BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0116.p         (57 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IW91.1 D8IW91_HERSS 50S ribosomal protein L21                       118   3e-25
A6T2D7.1 RL21_JANMA 50S ribosomal protein L21                         109   1e-22
C3XBC3.1 C3XBC3_OXAFO 50S ribosomal protein L21                       108   4e-22
A4G8R6.2 RL21_HERAR 50S ribosomal protein L21                         107   4e-22
F1VY68.1 F1VY68_9BURK LSU ribosomal protein L21p                      105   3e-21
Q46X15.1 RL21_CUPPJ 50S ribosomal protein L21                         102   1e-20
C3X548.1 C3X548_OXAFO 50S ribosomal protein L21                       101   4e-20
Q1LIP8.1 RL21_RALME 50S ribosomal protein L21                         100   9e-20
A2SD34.1 RL21_METPP 50S ribosomal protein L21                         100   1e-19
B3R8A0.1 RL21_CUPTR 50S ribosomal protein L21                          99   2e-19

>D8IW91.1 D8IW91_HERSS 50S ribosomal protein L21
          Length = 103

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/57 (100%), Positives = 57/57 (100%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA
Sbjct: 47  VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 103


>A6T2D7.1 RL21_JANMA 50S ribosomal protein L21
          Length = 103

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 54/57 (94%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           +KFGAPLVAGATVLATVV+ GRHDKV+IFKMRRRKHYQK QGHRQNYTELQIVSIN 
Sbjct: 47  IKFGAPLVAGATVLATVVSHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELQIVSING 103


>C3XBC3.1 C3XBC3_OXAFO 50S ribosomal protein L21
          Length = 103

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 54/57 (94%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           ++FGAPLV GA V ATVVAQGRHDKV+IFKMRRRKHYQKRQGHRQNYTELQIVSINA
Sbjct: 47  IRFGAPLVDGAKVQATVVAQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELQIVSINA 103


>A4G8R6.2 RL21_HERAR 50S ribosomal protein L21
          Length = 103

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 50/57 (87%), Positives = 53/57 (92%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           +KFGAPLV GATVLATVV+ GRHDKV+IFKMRRRKHYQK QGHRQNYTELQIVSIN 
Sbjct: 47  IKFGAPLVEGATVLATVVSHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELQIVSING 103


>F1VY68.1 F1VY68_9BURK LSU ribosomal protein L21p
          Length = 103

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 52/57 (91%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           +KFGAPLV GATVL TV++ GRHDKV+IFKMRRRKHYQK QGHRQNYTELQIVSIN 
Sbjct: 47  IKFGAPLVEGATVLVTVLSHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELQIVSING 103


>Q46X15.1 RL21_CUPPJ 50S ribosomal protein L21
          Length = 103

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 54/57 (94%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           +KFG PLV+GA+V ATV++QGRHDKV+IFKMRRRKHYQKRQGHRQNYTEL+I +INA
Sbjct: 47  IKFGTPLVSGASVKATVISQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELRIEAINA 103


>C3X548.1 C3X548_OXAFO 50S ribosomal protein L21
          Length = 126

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 52/57 (91%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           ++FG PLV GA V ATVVAQGRH KV+IFKMRRRKHYQKRQGHRQNYTELQIV+INA
Sbjct: 70  IRFGTPLVDGAQVQATVVAQGRHKKVKIFKMRRRKHYQKRQGHRQNYTELQIVAINA 126


>Q1LIP8.1 RL21_RALME 50S ribosomal protein L21
          Length = 103

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 53/57 (92%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           +KFG PLV+GA+V ATV+AQGRHDKV+IFKMRRRKHYQKRQGHRQNYTEL+I +I A
Sbjct: 47  IKFGTPLVSGASVKATVIAQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELRIEAIVA 103


>A2SD34.1 RL21_METPP 50S ribosomal protein L21
          Length = 103

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 51/57 (89%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           +K G PLVAGATV ATVVA GRHDKVRIFKMRRRKHYQKRQGHRQN+TEL+I ++N 
Sbjct: 47  LKVGTPLVAGATVKATVVAHGRHDKVRIFKMRRRKHYQKRQGHRQNFTELEISTVNG 103


>B3R8A0.1 RL21_CUPTR 50S ribosomal protein L21
          Length = 103

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 53/57 (92%)

Query: 1   VKFGAPLVAGATVLATVVAQGRHDKVRIFKMRRRKHYQKRQGHRQNYTELQIVSINA 57
           +KFG PLV+GA+V ATV++QGRHDKV+IFKMRRRKHYQKRQGHRQNYTEL+I +I A
Sbjct: 47  IKFGTPLVSGASVKATVISQGRHDKVKIFKMRRRKHYQKRQGHRQNYTELRIEAIVA 103