQFNQTGGALTVVN Sbjct: 798 ARETWSGGGSTYLPTEIDTVVIDSNNTVTLSDGVGDKISRLQVKGSGQFNQTGGALTVVN 857 Query: 841 GAVIDGTVDISGGSFTSNGSNSVTGSVTLGMQDSGVRGNATLAGWTSVRSGAQINVNGGT 900 GAVIDGTVDISGGSFTSNGSNSVTGSV LGMQD GVRGNATLAGWTSVRSGAQINVNGGT Sbjct: 858 GAVIDGTVDISGGSFTSNGSNSVTGSVALGMQDGGVRGNATLAGWTSVRSGAQINVNGGT 917 Query: 901 LNFSGTSNLLEGSTVDLSAGQLTFNGTSNLAGTVTVRGGTLTTAGDTTLSGNMQVNSGNV 960 LNF+GTSNLLEGSTVDLSAGQLTFNGTSNLAGTVTVRGGTLTTAGDTTLSGNMQVNSGNV Sbjct: 918 LNFNGTSNLLEGSTVDLSAGQLTFNGTSNLAGTVTVRGGTLTTAGDTTLSGNMQVNSGNV 977 Query: 961 TLGGVTDGAGRLTLGTAGSNEGNDDGGNLIALPPVGDGSVTIANASHSSLNVDLNSGDLT 1020 TLGGVTDG GRLTLGTAGSNEGNDDGGNLIALPPVGDGSVTIANASHSSLNVDLNSGDLT Sbjct: 978 TLGGVTDGTGRLTLGTAGSNEGNDDGGNLIALPPVGDGSVTIANASHSSLNVDLNSGDLT 1037 Query: 1021 LGGDVRLAALNVTQGNVTGNIGSRLVVAESFQQTGGNLTLADAALSQSNGSLIVGNITAN 1080 LGGDVRLAALNVTQGNVTGNIGSRLVVAESFQQTGGNLTLADAALSQSNGSLIVGNITAN Sbjct: 1038 LGGDVRLAALNVTQGNVTGNIGSRLVVAESFQQTGGNLTLADAALSQSNGSLIVGNITAN 1097 Query: 1081 NLVLEAQSANIFQQTGSALHVKQQLITSATDGISLTETGNQIAGFAANNQGSGDIRLINQ 1140 NLVLEAQSANIFQQ+GSALHVKQQLITSATDGISLTETGNQIAGFAANNQGSGDIRLINQ Sbjct: 1098 NLVLEAQSANIFQQSGSALHVKQQLITSATDGISLTETGNQIAGFAANNQGSGDIRLINQ 1157 Query: 1141 LNTADASVVTINGVHTVHGDIHIDNTGGMRTAALGDSASFLGALPSSTEGDPPGTAAKLA 1200 LNTADASVVTINGVHTVHGDIHIDNTGGMRTAALGDSASFLGALPSS EGDPPGTAAKLA Sbjct: 1158 LNTADASVVTINGVHTVHGDIHIDNTGGMRTAALGDSASFLGALPSSAEGDPPGTAAKLA 1217 Query: 1201 MLGMSSNTNGQVKTDNGAVTMVTHSPMAIGAGGVSATGDITLTASASAGSNDTLVVNGVL 1260 MLGMSSNTNGQVKTDNGAVTMVTHSPMAIGAGGVSATGDITLTASASAGSNDTLVVNGVL Sbjct: 1218 MLGMSSNTNGQVKTDNGAVTMVTHSPMAIGAGGVSATGDITLTASASAGSNDTLVVNGVL 1277 Query: 1261 VSLGGNIRLSAGDSMTINANISTSPPGVALFSVDSGAVIGYAQGVRIVDANGTRIPVPAS 1320 VSLGGNIRLSAGDSMTINANISTSPPGVALFSVDSGAVIGYAQGVRIVDANGTRIPVPAS Sbjct: 1278 VSLGGNIRLSAGDSMTINANISTSPPGVALFSVDSGAVIGYAQGVRIVDANGTRIPVPAS 1337 Query: 1321 ATSSAGGGGNTQTSQAVQQQQNQQSQNLQATVNSARLSDPNAQSTGNPVQQSSGGGQTVG 1380 ATSSAGGGGNTQTSQAVQQQQNQQSQNLQATVNSARLSDPNAQSTGNPVQQSS GGQTVG Sbjct: 1338 ATSSAGGGGNTQTSQAVQQQQNQQSQNLQATVNSARLSDPNAQSTGNPVQQSSSGGQTVG 1397 Query: 1381 GTAGSFGDDSGGDSKAARKALPMCT 1405 GTAGSFGDDSGGDSKAARKALPMCT Sbjct: 1398 GTAGSFGDDSGGDSKAARKALPMCT 1422 >A6SYP9.1 A6SYP9_JANMA Hemagglutinin-related protein Length = 2112 Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 128/300 (42%), Positives = 181/300 (60%), Gaps = 10/300 (3%) Query: 53 AVCGAWQAPVLAAAPAPGTL------PTGWSVVNGNVTFTQNGNILNINQLSPQAIAQFL 106 A+ A+ PVLAA + P+ +VVNG VTF+QNGN+ I SP AI + Sbjct: 14 AIRCAFLPPVLAACLGATGISSAIATPSNPTVVNGQVTFSQNGNVYTITN-SPSAIINWN 72 Query: 107 SFSIGADATVNVNQPSAAAALLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSID 166 SFSI A V Q ++++++L +++G D SQI G L + G V L NPNG++ G I+ Sbjct: 73 SFSINAGELVRFIQQNSSSSVLNRITGQDPSQIMGALESNGRVFLINPNGIMFGAGAQIN 132 Query: 167 AGRFIATSLAISDSDFLAGKLNFARQGNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIK 226 +A++LAISDS+FLAGK F AG V+N G I + +GG VYLI V+NSGII Sbjct: 133 VAGLVASTLAISDSNFLAGKNKFTAGDVAGAVNNMGAITTPSGGQVYLIAPDVTNSGIIT 192 Query: 227 SAQGEVILAAGETVTLADTATPGVTVNVTGSAGNVTNLGSITAEAGRIGVAAGLINNSGV 286 S +GEV+LAAG +V LAD++ P + V V+ + NLG + A+ GRIG+ A LIN G Sbjct: 193 SPKGEVVLAAGRSVQLADSSNPDMHVVVSAPSDRALNLGDVIAQGGRIGIYAALINQRGK 252 Query: 287 INA-SSVVREGGRIFLRASQNLNTSASSSIHADG-SRGGNIALVAQDQAFI-DGDVSATG 343 +NA S+V+ E G+I L+AS++ A S A G +GG + ++ Q A D + A+G Sbjct: 253 LNANSAVLGENGKIVLKASRDTLLEAGSVTSATGVGQGGEVQVLGQRVALTGDARIDASG 312 >Q1QQ89.1 Q1QQ89_NITHX Filamentous hemagglutinin-like protein Length = 2334 Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 172/475 (36%), Positives = 249/475 (52%), Gaps = 72/475 (15%) Query: 23 KPLPQLLAGLLRRSWTRLLAPALRISVATAAVCGAWQAPVLAAAPAPGTLPTGWSVVNGN 82 K LP + LR T LL T AVC P A+A +P TG SVV G+ Sbjct: 22 KRLPSPFS--LRFFRTSLLV--------TTAVCAVMVLPHAASAQSP----TGGSVVAGS 67 Query: 83 VTFTQNGNILNINQLSPQAIAQFLSFSIGADATVNVNQPSAAAALLAKVSGGDISQIYGK 142 Q G + NINQ S +A+ + FS+GA TVN NQP+++AA L +V G + S I G Sbjct: 68 AGIAQAGTVTNINQSSQKAVINWQGFSVGAQNTVNFNQPNSSAATLNRVIGNESSVINGA 127 Query: 143 LSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDSDFLAGKLNFARQGNAGIVDNQG 202 ++A G V + N NGV+ G ++ G +A++L IS++DF+AG F+ NA +V NQG Sbjct: 128 INANGQVFIVNSNGVLFGQGAQVNVGGLVASTLDISNNDFMAGNYKFSGTSNASVV-NQG 186 Query: 203 KIQSATGGSVYLIGSSVSNSGIIKSAQGEVILAAGETVTLADTATPGVTVNVTGSAGN-- 260 +I++ GG V L+G +VSN G+I + G V +AAG+ +TL + V + N Sbjct: 187 RIRTHGGGYVALLGKTVSNEGMIAAKLGTVAMAAGDKITLNFGGDSLLDVTIDKGTLNAL 246 Query: 261 VTNLGSITAEAGRI--------GVAAGLINNSGVINASSVVREGGRIFLRASQNLNTSAS 312 V N +I A G++ V + +NNSG+I A ++ L+ N T Sbjct: 247 VQNKRAIIANGGQVIMTAKAADQVLSAQVNNSGIIQARTMAA------LKGGSNGGT--- 297 Query: 313 SSIHADGSRGGNIALVAQ-DQAFIDGDVSATGAP--GQGGFVETSG--LKRLD---VVKA 364 + G I L+AQ A + G + A+ AP G GGF+ETSG +K D + Sbjct: 298 -------VKLGKIKLLAQGGTAKVSGKLDAS-APKGGDGGFIETSGDHVKIADDAVITTN 349 Query: 365 PTLGAGGTWLIDPSDLEVVSG-GSRTVSTSTGNGSYAISANGSSSQIGADTIVGQLEAGV 423 G GTWL+DP+D +V G G++T +S IG +T++ +L Sbjct: 350 SVYGKTGTWLVDPTDFHIVYGSGAQT-----------------TSGIGVNTLLARLTDN- 391 Query: 424 NVTLATGADGSQAGNITVSSAIVKEAGGAASLTLNAANNISINADIRSTSGALTL 478 NVT+ T A GS++G+I V + + +G SLTL AANNI+INA + + SG LTL Sbjct: 392 NVTIVTSASGSESGDIDVEAPLTWTSGN--SLTLGAANNININAPM-TWSGTLTL 443 Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 2/158 (1%) Query: 81 GNVTFTQNGNILNINQLSPQAIAQFLSFSIGADATVNVNQPSAAAALLAKVSGGDISQIY 140 G VT G I Q + +AI + FSI + TV NQPS+ A +L +V+G D S I Sbjct: 1285 GTVTVVDTGLTATITQTTDRAIIDWFRFSIASGETVTFNQPSSTAVILNRVTGSDQSIIS 1344 Query: 141 GKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDSDFLAGKLNFARQGNA-GIVD 199 G L+A G V + N GV+ ++ G +A++LAI++SDF AG +F+ G + G V Sbjct: 1345 GALNANGRVFIVNSAGVIFNAGSQVNVGGLVASTLAITNSDFSAGNYSFSSPGGSIGPVA 1404 Query: 200 NQGKIQSATGGSVYLIGSS-VSNSGIIKSAQGEVILAA 236 G I G V L+G+S V N+G I + G+VILA+ Sbjct: 1405 AAGNISVGNGSFVALLGASNVGNTGRITATNGKVILAS 1442 >E0NYI6.1 E0NYI6_9FIRM Putative uncharacterized protein Length = 4272 Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 161/477 (33%), Positives = 228/477 (47%), Gaps = 75/477 (15%) Query: 61 PVLAAAPAPGTLPTGWSVVNGNVTFTQNGNILNINQLSPQAIAQFLSFSIGADATVNVNQ 120 PVLA LP G V G+ N + I+Q S A+ + SF+I A V+V Q Sbjct: 35 PVLA-------LPQGGQVAAGDAQIASNAAEMAIHQNSQNAVINWQSFNIAAGERVSVLQ 87 Query: 121 PSAAAALLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDS 180 P+A AALL +V G + S+I+G+L A G V L NP GV P +DAG IA+++ I+++ Sbjct: 88 PNAQAALLNRVLGSNPSEIFGQLQANGRVFLVNPAGVYFAPGAQVDAGAIIASTMNITNA 147 Query: 181 DFLAGKLNFARQGNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSAQGEVILAAGETV 240 DF+AG+ NF + G V N+ + + GG + L+G V N G++ + +G +LAAGE V Sbjct: 148 DFMAGRYNFVGTEHDGKVINKASLAAQNGGLIALLGKDVVNEGVVVAKKGTAVLAAGEEV 207 Query: 241 TLADTATPGVTVNVTGSAGN--VTNLGSITAEAGRIGVAAGL--------INNSGVINAS 290 TL V V T +A VTN G + A+ G + ++A +N GV+ AS Sbjct: 208 TLDFGGDGKVEVVPTKAALEQAVTNKGLVEADGGLVFMSAATGEMLTRSAVNQDGVVRAS 267 Query: 291 SVVREGGRIFLRASQ-NLNTSA-------------------------------------- 311 S+ G I + A NL T + Sbjct: 268 SLADAPGAIRITAHDVNLGTGSLTDASGMQGGTIEIGGGWQGTGTLAHATNVSIAHGAAL 327 Query: 312 SSSIHADGSRGGNIALVAQDQAFIDGDVSATGAPGQGGFVETSGLKRL---DVVKAPTLG 368 + ADG GG +A+ + + G+++A G G GG VETSG K DV + G Sbjct: 328 RADATADGGAGGTVAVWSDGETRFAGEITARGR-GAGGMVETSGAKVWITGDVRASSEHG 386 Query: 369 AGGTWLIDPSDLEVVSGGSRTVSTSTGNGSYAISANGSSSQIGADTIVGQLEAGVNVTLA 428 G WLIDP D+EV + A + SQ T+ L G +VT+ Sbjct: 387 KAGEWLIDPGDIEVK--------------TRAAGDPEAGSQADVQTVTNSLNGGTSVTIQ 432 Query: 429 TGADGSQAGN-ITVSSAIVKEAGGAASLTLNAANNISINADIRSTSGALTLTLHTGT 484 T N ITVS AI K AGG A+LTL A N++INA+I ST+G L + + + T Sbjct: 433 TEKLTEPNDNSITVSDAITKTAGGDATLTLKATGNVNINANITSTAGKLNVDITSDT 489 >C1DS58.1 C1DS58_AZOVD Filamentous hemagglutinin domain-containing protein Length = 1419 Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 169/482 (35%), Positives = 237/482 (49%), Gaps = 67/482 (13%) Query: 56 GAWQAPVLAAAPAP-----GTLPTGWSVVNGN-VTFTQNGNILNINQLSPQAIAQFLSFS 109 G + P+LA +P LP G +V G+ + T N L I Q S + + F Sbjct: 30 GRLRLPILALCLSPLPLQAADLPEGGQIVLGDGLIGTPASNNLQILQNSRKLAIDWQRFD 89 Query: 110 IGADATVNVNQPSAAAALLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGR 169 IGAD +V QP + A L +V G D S I GKL A G V L NPNG++ G S++ G Sbjct: 90 IGADKSVTFRQPDSGAIALNRVIGSDGSAILGKLDANGQVFLINPNGILFGQGASVNVGG 149 Query: 170 FIATSLAISDSDFLAGKLNFARQGNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSAQ 229 +A++L + + DF AG F G ++N G I ++ GGSV L+G V N G+I++ Sbjct: 150 LVASTLDLGNEDFEAGSYRFKANGRPAGINNLGSIAASDGGSVALLGGQVGNDGVIQAKL 209 Query: 230 GEVILAAGETVTLADTATPG---VTVNVTGSAGNVTNLGSITAEAGRIGVAAG------- 279 G V+LAAG+ +TL D A G V V+ + N I A+ G + + AG Sbjct: 210 GTVVLAAGDQITL-DFAGDGLLNVQVDRAAADALAHNGKLIAADGGSVVMTAGSGDALLK 268 Query: 280 -LINNSGVINASSVVREGGRIFLRASQNLNTSASSSIHADGSRGGNIALVAQDQAFIDGD 338 ++NN GVI A ++ GRI L L + + GG++ A D Sbjct: 269 TVVNNEGVIEARTLGNRNGRIAL-----LGDTGQGIVQV----GGSLDASAPDT------ 313 Query: 339 VSATGAPGQGGFVETSG--LKRLDVVKAPTL---GAGGTWLIDPSDLEVVSGGSRTVSTS 393 G GGF+ETSG ++ D + T G GTW I+PSDL + +GGS Sbjct: 314 -------GDGGFIETSGATVRVADTARVTTRAGTGKTGTWRIEPSDLSIGAGGSP----- 361 Query: 394 TGNGSYAISANGSSSQIGADTIVGQLEAGVNVTLATGADGSQAGNITVSSAIVKEAGGAA 453 + S IGADT+ L A NV +A+G DG+ G+I V++A+ A Sbjct: 362 ------------AGSSIGADTLSANLAA-TNVEVASGNDGTGPGDIEVNAAVGWSA--VT 406 Query: 454 SLTLNAANNISINADIRSTSGALTLTLHTGTGEGVD-FSAARQSTIGNGARISLNGGDLY 512 +LTL A N+I I ADI +T L L+ G G F+ A + GNGAR S+N GDLY Sbjct: 407 TLTLTAHNDIDIRADIDATGNGAGLALNPGGNAGYRLFNGASITLSGNGARFSVN-GDLY 465 Query: 513 AM 514 + Sbjct: 466 TL 467 >Q1QPP8.1 Q1QPP8_NITHX Filamentous hemagglutinin-like protein Length = 2328 Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 161/452 (35%), Positives = 240/452 (53%), Gaps = 61/452 (13%) Query: 49 VATAAVCGAWQAPVLAAAPAPGTLPTGWSVVNGNVTFTQNGNILNINQLSPQAIAQFLSF 108 +ATAA+C A ++ A PA PT +VV G + +Q G + NINQ S +AI + F Sbjct: 37 LATAAIC----AVMVFARPASAQSPTSGNVVAGAASISQAGAVTNINQSSQKAIINWQGF 92 Query: 109 SIGADATVNVNQPSAAAALLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAG 168 S+GA TVN NQPS++AA L +V G + S I G ++A G V + N NGV+ G ++ G Sbjct: 93 SVGAQNTVNFNQPSSSAATLNRVIGNEQSVINGAINANGQVFIVNSNGVLFGQGAQVNVG 152 Query: 169 RFIATSLAISDSDFLAGKLNFARQGNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSA 228 +A++L IS++DF+AG F+ NA +V NQG+I++ GG V L+G +VSN G+I + Sbjct: 153 GLVASTLDISNNDFMAGNYKFSGTSNASVV-NQGRIRAHGGGYVALLGKTVSNEGMIAAK 211 Query: 229 QGEVILAAGETVTLADTATPGVTVNVTGSAGN--VTNLGSITAEAGRI--------GVAA 278 G V +AAG+ +TL + V + N V N +I A G++ V + Sbjct: 212 LGTVAMAAGDKITLNFGGDSLLDVTIDKGTLNALVQNKRAIIANGGQVIMTAKAADQVLS 271 Query: 279 GLINNSGVINASSVVREGGRIFLRASQNLNTSASSSIHADGSRGGNIALVAQ-DQAFIDG 337 +NNSG+I A ++ L+ N T + G I L+AQ A + G Sbjct: 272 AQVNNSGIIQARTMAA------LKGGSNGGT----------VKLGKIKLLAQGGTAKVSG 315 Query: 338 DVSATGAP--GQGGFVETSG--LKRLD---VVKAPTLGAGGTWLIDPSDLEVVSGGSRTV 390 + A+ AP G GGF+ETSG +K D + G G WLIDP+D +V+G S Sbjct: 316 KLDAS-APKGGDGGFIETSGDHVKIADDAVITTKAASGNSGAWLIDPTDFSIVTGSSAQ- 373 Query: 391 STSTGNGSYAISANGSSSQIGADTIVGQLEAGVNVTLATGADGSQAGNITVSSAIVKEAG 450 + S IG T++ L G +VT+ T + G+ AG+I +++A+ A Sbjct: 374 ---------------TDSGIGVATLLSNLANG-DVTIVTSSAGTGAGDININAALNWSAT 417 Query: 451 GAA----SLTLNAANNISINADIRSTSGALTL 478 A SL L AANNI+++A + ++G LTL Sbjct: 418 SATPSTHSLILAAANNINVDAPVTWSAGTLTL 449 Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 61/160 (38%), Positives = 97/160 (60%), Gaps = 2/160 (1%) Query: 94 INQLSPQAIAQFLSFSIGADATVNVNQPSAAAALLAKVSGGDISQIYGKLSATGTVVLYN 153 + Q P I +L F+I ++ TV+ QPS+ + +L +V+G + S I G L+ATG V + N Sbjct: 1334 VTQTLPNTIIDWLRFNIASNETVDFIQPSSTSVILNRVTGNEQSVIAGALNATGRVFIVN 1393 Query: 154 PNGVVIGPSGSIDAGRFIATSLAISDSDFLAGKLNFARQGNAGIVDNQGKIQSATGGSVY 213 PNG++ + ++ G +A++L ISD+DF G +FA G V +G I +A+G + Sbjct: 1394 PNGILFSSTSQVNVGALVASTLNISDNDFANGNYSFAALDGMGSVTARGAITAASGEFII 1453 Query: 214 LIGS-SVSNSGIIKSAQGEVILAAGETVTLA-DTATPGVT 251 L G+ V+NSG +K+ G +LA +TLA +TA PG+T Sbjct: 1454 LAGNGGVTNSGSLKAPGGSAVLAGVNNLTLAMNTAEPGLT 1493 >Q48NF6.1 Q48NF6_PSE14 Haemagglutination activity domain family Length = 1583 Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 171/497 (34%), Positives = 245/497 (49%), Gaps = 75/497 (15%) Query: 12 RRRLTLS--WRA-RKPLPQLLAGLLRRSWTRLL-----APALRISVATAAVCGAWQAPVL 63 +R+ L+ W A + L A LR WT + PA SV A V Sbjct: 2 KRQAPLATPWPAASRALNCEPAAWLR--WTFRVNVPYRKPAFH-SVHLAMVVSLLMVSTP 58 Query: 64 AAAPAPGTLPTGWSVVNGNVTFTQNGNILNINQLSPQAIAQFLSFSIGADATVNVNQPSA 123 A PG LPTG VV G Q GN L + Q S +AI + SF IG +A+V NQP + Sbjct: 59 GVAVEPGALPTGGKVVGGQALLHQQGNQLVVEQHSDRAILDWQSFDIGQNASVRFNQPGS 118 Query: 124 AAALLAKVS-GGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDSDF 182 A L +V+ GG S I G LSA G V L N GV+ GPS ++ G +A++L I++ DF Sbjct: 119 NATALNRVTGGGGQSLIQGSLSANGRVYLVNGAGVLFGPSAQVNTGGLVASTLDIANEDF 178 Query: 183 LAGKLNFARQGNA-GIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSAQGEVILAAGETVT 241 LAG+ F + G V NQG I SA G+V L+G +V N+G I + G V+LA G+ V+ Sbjct: 179 LAGRDRFVLTNQSKGEVVNQGHI-SARNGTVALLGRTVGNTGSISADNGNVVLAGGQEVS 237 Query: 242 LADTATPGVTVNVTGSA--GNVTNLGSITAEAGRI--------GVAAGLINNSGVINASS 291 A A + + V+ S ++ N G+I A+ G+I +A+ +++N+G + A + Sbjct: 238 FAAGADGHLQIAVSASELQSSIRNGGAIYADGGQIVLNAQGSNALASAVVSNTGTLQAHT 297 Query: 292 VVREGGRIFLRASQNLNTSASSSIHADGSRGGNIALVAQ-DQAFIDGDVSATGAPGQGGF 350 + G+I L AD GG + D + I+G G GGF Sbjct: 298 MAEHEGKILLL--------------ADLEHGGRAEVAGTLDASAING--------GNGGF 335 Query: 351 VETSGLK-------RLDVVKAPTLGAGGTWLIDPSDLEVVSGGSRTVSTSTGNGSYAISA 403 VETSG + R+ +AP G G WL+DP+D V +GG Sbjct: 336 VETSGAQVQIAPATRV-TTQAPK-GQTGKWLVDPTDFTVSAGGQAQ-------------- 379 Query: 404 NGSSSQIGADTIVGQLEAGVNVTLATGADGSQAGNITVSSAIVKEAGGAASLTLNAANNI 463 ++S IGADT+V L A NV L T A GS+ G++ + + I A A +L+L ++ Sbjct: 380 --TTSGIGADTLVSNL-ASTNVLLQTDAQGSEPGDLNIQAPISWNA--ATTLSLLTLRDV 434 Query: 464 SINADIRSTSGALTLTL 480 +INA I + +G LTL + Sbjct: 435 NINAPISAVNGGLTLNI 451 >B2IBJ5.1 B2IBJ5_BEII9 Filamentous haemagglutinin family outer membrane protein Length = 2387 Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 152/425 (35%), Positives = 229/425 (53%), Gaps = 52/425 (12%) Query: 73 PTGWSVVNGNVTFTQNGNILNINQLSPQAIAQFLSFSIGADATVNVNQPSAAAALLAKVS 132 P G SVV G T +Q G++ NI Q S +AI + SFSI TVN NQPS++AA+L +V+ Sbjct: 54 PDGGSVVAGQATISQAGSVTNITQGSNRAIINWNSFSINQHETVNFNQPSSSAAILNRVT 113 Query: 133 GGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDSDFLAGKLNFARQ 192 G + S I G L+A G V L NP G++ + ++ G +A++L I++ DF+AGK F+ Sbjct: 114 GNEQSVIAGALNANGQVFLVNPAGILFSSTAQVNVGGIVASTLDIANKDFMAGKYTFSGT 173 Query: 193 GNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSAQGEVILAAGETVTLADTATPGVTV 252 A ++ NQG I + +GG V L+G +V N G+I + G V LA+GE +TL + V Sbjct: 174 SQASVI-NQGHIHAHSGGYVALLGKTVENDGVISAKMGTVALASGEKITLNFNGDSLIDV 232 Query: 253 NVTGSAGN--VTNLGSITAEAGRIGVAA--------GLINNSGVINASSVVREGGRIFLR 302 + + V N +I A+ GR+ + A +NN+G+I A ++ L Sbjct: 233 TIDKGTLDALVANKRAIKADGGRVIMTAKAADQLLSAQVNNTGIIQARTLSD------LT 286 Query: 303 ASQNLNTSASSSIHADGSRGGNIALVAQ-DQAFIDGDVSATGAP--GQGGFVETSGLK-- 357 + S S+H G I L+AQ + G + A+ AP G+GG +ETSG K Sbjct: 287 GGHGTASGTSGSVHV-----GTIKLLAQGGTTKVAGTLDAS-APKGGKGGSIETSGDKVQ 340 Query: 358 ----RLDVVKAPTLGAGGTWLIDPSDLEVVSGGSRTVSTSTGNGSYAISANGSSSQIGAD 413 L K+ + G G+WLIDP+D + G GS +++++G IGA Sbjct: 341 VASDALITTKSAS-GQNGSWLIDPTDFTI------------GYGSDSLTSSG----IGAT 383 Query: 414 TIVGQLEAGVNVTLATGADGSQAGNITVSSAIVKEAGGAASLTLNAANNISINADIRSTS 473 T+ L A NVT+ T + GS G++TV++ + +G SLTL A NN+ +NA + + Sbjct: 384 TLQNML-ANTNVTIVTSSGGSGNGDLTVAAPVSWSSGN--SLTLAAINNLDVNAAVSWSG 440 Query: 474 GALTL 478 GALTL Sbjct: 441 GALTL 445 Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 13/219 (5%) Query: 67 PAPGTLPTGWSVVNGNVTFTQNGNILNINQLSPQAIAQFLSFSIGADATVNVNQPSAAAA 126 PA G + T +G T + G + INQ + +AI +L FS+GA ++ +QPS+++ Sbjct: 1264 PATGIIST-----SGTATISTVGTVTTINQSTEKAIIDWLRFSLGAGESLKFDQPSSSSI 1318 Query: 127 LLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISDSDFLAGK 186 L +V + S I G LSA G V + NPNG++ S++ G +A++ ++D DFL G Sbjct: 1319 TLNRVISQEASVIAGSLSANGRVFILNPNGILFSAGSSVNVGALVASTQTMADQDFLNGN 1378 Query: 187 LNFARQGNAGIVDNQGKIQSATGGSVYLIGSS-VSNSGIIKSAQGEVILAAGETVTLA-- 243 F V G I A GG + L+ + V++SG + + G ILAA +++TL Sbjct: 1379 YLFQVSNTTASVVANGDIVIADGGFLALLSQNGVTSSGSVAAHNGTAILAATQSLTLTLN 1438 Query: 244 --DTATPGVTV-NVTG--SAGNVTNLGSITAEAGRIGVA 277 D G + N+TG +AG +L S GR+ A Sbjct: 1439 DNDNGLAGFALGNLTGTTTAGGAIDLASAAGTGGRLETA 1477 >A6VZU3.1 A6VZU3_MARMS Filamentous haemagglutinin family outer membrane protein Length = 4016 Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 168/540 (31%), Positives = 264/540 (48%), Gaps = 96/540 (17%) Query: 34 RRSWTRLLAPALRISVATAAVCGAWQAPVLAAAPAPGTLPTGWSVVNGNVTFTQ-NGNIL 92 RR TRL + + G+ +++A LPT +V G+ + +Q NG L Sbjct: 34 RRHRTRL-----------SLIAGS--VFIVSAQAYADALPTNGTVSLGSGSISQPNGKTL 80 Query: 93 NINQLSPQAIAQFLSFSIGADATVNVNQPSAAAALLAKVSGGDISQIYGKLSATGTVVLY 152 NI Q + + + SFS+G D+ VN QPS+++ L +V+G D+S I G ++A G V L Sbjct: 81 NITQNTNKIAIDWQSFSVGKDSVVNFIQPSSSSVALNRVTGSDVSSIQGAINANGQVFLI 140 Query: 153 NPNGVVIGPSGSIDAGRFIATSLAISDSDFLAGKLNFARQG-NAGIVDNQGKIQSATGGS 211 NPNGV+ + ++ G IA++ +++ +F A NF +G N V N+G + + GG Sbjct: 141 NPNGVLFDTTAQVNVGGLIASTRDLTNENFSAD--NFIFEGSNGNAVINRGSLVATDGGY 198 Query: 212 VYLIGSSVSNSGIIKSAQGEVILAAGETVTLADTATPGVTVNVTGSAGNVTNLGSITAEA 271 V +I + V N G I + QG V LAAG++V + T + V + N G+I A+ Sbjct: 199 VVMIAAKVQNMGDIVANQGSVQLAAGDSVLVNLGGTVSIEVKQGAIDALILNGGAIKADG 258 Query: 272 GRI--------GVAAGLINNSGVINASSVVREGGRIFLRASQNLNTSASSSIHADGSRGG 323 G I +AA ++NN+G++ A+S+V +GG I N S +I ADG+ GG Sbjct: 259 GHILFTAKAAGDLAASVVNNTGIVEATSLVSQGGEIVFMGDDITN---SGTIVADGATGG 315 Query: 324 NIALVAQD----------------------------------QAFIDGDVSAT------- 342 L+ D + + DV + Sbjct: 316 GEILIGGDWQGENAEQYPHATKVTLTETSQISASATTQGDGGKVVVWSDVKSADSVTKVA 375 Query: 343 --------GAPGQGGFVETSGLKRLDVVKAPTLGAGGTWLIDPSDLEVVSGGSRTVSTST 394 G GG +ETSG L+V K T+ A WL+DP+++ + +G Sbjct: 376 GNIRAQGLGENTNGGKIETSG-HVLNVAKGTTVEA-AEWLLDPTNITISAG--------- 424 Query: 395 GNGSYAISANGSSSQIGADTIVGQLEAGVNVTLATGADGSQAGNITVSSAIVKEAGGAAS 454 +GS ++ + S IGA+TI L AG NVT+ T ++ + G+IT+++ I K +G A+ Sbjct: 425 SDGS--LTDGETQSDIGAETIETALNAGTNVTVQTDSEVAGEGDITLAANISKSSGADAT 482 Query: 455 LTLNAANNISINAD--IRSTSGALTLTLHTGTGEGVDFSAARQSTIGNGARISLNGGDLY 512 LTL AANNI IN + I ST+GAL L D +++ ++G G+ I NGGD++ Sbjct: 483 LTLTAANNIVINENVSITSTTGALKTVLRADN----DINSSGSVSMGAGSSIDTNGGDVW 538 >D7GKE0.1 D7GKE0_ECOLX Putative heamagglutinin afimbrial adhesin Length = 1542 Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 193/588 (32%), Positives = 269/588 (45%), Gaps = 128/588 (21%) Query: 62 VLAAAPA-PGTLPTGWSVVNGNVTF-TQNGNILNINQLSPQAIAQFLSFSIGADATVNVN 119 ++ A PA LPTG +V G+ + T +GN +NI+Q S +A + SF IG TV Sbjct: 57 MIMAHPAMSANLPTGGQIVAGSGSIQTPSGNQMNIHQSSQNMVANWNSFDIGKGNTVQFY 116 Query: 120 QPSAAAALLAKVSGGDISQIYGKLSATGTVVLYNPNGVVIGPSGSIDAGRFIATSLAISD 179 QP ++A L +V GG SQI G L A G V L NPNGV+ G S+ F+A++ I + Sbjct: 117 QPDSSAVALNRVVGGGESQIMGNLKANGQVFLVNPNGVLFGKEASVSTSGFVASTRDIKN 176 Query: 180 SDFLAGKLNFA--RQGNAGIVDNQGKIQSATGGSVYLIGSSVSNSGIIKSAQGEVILAAG 237 DF+ + F+ ++ A IV NQG + + GG + L VSNSG I++ G+ +LAA Sbjct: 177 DDFMNRRYTFSGGQKAGAEIV-NQGALTTNAGGYIVLTADRVSNSGTIRTPGGKTVLAAS 235 Query: 238 ETVTLADTATPGVTVNVTGSAGN--VTNLGSITAEAGRIGVAA--------GLINNSGVI 287 E VTL ++V VTG N V N G ++A G++ + A ++N SGV+ Sbjct: 236 ERVTLQLDNGGLMSVQVTGDVVNALVENRGLVSARDGQVYLTALGRDMLMNTVLNVSGVV 295 Query: 288 NASSVVREGGRIFLRASQNLNTSASSSIHADGS---------RGGNIAL----------- 327 A + R+ G I L + S ++ AD + +G NI L Sbjct: 296 EAGGMRRQDGNIVLDGGDSGVVHLSGTLQADNASGQGGKVVVQGKNILLDKGSSITATGG 355 Query: 328 -------------------------VAQDQAFIDGDVSATGAPGQGGF------------ 350 V QD A I DVSAT G GG Sbjct: 356 QGGGEVYVGGGWQGKDSNIRNADKVVMQDGARI--DVSAT-QQGNGGTAVLWSDSYTNFH 412 Query: 351 ----------------VETSGLKRLD----VVKAPTLGAGGTWLIDPSDLEVVSGG---- 386 VETS L V + G G WL+D +D+ +V+G Sbjct: 413 GQISAKGGETGGNGGQVETSSQGNLQAFGTVSASAKKGKAGNWLLDSADITIVNGSNDSN 472 Query: 387 -SRTVST-STGNGSYAISANGSSSQIGADTIVGQLEAGVNVTL---ATGADGSQAGNITV 441 S+T +T S + +A +A GS+ + +I +L G +VT+ T DG+Q GNITV Sbjct: 473 DSKTETTQSPPHTQFAPTAAGSA--VSNTSINNRLNNGTSVTILTSHTAKDGAQKGNITV 530 Query: 442 SSAIVKEAGGAASLTLNAANNISINADIRSTSGALTLTLHTGTGEGVDFSAARQS----T 497 ++AI K G ASLTL A NI++N I ST G L V+ S AR S T Sbjct: 531 NAAINKSNGSDASLTLQAGGNITVNNSITSTEGKL----------NVNLSGARTSNGSIT 580 Query: 498 IGNGARISLNGGDL-YAMDGVEGRGNLLI-------SNGSVWLDGTST 537 I N A I+ NGGD+ R N+ I SNG++ L GT T Sbjct: 581 ISNNANITTNGGDITVGTTNTSNRVNISINNTTLNASNGNIQLTGTGT 628