BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0070.p (89 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IX61.1 D8IX61_HERSS Transcription regulator protein 176 7e-43 F0Q8K8.1 F0Q8K8_ACIAP Helix-turn-helix domain protein 100 6e-20 B5S5Z3.1 B5S5Z3_RALSO Putative uncharacterized protein hipB 100 9e-20 A3RZZ6.1 A3RZZ6_RALSO Putative uncharacterized protein 100 9e-20 E5U511.1 E5U511_ALCXX Putative uncharacterized protein 100 1e-19 Q8XQH3.1 Q8XQH3_RALSO Putative transcription regulator protein 99 1e-19 D8N1V3.1 D8N1V3_RALSO DNA-binding transcriptional regulator 99 2e-19 D8P5J0.1 D8P5J0_RALSO DNA-binding transcriptional regulator 99 3e-19 A2SL45.1 A2SL45_METPP Putative transcription regulator protein 98 3e-19 D8NEE2.1 D8NEE2_RALSO DNA-binding transcriptional regulator 98 4e-19 >D8IX61.1 D8IX61_HERSS Transcription regulator protein Length = 89 Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL Sbjct: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 Query: 61 NILGVELVLRKIEAAPSDALASPSDTPQW 89 NILGVELVLRKIEAAPSDALASPSDTPQW Sbjct: 61 NILGVELVLRKIEAAPSDALASPSDTPQW 89 >F0Q8K8.1 F0Q8K8_ACIAP Helix-turn-helix domain protein Length = 92 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 3/92 (3%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M F VRT QLP LLQA+RKQSGLTQS+VA RLGVTQQ S+LERNA + A RL++LL Sbjct: 1 MPGFTVRTADQLPALLQAFRKQSGLTQSDVALRLGVTQQTYSALERNAGNMGAARLLQLL 60 Query: 61 NILGVELVLRKIEAAPS---DALASPSDTPQW 89 ++LGVE+VL APS ++L TP W Sbjct: 61 SVLGVEMVLDNSAPAPSPSPESLRVAGGTPNW 92 >B5S5Z3.1 B5S5Z3_RALSO Putative uncharacterized protein hipB Length = 88 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 52/89 (58%), Positives = 69/89 (77%), Gaps = 1/89 (1%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M+EF VRT QLP +L+ +RKQ+GL+Q+E+A R+G+ QQ LS+LERNA+ VSA RL+ LL Sbjct: 1 MNEFIVRTPEQLPAILKGFRKQAGLSQAELAARMGMRQQTLSALERNAENVSAGRLMRLL 60 Query: 61 NILGVELVLRKIEAAPSDALASPSDTPQW 89 ++LGVELVLRK +AA + SD PQW Sbjct: 61 SVLGVELVLRKPDAAGEPGRPA-SDQPQW 88 >A3RZZ6.1 A3RZZ6_RALSO Putative uncharacterized protein Length = 88 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 52/89 (58%), Positives = 69/89 (77%), Gaps = 1/89 (1%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M+EF VRT QLP +L+ +RKQ+GL+Q+E+A R+G+ QQ LS+LERNA+ VSA RL+ LL Sbjct: 1 MNEFIVRTPEQLPAILKGFRKQAGLSQAELAARMGMRQQTLSALERNAENVSAGRLMRLL 60 Query: 61 NILGVELVLRKIEAAPSDALASPSDTPQW 89 ++LGVELVLRK +AA + SD PQW Sbjct: 61 SVLGVELVLRKPDAAGEPGRPA-SDQPQW 88 >E5U511.1 E5U511_ALCXX Putative uncharacterized protein Length = 86 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 4/82 (4%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M+++ VRT QLP LLQA+RK++GLTQ+ A RLG+TQQ LS+LERNA+KV A+RL++LL Sbjct: 1 MADYTVRTAEQLPALLQAFRKKAGLTQAAAALRLGITQQTLSALERNAEKVGADRLLQLL 60 Query: 61 NILGVELVLRKIEAAPSDALAS 82 +ILGVELVLR+ P + LAS Sbjct: 61 SILGVELVLRE----PEEPLAS 78 >Q8XQH3.1 Q8XQH3_RALSO Putative transcription regulator protein Length = 88 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/89 (57%), Positives = 69/89 (77%), Gaps = 1/89 (1%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M+EF VRT QLP +L+ +RKQ+GL+Q+E+A R+G+ QQ LS+LERNA+ VSA RL+ LL Sbjct: 1 MNEFIVRTPEQLPAMLKGFRKQAGLSQAELAARMGMRQQTLSALERNAENVSAGRLMRLL 60 Query: 61 NILGVELVLRKIEAAPSDALASPSDTPQW 89 ++LGVELVLRK +A+ + SD PQW Sbjct: 61 SVLGVELVLRKPDASGEQGRPA-SDQPQW 88 >D8N1V3.1 D8N1V3_RALSO DNA-binding transcriptional regulator Length = 88 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/89 (57%), Positives = 69/89 (77%), Gaps = 1/89 (1%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M+EF VRT QLP +L+ +RKQ+GL+Q+E+A R+G+ QQ LS+LERNA+ VSA RL+ LL Sbjct: 1 MNEFIVRTPEQLPAILKGFRKQAGLSQAELAARMGMRQQTLSALERNAENVSAGRLMRLL 60 Query: 61 NILGVELVLRKIEAAPSDALASPSDTPQW 89 ++LGVELVLRK +A+ + SD PQW Sbjct: 61 SVLGVELVLRKPDASGERGRPA-SDQPQW 88 >D8P5J0.1 D8P5J0_RALSO DNA-binding transcriptional regulator Length = 88 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 9/93 (9%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M+EF VRT QLP +L+ +RKQ+GL+Q+E+A R+G+ QQ LS+LERNA+ VSA RL+ LL Sbjct: 1 MNEFIVRTPEQLPAILKGFRKQAGLSQAELATRMGMRQQTLSALERNAENVSAARLMRLL 60 Query: 61 NILGVELVLRKIEAAPSDALASP----SDTPQW 89 ++LGVELVLRK P DA P SD PQW Sbjct: 61 SVLGVELVLRK----PDDA-GEPGRPASDQPQW 88 >A2SL45.1 A2SL45_METPP Putative transcription regulator protein Length = 94 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 11/97 (11%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M EFPVRT QLP LLQ++RK +GLTQ+++A RLGVTQQ LS+LERNA VSA RL++LL Sbjct: 1 MDEFPVRTADQLPGLLQSFRKAAGLTQADLAARLGVTQQTLSALERNAGTVSAARLMKLL 60 Query: 61 NILGVELVLRKIEAAPSDALASP--------SDTPQW 89 +IL VELVLR+ S ASP S+ QW Sbjct: 61 SILDVELVLRQQR---SSGAASPKAGGVPGGSEKAQW 94 >D8NEE2.1 D8NEE2_RALSO DNA-binding transcriptional regulator Length = 88 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 50/89 (56%), Positives = 69/89 (77%), Gaps = 1/89 (1%) Query: 1 MSEFPVRTGRQLPELLQAYRKQSGLTQSEVARRLGVTQQNLSSLERNADKVSAERLIELL 60 M+EF VRT QLP +L+ +RKQ+GL+Q+E+A R+G+ QQ LS+LERNA+ VSA RL+ LL Sbjct: 1 MNEFIVRTPEQLPAMLKGFRKQAGLSQAELAARMGMRQQTLSALERNAENVSAGRLMRLL 60 Query: 61 NILGVELVLRKIEAAPSDALASPSDTPQW 89 ++LGVELVLRK +A+ + +D PQW Sbjct: 61 SVLGVELVLRKPDASGEPGRPA-ADQPQW 88