BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0120.p (95 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IW88.1 D8IW88_HERSS Translation initiation factor IF-1 protein 180 6e-44 D0J5F9.1 D0J5F9_COMT2 Translation initiation factor IF-1 136 1e-30 D8D718.1 D8D718_COMTE Translation initiation factor IF-1 136 1e-30 B7X0Q2.1 B7X0Q2_COMTE Translation initiation factor IF-1 136 1e-30 Q5P6C0.1 IF11_AROAE Translation initiation factor IF-1 1 135 2e-30 A9BU55.1 A9BU55_DELAS Translation initiation factor IF-1 135 3e-30 F0QD10.1 F0QD10_ACIAP Translation initiation factor IF-1 135 3e-30 Q47IR5.1 IF12_DECAR Translation initiation factor IF-1 2 134 3e-30 B9MAB8.1 B9MAB8_ACIET Translation initiation factor IF-1 134 5e-30 A1W6I6.1 IF12_ACISJ Translation initiation factor IF-1 2 134 5e-30 >D8IW88.1 D8IW88_HERSS Translation initiation factor IF-1 protein Length = 87 Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 87/87 (100%), Positives = 87/87 (100%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY Sbjct: 1 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 60 Query: 69 DLNKGRIIFRHLENRGPTGPRPGFRRR 95 DLNKGRIIFRHLENRGPTGPRPGFRRR Sbjct: 61 DLNKGRIIFRHLENRGPTGPRPGFRRR 87 >D0J5F9.1 D0J5F9_COMT2 Translation initiation factor IF-1 Length = 85 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/83 (78%), Positives = 72/83 (86%), Gaps = 2/83 (2%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEMQG V+EVLPDSRFRV LDNGH LIAYT G+M+K+ I+ILAGDKV+LE+SPY Sbjct: 1 MAKEELIEMQGSVTEVLPDSRFRVTLDNGHQLIAYTGGKMRKHHIRILAGDKVSLEMSPY 60 Query: 69 DLNKGRIIFRHLENRG--PTGPR 89 DL KGRI FRHL NRG PT PR Sbjct: 61 DLTKGRITFRHLANRGPAPTTPR 83 >D8D718.1 D8D718_COMTE Translation initiation factor IF-1 Length = 85 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/83 (78%), Positives = 72/83 (86%), Gaps = 2/83 (2%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEMQG V+EVLPDSRFRV LDNGH LIAYT G+M+K+ I+ILAGDKV+LE+SPY Sbjct: 1 MAKEELIEMQGSVTEVLPDSRFRVTLDNGHQLIAYTGGKMRKHHIRILAGDKVSLEMSPY 60 Query: 69 DLNKGRIIFRHLENRG--PTGPR 89 DL KGRI FRHL NRG PT PR Sbjct: 61 DLTKGRITFRHLANRGPAPTTPR 83 >B7X0Q2.1 B7X0Q2_COMTE Translation initiation factor IF-1 Length = 85 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/83 (78%), Positives = 72/83 (86%), Gaps = 2/83 (2%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEMQG V+EVLPDSRFRV LDNGH LIAYT G+M+K+ I+ILAGDKV+LE+SPY Sbjct: 1 MAKEELIEMQGSVTEVLPDSRFRVTLDNGHQLIAYTGGKMRKHHIRILAGDKVSLEMSPY 60 Query: 69 DLNKGRIIFRHLENRG--PTGPR 89 DL KGRI FRHL NRG PT PR Sbjct: 61 DLTKGRITFRHLANRGPAPTTPR 83 >Q5P6C0.1 IF11_AROAE Translation initiation factor IF-1 1 Length = 85 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/81 (76%), Positives = 72/81 (88%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEM G V EVLPDSRFRV LDNGH+L+AY+AG+M+K+ I+IL GDKV+LELSPY Sbjct: 1 MAKEELIEMSGMVVEVLPDSRFRVTLDNGHNLVAYSAGKMRKHHIRILCGDKVSLELSPY 60 Query: 69 DLNKGRIIFRHLENRGPTGPR 89 DL+KGRI FRHLE RGP GP+ Sbjct: 61 DLSKGRITFRHLEGRGPLGPQ 81 >A9BU55.1 A9BU55_DELAS Translation initiation factor IF-1 Length = 87 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/87 (74%), Positives = 75/87 (86%), Gaps = 1/87 (1%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEMQG+V EVLPDSRFRV L+NGH LIAYT G+M+K+ I++LAGDKVTLE+SPY Sbjct: 1 MAKEELIEMQGRVDEVLPDSRFRVTLENGHQLIAYTGGKMRKHRIRVLAGDKVTLEMSPY 60 Query: 69 DLNKGRIIFRHLENR-GPTGPRPGFRR 94 DLNKGR+ FRH+E R G GPRP RR Sbjct: 61 DLNKGRLTFRHIEQRSGAPGPRPPQRR 87 >F0QD10.1 F0QD10_ACIAP Translation initiation factor IF-1 Length = 84 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/85 (76%), Positives = 72/85 (84%), Gaps = 1/85 (1%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEMQG V+EVLPDSRFRV LDNGH LIAYT G+M+K+ I+ILAGDKV+LE+SPY Sbjct: 1 MAKEELIEMQGSVTEVLPDSRFRVTLDNGHQLIAYTGGKMRKHHIRILAGDKVSLEMSPY 60 Query: 69 DLNKGRIIFRHLENRGPTGPRPGFR 93 DL KGRI FRHL RGP GP G R Sbjct: 61 DLTKGRITFRHLPGRGP-GPSSGSR 84 >Q47IR5.1 IF12_DECAR Translation initiation factor IF-1 2 Length = 87 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/86 (73%), Positives = 74/86 (86%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEEL+EMQG V++VLPD+RFRV L+NGH LIAYT+G+MKKN I+IL GDKVTLELSPY Sbjct: 1 MAKEELLEMQGVVNDVLPDTRFRVTLENGHELIAYTSGKMKKNHIRILVGDKVTLELSPY 60 Query: 69 DLNKGRIIFRHLENRGPTGPRPGFRR 94 DL+KGRI FRH+ENRG P+ RR Sbjct: 61 DLSKGRITFRHIENRGTPNPQAQRRR 86 >B9MAB8.1 B9MAB8_ACIET Translation initiation factor IF-1 Length = 88 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 64/83 (77%), Positives = 71/83 (85%), Gaps = 1/83 (1%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEMQG V+EVLPDSRFRV LDNGH LIAYT G+M+K+ I+ILAGDKV+LE+SPY Sbjct: 1 MAKEELIEMQGSVTEVLPDSRFRVTLDNGHQLIAYTGGKMRKHHIRILAGDKVSLEMSPY 60 Query: 69 DLNKGRIIFRHLENRGPTGPRPG 91 DL KGRI FRHL RGP GP G Sbjct: 61 DLTKGRITFRHLAGRGP-GPGTG 82 >A1W6I6.1 IF12_ACISJ Translation initiation factor IF-1 2 Length = 88 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 64/83 (77%), Positives = 71/83 (85%), Gaps = 1/83 (1%) Query: 9 MAKEELIEMQGQVSEVLPDSRFRVALDNGHSLIAYTAGRMKKNFIKILAGDKVTLELSPY 68 MAKEELIEMQG V+EVLPDSRFRV LDNGH LIAYT G+M+K+ I+ILAGDKV+LE+SPY Sbjct: 1 MAKEELIEMQGSVTEVLPDSRFRVTLDNGHQLIAYTGGKMRKHHIRILAGDKVSLEMSPY 60 Query: 69 DLNKGRIIFRHLENRGPTGPRPG 91 DL KGRI FRHL RGP GP G Sbjct: 61 DLTKGRITFRHLAGRGP-GPGTG 82