BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0069.p (440 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IX62.1 D8IX62_HERSS HipA domain-containing protein 891 0.0 E5U512.1 E5U512_ALCXX HIPA protein 521 e-146 F0Q8K9.1 F0Q8K9_ACIAP HipA N-terminal domain protein 515 e-144 B5S5Z4.1 B5S5Z4_RALSO Hipa protein 498 e-139 B5SBB2.1 B5SBB2_RALSO Hipa protein 498 e-138 A3RZZ7.1 A3RZZ7_RALSO HIPA protein 497 e-138 D8P5J1.1 D8P5J1_RALSO Transcriptional repressor which interacts ... 494 e-137 D8NEE3.1 D8NEE3_RALSO Transcriptional repressor which interacts ... 491 e-137 D8N1V4.1 D8N1V4_RALSO Transcriptional repressor which interacts ... 486 e-135 A2SL44.1 A2SL44_METPP Putative regulatory protein 483 e-134 >D8IX62.1 D8IX62_HERSS HipA domain-containing protein Length = 455 Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/440 (99%), Positives = 438/440 (99%) Query: 1 MNGSFVGTWALTAQGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLLP 60 MNGSFVGTWALTAQGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLLP Sbjct: 16 MNGSFVGTWALTAQGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLLP 75 Query: 61 DSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLREREV 120 DSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLREREV Sbjct: 76 DSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLREREV 135 Query: 121 AELLRQTMEPTPLALTQGEELRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLPMGL 180 AELLRQTMEPTPLALTQGEELRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLPMGL Sbjct: 136 AELLRQTMEPTPLALTQGEELRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLPMGL 195 Query: 181 VGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPASGQ 240 VGGLQLDLRHSVENEWLCSRILAAYGMPVAACDI CFEDQKVLAVERFDRRWSRDPASGQ Sbjct: 196 VGGLQLDLRHSVENEWLCSRILAAYGMPVAACDIFCFEDQKVLAVERFDRRWSRDPASGQ 255 Query: 241 AMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLLFWM 300 MLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLLFWM Sbjct: 256 TMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLLFWM 315 Query: 301 LWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAKNAH 360 LWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAKNAH Sbjct: 316 LWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAKNAH 375 Query: 361 RKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSELAA 420 RKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSELAA Sbjct: 376 RKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSELAA 435 Query: 421 SILDGLRRSASSLLSFVQTA 440 SILDGLRRSASSLLSFVQTA Sbjct: 436 SILDGLRRSASSLLSFVQTA 455 >E5U512.1 E5U512_ALCXX HIPA protein Length = 451 Score = 521 bits (1343), Expect = e-146, Method: Compositional matrix adjust. Identities = 264/437 (60%), Positives = 318/437 (72%), Gaps = 5/437 (1%) Query: 1 MNGSFVGTWALTAQ-GDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLL 59 MNG VGTW++ + GD LQY WV + GRPLSLSLPF PGNPPHRG VR YFENLL Sbjct: 14 MNGVMVGTWSVQPRAGDILQYADAWVSADQGRPLSLSLPFTPGNPPHRGVAVRTYFENLL 73 Query: 60 PDSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLRERE 119 PDS+ IRER+ARR+ A TDAF LL E GRDC GALQ+LP P+ + ++A PL E E Sbjct: 74 PDSRQIRERVARRFHATATDAFTLLAEVGRDCAGALQVLPDATPPQDARVLNATPLSEAE 133 Query: 120 VAELLRQTMEPTPLA---LTQGEELRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKL 176 VA++LR T+ PTP ++ R+SIAGAQEKTALL + +WCLPHGATPT+HILK+ Sbjct: 134 VAQVLRNTLAPTPFGGAGAVDTDDFRISIAGAQEKTALLWFDGRWCLPHGATPTSHILKM 193 Query: 177 PMGLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDP 236 P+G VG LQ D+ SVENEWLCS IL AYG+PVA L FED KVLAVERFDRRW+R Sbjct: 194 PLGRVGNLQYDMSESVENEWLCSEILRAYGLPVARTQPLLFEDMKVLAVERFDRRWARR- 252 Query: 237 ASGQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQL 296 ++GQ LLRLPQEDMCQATG P LKYEADGGPGM IM LL ++DP RR FF+AQ+ Sbjct: 253 STGQPGLLRLPQEDMCQATGTPPHLKYEADGGPGMGLIMRLLSTSLDPDRDRRIFFQAQV 312 Query: 297 LFWMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRA 356 +FWML ATDGHAKNFS+FL+ GG YE PLYDVLS +P++G +LSP +A MAMAVR Sbjct: 313 IFWMLRATDGHAKNFSIFLRPGGAYELAPLYDVLSAYPVMGARANQLSPFKARMAMAVRT 372 Query: 357 KNAHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPS 416 +N H KM+DI RHW+ALG+ G+V +G ++++L +TEQVI V +P GFP Sbjct: 373 RNPHWKMQDIQRRHWLALGAEHGVVTPDGRDARFVIDDLVARTEQVIRTVSELIPTGFPE 432 Query: 417 ELAASILDGLRRSASSL 433 LA SIL GL+ +A L Sbjct: 433 ALADSILGGLQAAAEKL 449 >F0Q8K9.1 F0Q8K9_ACIAP HipA N-terminal domain protein Length = 454 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 264/435 (60%), Positives = 317/435 (72%), Gaps = 3/435 (0%) Query: 1 MNGSFVGTWALTAQG-DSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLL 59 MNG+FVGTW L+ D+LQYD W S GR LSLSLPF PGN PHRG VR YFENLL Sbjct: 14 MNGAFVGTWHLSPNAPDTLQYDTAWTRSEQGRALSLSLPFTPGNAPHRGPQVRTYFENLL 73 Query: 60 PDSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLRERE 119 PDS+ IRER+ARRY+ TDAF LL E GRDCVGAL+ILP ++A PL E + Sbjct: 74 PDSRDIRERIARRYRTGTTDAFDLLAEIGRDCVGALEILPADQASAGIVPLEAEPLNESQ 133 Query: 120 VAELLRQTMEPTPLALT-QGEELRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLPM 178 VA++LR T L + ++ R+SIAGAQEKTALL + QW LP +TPTTHILKLP+ Sbjct: 134 VAQILRGTTATNILGMVGSDDDFRISIAGAQEKTALLHHDGQWHLPRASTPTTHILKLPL 193 Query: 179 GLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPAS 238 GL+GGL++D+R SVENEWLCS IL +G+PVA C++L FED K LAVERFDR W PA Sbjct: 194 GLIGGLKIDMRDSVENEWLCSLILREFGLPVAVCELLQFEDMKALAVERFDRAWWNSPA- 252 Query: 239 GQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLLF 298 G L+RLPQEDMCQATG P KYEADGGPGM I+ LL G++ RR FF+AQ+LF Sbjct: 253 GDRRLVRLPQEDMCQATGTHPDAKYEADGGPGMDRILDLLAGSVTREHDRRTFFQAQVLF 312 Query: 299 WMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAKN 358 WML ATDGHAKNFSL + GGRY+ TPLYDVLS +P++GE PGKLSP +A MAMAVR+KN Sbjct: 313 WMLCATDGHAKNFSLHQRPGGRYQLTPLYDVLSAWPVLGEEPGKLSPFKARMAMAVRSKN 372 Query: 359 AHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSEL 418 AH KM+DIL RHW+ALG+ GIV ++G IL++L +T QVIA V+ LP FP ++ Sbjct: 373 AHWKMRDILRRHWLALGARHGIVTDDGREVAFILDDLTARTPQVIAAVRTKLPVDFPEQV 432 Query: 419 AASILDGLRRSASSL 433 A SIL GL+ +A L Sbjct: 433 ADSILGGLQNAAHRL 447 >B5S5Z4.1 B5S5Z4_RALSO Hipa protein Length = 435 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 258/436 (59%), Positives = 307/436 (70%), Gaps = 6/436 (1%) Query: 1 MNGSFVGTWALTA-QGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLL 59 MNG+ VG W L QGD L+Y A WV + GRPLSLSLPF P N PH+G VR YFENLL Sbjct: 1 MNGTHVGRWELHPHQGDVLKYAASWVAAPEGRPLSLSLPFTPDNAPHKGPAVRAYFENLL 60 Query: 60 PDSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLRERE 119 PDS+ IRER+ARR+QA T+AF LL + GRDC+GALQ+LP P + IDA PL E + Sbjct: 61 PDSRDIRERIARRFQAGTTEAFDLLEQIGRDCIGALQVLPADMAPPATGDIDAEPLTEAQ 120 Query: 120 VAELLRQTMEPTPLALTQGEE--LRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLP 177 +A+ LR+T+ P PL ++ R+SIAGAQEKTA L+ W P GATPT+HI KLP Sbjct: 121 IAQTLRETVAPPPLGGMPEDDGHFRISIAGAQEKTAFLQIDGHWYRPRGATPTSHIFKLP 180 Query: 178 MGLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPA 237 MGLVG +QLDL SVENEWLC+ +L AYG+PVA C L FEDQKVLAVERFDR W Sbjct: 181 MGLVGNMQLDLSESVENEWLCALVLRAYGLPVAHCRPLVFEDQKVLAVERFDRMWWD--- 237 Query: 238 SGQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLL 297 G L+RLPQEDMCQAT P LKYEADGGPG+ IM LL G+ A R F++Q+L Sbjct: 238 RGGKRLIRLPQEDMCQATATPPHLKYEADGGPGIDRIMGLLDGSAHREADRLTLFRSQVL 297 Query: 298 FWMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAK 357 FWML A DGHAKNFSL L+ GG Y TPLYDV+S +PL+GEGPGKLSPHR +AMAVR+K Sbjct: 298 FWMLRAPDGHAKNFSLALRPGGAYALTPLYDVMSAYPLLGEGPGKLSPHRIRLAMAVRSK 357 Query: 358 NAHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSE 417 NAH KM+DI RHW+ LG +GIV +G +I++ L +T +V V+A LP GFP Sbjct: 358 NAHWKMQDIQRRHWLGLGQRYGIVTSDGADAASIVDNLVARTPEVTRTVRAMLPEGFPQP 417 Query: 418 LAASILDGLRRSASSL 433 LA IL GLR +A L Sbjct: 418 LADRILQGLRHAADKL 433 >B5SBB2.1 B5SBB2_RALSO Hipa protein Length = 435 Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust. Identities = 257/436 (58%), Positives = 307/436 (70%), Gaps = 6/436 (1%) Query: 1 MNGSFVGTWALTA-QGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLL 59 MNG+ VG W L QGD L+Y A WV + GRPLSLSLPF P N PH+G VR YFENLL Sbjct: 1 MNGTHVGRWELHPHQGDVLKYAASWVAAPEGRPLSLSLPFTPDNAPHKGPAVRAYFENLL 60 Query: 60 PDSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLRERE 119 PDS+ IRER+ARR+QA T+AF LL + GRDC+GALQ+LP P + IDA PL E + Sbjct: 61 PDSRDIRERIARRFQAGTTEAFDLLEQIGRDCIGALQVLPADMAPPATGDIDAEPLTEAQ 120 Query: 120 VAELLRQTMEPTPLALTQGEE--LRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLP 177 +A+ LR+T+ P PL ++ R+SIAGAQEKTA L+ W P GATPT+HI KLP Sbjct: 121 IAQTLRETVAPPPLGGMPEDDGHFRISIAGAQEKTAFLQIDGHWYRPRGATPTSHIFKLP 180 Query: 178 MGLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPA 237 MGLVG ++LDL SVENEWLC+ +L AYG+PVA C L FEDQKVLAVERFDR W Sbjct: 181 MGLVGNMKLDLSESVENEWLCALVLRAYGLPVAHCRPLVFEDQKVLAVERFDRMWWD--- 237 Query: 238 SGQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLL 297 G L+RLPQEDMCQAT P LKYEADGGPG+ IM LL G+ A R F++Q+L Sbjct: 238 RGGKRLIRLPQEDMCQATATPPHLKYEADGGPGIDRIMGLLDGSAHREADRLTLFRSQVL 297 Query: 298 FWMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAK 357 FWML A DGHAKNFSL L+ GG Y TPLYDV+S +PL+GEGPGKLSPHR +AMAVR+K Sbjct: 298 FWMLCAPDGHAKNFSLALRPGGAYALTPLYDVMSAYPLLGEGPGKLSPHRIRLAMAVRSK 357 Query: 358 NAHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSE 417 NAH KM+DI RHW+ LG +GIV +G +I++ L +T +V V+A LP GFP Sbjct: 358 NAHWKMQDIQRRHWLGLGQRYGIVTSDGADAASIVDNLVARTPEVTRTVRAMLPEGFPQP 417 Query: 418 LAASILDGLRRSASSL 433 LA IL GLR +A L Sbjct: 418 LAERILQGLRHAADKL 433 >A3RZZ7.1 A3RZZ7_RALSO HIPA protein Length = 448 Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust. Identities = 257/436 (58%), Positives = 307/436 (70%), Gaps = 6/436 (1%) Query: 1 MNGSFVGTWALTA-QGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLL 59 MNG+ VG W L QGD L+Y A WV + GRPLSLSLPF P N PH+G VR YFENLL Sbjct: 14 MNGTHVGRWELHPHQGDVLKYAASWVAAPEGRPLSLSLPFTPDNAPHKGPAVRAYFENLL 73 Query: 60 PDSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLRERE 119 PDS+ IRER+ARR+QA T+AF LL + GRDC+GALQ+LP P + IDA PL E + Sbjct: 74 PDSRDIRERIARRFQAGTTEAFDLLEQIGRDCIGALQVLPADMAPPATGDIDAEPLTEAQ 133 Query: 120 VAELLRQTMEPTPLALTQGEE--LRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLP 177 +A+ LR+T+ P PL ++ R+SIAGAQEKTA L+ W P GATPT+HI KLP Sbjct: 134 IAQTLRETVAPPPLGGMPEDDGHFRISIAGAQEKTAFLQIDGHWYRPRGATPTSHIFKLP 193 Query: 178 MGLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPA 237 MGLVG ++LDL SVENEWLC+ +L AYG+PVA C L FEDQKVLAVERFDR W Sbjct: 194 MGLVGNMKLDLSESVENEWLCALVLRAYGLPVAHCRPLVFEDQKVLAVERFDRMWW---D 250 Query: 238 SGQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLL 297 G L+RLPQEDMCQAT P LKYEADGGPG+ IM LL G+ A R F++Q+L Sbjct: 251 RGGKRLIRLPQEDMCQATATPPHLKYEADGGPGIDRIMGLLDGSAHREADRLTLFRSQVL 310 Query: 298 FWMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAK 357 FWML A DGHAKNFSL L+ GG Y TPLYDV+S +PL+GEGPGKLSPHR +AMAVR+K Sbjct: 311 FWMLCAPDGHAKNFSLALRPGGAYALTPLYDVMSAYPLLGEGPGKLSPHRIRLAMAVRSK 370 Query: 358 NAHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSE 417 NAH KM+DI RHW+ LG +GIV +G +I++ L +T +V V+A LP GFP Sbjct: 371 NAHWKMQDIQRRHWLGLGQRYGIVTSDGADAASIVDNLVARTPEVTRTVRAMLPEGFPQP 430 Query: 418 LAASILDGLRRSASSL 433 LA IL GLR +A L Sbjct: 431 LAERILQGLRHAADKL 446 >D8P5J1.1 D8P5J1_RALSO Transcriptional repressor which interacts with HipB Length = 448 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 255/436 (58%), Positives = 309/436 (70%), Gaps = 6/436 (1%) Query: 1 MNGSFVGTWALTA-QGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLL 59 MNG+ VG W L QGD L+Y A WV + GRPLSLSLPF P N PH+G VR YFENLL Sbjct: 14 MNGTHVGRWELHPHQGDVLKYAASWVAAPEGRPLSLSLPFTPDNAPHKGPAVRAYFENLL 73 Query: 60 PDSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLRERE 119 PDS+ IRER+ARR+QA T+AF LL + GRDC+GALQ+LP P + +DA PL E + Sbjct: 74 PDSRDIRERIARRFQAGTTEAFDLLEQIGRDCIGALQVLPADMAPPATGDLDAEPLTEAQ 133 Query: 120 VAELLRQTMEPTPLALTQGEE--LRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLP 177 +A+ LR+T+ P PL ++ R+SIAGAQEKTA L+ +W P GATPT+HI KLP Sbjct: 134 IAQTLRETVAPPPLGGMPEDDGHFRISIAGAQEKTAFLQIDGRWYRPRGATPTSHIFKLP 193 Query: 178 MGLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPA 237 MGLVG +QLDL SVENEWLC+ +L AYG+PVA C L FEDQKVLAVERFDR W Sbjct: 194 MGLVGNMQLDLSESVENEWLCALVLRAYGLPVAHCRPLVFEDQKVLAVERFDRMWW---D 250 Query: 238 SGQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLL 297 G L+RLPQEDMCQAT P LKYEADGGPG+ IM+LL G+ A R F++Q+L Sbjct: 251 RGGKRLIRLPQEDMCQATATPPHLKYEADGGPGIDRIMSLLDGSAHREADRLTLFRSQVL 310 Query: 298 FWMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAK 357 FWML A DGHAKNFSL L+ GG Y TPLYDV+S +PL+GEGPGKLS HR +AMAVR+K Sbjct: 311 FWMLRAPDGHAKNFSLALRPGGAYALTPLYDVMSAYPLLGEGPGKLSAHRIRLAMAVRSK 370 Query: 358 NAHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSE 417 NAH KM+DI RHW+ LG +G+V +G +I++ L +T +VI V+A LP GFP Sbjct: 371 NAHWKMQDIQRRHWLGLGQRYGLVTSDGADAASIVDNLVTRTPEVIRTVRAMLPEGFPQP 430 Query: 418 LAASILDGLRRSASSL 433 LA IL GL+ +A L Sbjct: 431 LADRILQGLQHAADKL 446 >D8NEE3.1 D8NEE3_RALSO Transcriptional repressor which interacts with HipB Length = 449 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 253/436 (58%), Positives = 311/436 (71%), Gaps = 5/436 (1%) Query: 1 MNGSFVGTWALTA-QGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLL 59 MNG+ VG W L QGD L+Y A WV + GRPLSLSLPF P N P+RG VR YFENLL Sbjct: 14 MNGTHVGHWELHPHQGDVLKYAASWVAAPEGRPLSLSLPFTPDNAPYRGPAVRAYFENLL 73 Query: 60 PDSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLRERE 119 PDS+ IRER+ARR+QA T+AF LL + GRDC+GALQ+LP P IDA PL + + Sbjct: 74 PDSRDIRERIARRFQAGTTEAFDLLEQIGRDCIGALQVLPADMAPTGIGDIDAEPLTDAQ 133 Query: 120 VAELLRQTMEPTPLALTQGEE--LRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLP 177 +A+ LR+T+ P PL ++ R+SIAGAQEKTA LR ++W P GATPT+HI KLP Sbjct: 134 IAQTLRETVAPPPLGGMPEDDGHFRISIAGAQEKTAFLRIGERWYRPRGATPTSHIFKLP 193 Query: 178 MGLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPA 237 MGLVG ++LDL SVENEWLC+++L AYG+P+A C L FEDQKVLAVERFDR W Sbjct: 194 MGLVGNMKLDLSESVENEWLCAQVLRAYGLPIAHCRPLVFEDQKVLAVERFDRLWQDH-- 251 Query: 238 SGQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLL 297 G+ L+RLPQED+CQAT P LKYEADGGPG+ IM LL G+ A R F++Q+L Sbjct: 252 GGRQRLIRLPQEDLCQATATPPHLKYEADGGPGIDRIMGLLDGSARRDADRLMLFRSQVL 311 Query: 298 FWMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAK 357 FWML A DGHAKNFSL L+ GG Y TPLYDV+S +PL+GEGPG+LSPH+ +AMAVR+K Sbjct: 312 FWMLCAPDGHAKNFSLALRPGGAYALTPLYDVMSAYPLLGEGPGRLSPHKIRLAMAVRSK 371 Query: 358 NAHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSE 417 NAH K++DI RHW+ALG GIV +G AI++ L +T +V+ V+A LP GFP Sbjct: 372 NAHWKVQDIQRRHWLALGQRHGIVTPDGGEAAAIVDSLVARTPEVVRTVRAALPDGFPQP 431 Query: 418 LAASILDGLRRSASSL 433 LA IL GL+ +A L Sbjct: 432 LADRILQGLQSAADRL 447 >D8N1V4.1 D8N1V4_RALSO Transcriptional repressor which interacts with HipB Length = 448 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 255/436 (58%), Positives = 306/436 (70%), Gaps = 6/436 (1%) Query: 1 MNGSFVGTWALTA-QGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLL 59 MNG+ VG W L QGD L+Y A WV + GRPLSLSLPF P N P++G VR YFENLL Sbjct: 14 MNGTHVGHWELHPHQGDVLKYAASWVAAPEGRPLSLSLPFTPDNAPYKGPAVRAYFENLL 73 Query: 60 PDSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLRERE 119 PDS+ IRER+ARR+QA T+AF LL + GRDC+GALQ+LP P IDA PL E + Sbjct: 74 PDSRDIRERIARRFQAGTTEAFDLLEQIGRDCIGALQVLPADMAPASIGDIDAEPLTEAQ 133 Query: 120 VAELLRQTMEPTPLALTQGEE--LRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLP 177 +A+ LR+T+ P PL ++ R+SIAGAQEKTA L+ ++W P GATPT+HI KLP Sbjct: 134 IAQTLRETVAPPPLGGMPEDDGNFRISIAGAQEKTAFLQIDERWYRPRGATPTSHIFKLP 193 Query: 178 MGLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPA 237 MG VG ++LDL SVENEWLCS +L AYG+P+A C L FEDQKVLAVERFDR W RD Sbjct: 194 MGRVGNMKLDLSESVENEWLCSLVLRAYGLPIAHCQPLVFEDQKVLAVERFDRMW-RDHR 252 Query: 238 SGQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLL 297 Q L+RLPQEDMCQAT P LKYEADGGPG+ IM LL G+ A R F++Q+L Sbjct: 253 GRQ--LIRLPQEDMCQATATPPHLKYEADGGPGIDRIMGLLDGSARRDADRLMLFQSQVL 310 Query: 298 FWMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAK 357 FWML A DGHAKNFSL L+ GG Y TPLYDV+S +PL+GEGPGKLSPHR +AMAVR+K Sbjct: 311 FWMLCAPDGHAKNFSLALRPGGAYALTPLYDVMSAYPLLGEGPGKLSPHRIRLAMAVRSK 370 Query: 358 NAHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSE 417 N H KM+D+ RHW+ LG GIV G AI++ L +T +VI V+A LP FP Sbjct: 371 NPHWKMQDVQRRHWLGLGQRHGIVTPEGGHAAAIVDSLVARTPEVIRTVRARLPEDFPQP 430 Query: 418 LAASILDGLRRSASSL 433 LA IL GL+ +A L Sbjct: 431 LADRILRGLQSAADRL 446 >A2SL44.1 A2SL44_METPP Putative regulatory protein Length = 450 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 244/435 (56%), Positives = 307/435 (70%), Gaps = 6/435 (1%) Query: 1 MNGSFVGTWALTAQGDSLQYDARWVVSASGRPLSLSLPFRPGNPPHRGDLVRHYFENLLP 60 MNG VG W+ + GD L+YDA W+ S RPLSLSLPFRPGNPPH+G+ VR YFENLLP Sbjct: 14 MNGERVGAWSTSPAGDELRYDAGWLRSPQVRPLSLSLPFRPGNPPHKGNAVRDYFENLLP 73 Query: 61 DSKAIRERLARRYQAADTDAFALLGEAGRDCVGALQILPLGATPELSWTIDARPLREREV 120 DS+ IRERLARR++ A TDAF LL E GRDCVGALQILP G P T+ ARPL E V Sbjct: 74 DSRPIRERLARRFKTATTDAFDLLTEIGRDCVGALQILPDGQDPGDVKTVQARPLDEAGV 133 Query: 121 AELLRQTMEPTPL--ALTQGEELRLSIAGAQEKTALLRYLDQWCLPHGATPTTHILKLPM 178 A L + P+ +E R+SIAGAQEKTALL + +W P G TPTTHILKLP+ Sbjct: 134 ARALNAALTPSGFDQRTADADEFRISIAGAQEKTALLWHEGRWWRPMGPTPTTHILKLPL 193 Query: 179 GLVGGLQLDLRHSVENEWLCSRILAAYGMPVAACDILCFEDQKVLAVERFDRRWSRDPAS 238 GLVG ++LDLR SVENEWLC+++L AYG+PVA C L FE Q+VL VERFDR W+ D Sbjct: 194 GLVGNMKLDLRDSVENEWLCAQVLEAYGLPVARCHPLAFEGQRVLGVERFDRMWADD--- 250 Query: 239 GQAMLLRLPQEDMCQATGISPWLKYEADGGPGMKEIMALLGGAIDPVAARRHFFKAQLLF 298 A ++RLPQEDMCQATG KYEADGGPG+ I+ +L + V R +FF+AQL+F Sbjct: 251 -GAWIIRLPQEDMCQATGTPAHAKYEADGGPGIDGILEVLNASRRRVQDRENFFRAQLMF 309 Query: 299 WMLWATDGHAKNFSLFLKAGGRYEPTPLYDVLSVFPLIGEGPGKLSPHRAAMAMAVRAKN 358 W++ A DGHAKNFS+ L AGG + TPLYDV+S +P++G G ++SPHR +AMA+R N Sbjct: 310 WLMCAPDGHAKNFSIALHAGGAFSMTPLYDVVSAYPVLGNGLNRISPHRVKLAMALRCTN 369 Query: 359 AHRKMKDILPRHWMALGSHFGIVAENGDGPLAILEELAEQTEQVIAKVQADLPPGFPSEL 418 AH +M+DIL RHW A+G GIV+ +G G +++++ ++T + V A LPPGFP+ + Sbjct: 370 AHWRMRDILRRHWEAVGRRSGIVSASGQGVDGLIQDIIDRTPVALDAVAAKLPPGFPAYV 429 Query: 419 AASILDGLRRSASSL 433 A SIL G+R + L Sbjct: 430 ADSILGGIRAAVGRL 444