BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0068.p (340 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IX63.1 D8IX63_HERSS tRNA-dihydrouridine synthase EC=1.-.-.- 699 0.0 A6SUP9.1 A6SUP9_JANMA tRNA-dihydrouridine synthase EC=1.-.-.- 569 e-160 F1VW43.1 F1VW43_9BURK tRNA-dihydrouridine synthase B 557 e-157 A4G1U4.1 A4G1U4_HERAR tRNA-dihydrouridine synthase EC=1.-.-.- 521 e-146 Q0KEB8.1 Q0KEB8_CUPNH tRNA-dihydrouridine synthase EC=1.-.-.- 487 e-135 B2AH78.1 B2AH78_CUPTR tRNA-dihydrouridine synthase EC=1.-.-.- 486 e-135 B5WHS5.1 B5WHS5_9BURK tRNA-dihydrouridine synthase EC=1.-.-.- 483 e-134 D5WD29.1 D5WD29_BURSC tRNA-dihydrouridine synthase EC=1.-.-.- 482 e-134 D8NYF8.1 D8NYF8_RALSO tRNA-dihydrouridine synthase EC=1.-.-.- 481 e-134 Q475R2.1 Q475R2_CUPPJ tRNA-dihydrouridine synthase EC=1.-.-.- 481 e-134 >D8IX63.1 D8IX63_HERSS tRNA-dihydrouridine synthase EC=1.-.-.- Length = 340 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/340 (99%), Positives = 339/340 (99%) Query: 1 VNIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH 60 +NIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH Sbjct: 1 MNIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH 60 Query: 61 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL 120 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL Sbjct: 61 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL 120 Query: 121 VARILDAVVSAVDVPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYSGE 180 VARILDAVVSAVDVPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYSGE Sbjct: 121 VARILDAVVSAVDVPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYSGE 180 Query: 181 AEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREIDHF 240 AEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREIDHF Sbjct: 181 AEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREIDHF 240 Query: 241 LRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRRSM 300 LRTGEHLPAPLVSEVE LMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRRSM Sbjct: 241 LRTGEHLPAPLVSEVEQLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRRSM 300 Query: 301 NRIEDCAQQLQAVRQFFASQAAFGERLQYGLAVDEVALAA 340 NRIEDCAQQLQAVRQFFASQAAFGERLQYGLAVDEVALAA Sbjct: 301 NRIEDCAQQLQAVRQFFASQAAFGERLQYGLAVDEVALAA 340 >A6SUP9.1 A6SUP9_JANMA tRNA-dihydrouridine synthase EC=1.-.-.- Length = 338 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 268/337 (79%), Positives = 304/337 (90%) Query: 1 VNIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH 60 +NIGPYSL NNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAAS+PRLW S+K++RR NH Sbjct: 1 MNIGPYSLPNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASNPRLWASDKSTRRTNH 60 Query: 61 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL 120 DGE+EPKAVQIAGADPV+LA+CAK+NV+RGAQIIDINMGCPVKKVCNSWCGSALLQ E L Sbjct: 61 DGEVEPKAVQIAGADPVLLAECAKFNVDRGAQIIDINMGCPVKKVCNSWCGSALLQHESL 120 Query: 121 VARILDAVVSAVDVPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYSGE 180 VA IL+AVV++V+VPVTLKFRTGW+RA+KNAL IA AE +GIAMLTLHGRTRADGYSG+ Sbjct: 121 VAEILEAVVASVNVPVTLKFRTGWDRAHKNALNIARIAEQSGIAMLTLHGRTRADGYSGD 180 Query: 181 AEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREIDHF 240 AEYETI AVKAAV IPVVANGDITTPEKAR VL +T ADA+M+GRAAQGRPWIFREI+H+ Sbjct: 181 AEYETITAVKAAVSIPVVANGDITTPEKARYVLDVTGADAIMIGRAAQGRPWIFREIEHY 240 Query: 241 LRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRRSM 300 LRTG +LPAP+++EV LMDEHL+AHYAFYG+YLGVRTARKHIGWYVR+L GGE FR+ M Sbjct: 241 LRTGTYLPAPMIAEVRTLMDEHLRAHYAFYGEYLGVRTARKHIGWYVRELVGGEAFRQQM 300 Query: 301 NRIEDCAQQLQAVRQFFASQAAFGERLQYGLAVDEVA 337 N++EDC QQL AV FF Q A GERLQY +++A Sbjct: 301 NKLEDCEQQLAAVNTFFELQLAHGERLQYRPTAEKLA 337 >F1VW43.1 F1VW43_9BURK tRNA-dihydrouridine synthase B Length = 348 Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust. Identities = 274/329 (83%), Positives = 298/329 (90%) Query: 1 VNIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH 60 V +GPY L NNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAAS+PRLWQ+EKTSRRINH Sbjct: 11 VKLGPYQLANNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASNPRLWQTEKTSRRINH 70 Query: 61 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL 120 DGEM P+AVQIAGADP MLADCA++NVERGAQ+IDINMGCPVKKVCNSWCGSALLQDE L Sbjct: 71 DGEMAPRAVQIAGADPAMLADCARFNVERGAQVIDINMGCPVKKVCNSWCGSALLQDERL 130 Query: 121 VARILDAVVSAVDVPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYSGE 180 V +ILDAVV+AVDVPVTLKFRTGW+R +KNAL IA A++AGIAMLTLHGRTRADGY+G Sbjct: 131 VGQILDAVVAAVDVPVTLKFRTGWDRQHKNALNIARLAQSAGIAMLTLHGRTRADGYNGA 190 Query: 181 AEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREIDHF 240 AEYETIAAVKAAV IPVVANGDITTPEKAR VL +T ADA+M+GRAAQGRPWIFRE+ HF Sbjct: 191 AEYETIAAVKAAVTIPVVANGDITTPEKARHVLAVTGADAIMIGRAAQGRPWIFREVVHF 250 Query: 241 LRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRRSM 300 L+TG HL APLVSEV LMDEHL+AHYAFYG+YLGVRTARKHIGWYVRDL GGE FR+SM Sbjct: 251 LKTGTHLAAPLVSEVALLMDEHLRAHYAFYGEYLGVRTARKHIGWYVRDLAGGEDFRQSM 310 Query: 301 NRIEDCAQQLQAVRQFFASQAAFGERLQY 329 N +EDC QQL AV FF SQ +GERLQY Sbjct: 311 NLLEDCEQQLAAVNDFFESQIRYGERLQY 339 >A4G1U4.1 A4G1U4_HERAR tRNA-dihydrouridine synthase EC=1.-.-.- Length = 322 Score = 521 bits (1341), Expect = e-146, Method: Compositional matrix adjust. Identities = 257/313 (82%), Positives = 282/313 (90%) Query: 17 MAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINHDGEMEPKAVQIAGADP 76 MAGVTDRPFRQLCKQLGAGYAVSEMAAS+PRLW ++K++RR NHDGE+EPKAVQIAGADP Sbjct: 1 MAGVTDRPFRQLCKQLGAGYAVSEMAASNPRLWATDKSTRRTNHDGEVEPKAVQIAGADP 60 Query: 77 VMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEELVARILDAVVSAVDVPV 136 +MLA+CAK+NV+RGAQIIDINMGCPVKKVCNSWCGSALLQ E LVA IL AVV+AVDVPV Sbjct: 61 LMLAECAKFNVDRGAQIIDINMGCPVKKVCNSWCGSALLQHESLVAEILQAVVAAVDVPV 120 Query: 137 TLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYSGEAEYETIAAVKAAVKIP 196 TLKFRTGW+RA+KNAL IA AE +GIAMLTLHGRTRADGYSGEAEYE IAAVKAAV IP Sbjct: 121 TLKFRTGWDRAHKNALNIARIAEQSGIAMLTLHGRTRADGYSGEAEYEMIAAVKAAVSIP 180 Query: 197 VVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREIDHFLRTGEHLPAPLVSEVE 256 VVANGDITTPEKA+ VL T ADA+M+GRAAQGRPWIFREI H+LRTG HLPAPL+SEV Sbjct: 181 VVANGDITTPEKAKFVLEATGADAIMIGRAAQGRPWIFREIVHYLRTGTHLPAPLISEVR 240 Query: 257 HLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRRSMNRIEDCAQQLQAVRQF 316 LMDEHL+AHYAFYG+YLGVRTARKHIGWYVR+L GE FR+ MNR+EDCAQQL AV +F Sbjct: 241 TLMDEHLRAHYAFYGEYLGVRTARKHIGWYVRELIDGEAFRQQMNRLEDCAQQLAAVNEF 300 Query: 317 FASQAAFGERLQY 329 F Q GERLQY Sbjct: 301 FELQLTHGERLQY 313 >Q0KEB8.1 Q0KEB8_CUPNH tRNA-dihydrouridine synthase EC=1.-.-.- Length = 353 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 236/339 (69%), Positives = 273/339 (80%), Gaps = 5/339 (1%) Query: 1 VNIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH 60 + IGP+ LRNN+FVAPMAGVTDRPFRQLCKQLGAGYAVSEM AS+ +LW+SEKT RR NH Sbjct: 1 MQIGPHQLRNNLFVAPMAGVTDRPFRQLCKQLGAGYAVSEMVASNAQLWKSEKTMRRANH 60 Query: 61 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL 120 GE+EP AVQIAGA+P M+A+ A+YNV+RGAQIIDINMGCP KKVCN GSALLQ+E L Sbjct: 61 AGEVEPIAVQIAGAEPSMMAEAARYNVDRGAQIIDINMGCPAKKVCNVAAGSALLQNEPL 120 Query: 121 VARILDAVVSAVD--VPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYS 178 V RI+ AVV AV VPVTLK RTGWNR N+NAL+IA E AGI+MLT+HGRTRAD Y Sbjct: 121 VVRIVQAVVGAVGDRVPVTLKIRTGWNRENRNALRIAHMVEDAGISMLTIHGRTRADLYH 180 Query: 179 GEAEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREID 238 G AEYETIAAVKAAV IPVVANGDITTP+KA+ VL LT ADA+M+GRAAQGRPW+FREI+ Sbjct: 181 GNAEYETIAAVKAAVSIPVVANGDITTPQKAKQVLALTGADAIMIGRAAQGRPWLFREIE 240 Query: 239 HFLRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRR 298 HFL+TGE LP+P V+E+ +M+ HL+ HYAFYG++ GVRTARKHI WY R L G FR Sbjct: 241 HFLKTGEMLPSPEVAEIRAIMNAHLEDHYAFYGEFTGVRTARKHIAWYTRGLRGANLFRH 300 Query: 299 SMNRIEDCAQQLQAVRQFFASQAAFGERLQYGLAVDEVA 337 MN +E A+QL AV FF QA +RL Y VD+ A Sbjct: 301 RMNTLESTAEQLAAVNAFFDEQAQISDRLVY---VDDAA 336 >B2AH78.1 B2AH78_CUPTR tRNA-dihydrouridine synthase EC=1.-.-.- Length = 353 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 231/331 (69%), Positives = 272/331 (82%), Gaps = 2/331 (0%) Query: 1 VNIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH 60 + IGP+ LRNN+FVAPMAGVTDRPFRQLCKQLGAGYAVSEM AS+ +LW+SEKT RR NH Sbjct: 1 MQIGPHQLRNNLFVAPMAGVTDRPFRQLCKQLGAGYAVSEMVASNAQLWKSEKTMRRANH 60 Query: 61 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL 120 GE+EP AVQIAGA+P M+A+ A+YNV+RGAQIIDINMGCP KKVCN GSALLQ+E L Sbjct: 61 AGEVEPIAVQIAGAEPSMMAEAARYNVDRGAQIIDINMGCPAKKVCNVAAGSALLQNEPL 120 Query: 121 VARILDAVVSAVD--VPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYS 178 V RI++AVV+AV VPVTLK RTGWNR N+NAL++A + AGI+MLT+HGRTRAD Y Sbjct: 121 VVRIVEAVVAAVGDRVPVTLKIRTGWNRENRNALRVAQMVQDAGISMLTIHGRTRADLYH 180 Query: 179 GEAEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREID 238 G+AEYETIAAVKAAV IPVVANGDITTP+KA+ VL LT ADA+M+GRAAQGRPW+FREI+ Sbjct: 181 GDAEYETIAAVKAAVSIPVVANGDITTPQKAKQVLALTGADAIMIGRAAQGRPWLFREIE 240 Query: 239 HFLRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRR 298 HFL+TGE LP+P V+E+ +M+ HL+ HYAFYG++ GVRTARKHI WY R L G FR Sbjct: 241 HFLKTGEMLPSPEVAEIRAIMNAHLEDHYAFYGEFTGVRTARKHIAWYTRGLRGANLFRH 300 Query: 299 SMNRIEDCAQQLQAVRQFFASQAAFGERLQY 329 MN +E A+QL AV FF QA +RL Y Sbjct: 301 RMNTLESTAEQLAAVNAFFDEQAQISDRLVY 331 >B5WHS5.1 B5WHS5_9BURK tRNA-dihydrouridine synthase EC=1.-.-.- Length = 353 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/338 (68%), Positives = 278/338 (82%), Gaps = 8/338 (2%) Query: 3 IGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINHDG 62 +GP++LRNN+FVAPMAGVTDRPFRQLCK+LGAGYAVSEM AS+ +LW+SEKT RR NH+G Sbjct: 4 LGPHNLRNNLFVAPMAGVTDRPFRQLCKRLGAGYAVSEMVASNAQLWKSEKTMRRANHEG 63 Query: 63 EMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEELVA 122 E+EP AVQIAGADP M+A+ A+YNV GAQIIDINMGCP KKVCN GSALLQ+E LV Sbjct: 64 EVEPIAVQIAGADPDMMAEAARYNVANGAQIIDINMGCPAKKVCNVAAGSALLQNEPLVQ 123 Query: 123 RILDAVVSAVDV-----PVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGY 177 RI++AVV+AV V PVTLK RTGWNR NKNAL +A A+AAGI+MLT+HGRTRAD Y Sbjct: 124 RIVEAVVNAVGVGPDAVPVTLKIRTGWNRENKNALNVARLAQAAGISMLTVHGRTRADLY 183 Query: 178 SGEAEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREI 237 G+AEYETIAAVKAAV+IPVVANGDIT+P+KAR+VL T ADA+M+GRAAQGRPW+FREI Sbjct: 184 HGDAEYETIAAVKAAVRIPVVANGDITSPQKAREVLAATGADAIMIGRAAQGRPWLFREI 243 Query: 238 DHFLRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFR 297 +HFL+TGE LP P + E++ +M+EHL+ HYAFYG++ GVRTARKHIGWY R L G FR Sbjct: 244 EHFLQTGELLPPPRIDEIQQVMNEHLEDHYAFYGEFTGVRTARKHIGWYTRGLSGANLFR 303 Query: 298 RSMNRIEDCAQQLQAVRQFFASQAAFGERLQYGLAVDE 335 MN ++ +QL AV +FF +Q A +RL Y +DE Sbjct: 304 HRMNTLDTTREQLLAVNEFFDAQKAISDRLVY---IDE 338 >D5WD29.1 D5WD29_BURSC tRNA-dihydrouridine synthase EC=1.-.-.- Length = 358 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/338 (68%), Positives = 277/338 (81%), Gaps = 8/338 (2%) Query: 3 IGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINHDG 62 +GP++LRNN+FVAPMAGVTDRPFRQLCK+LGAGYAVSEM AS+ +LW+SEKT RR NH+G Sbjct: 4 LGPHNLRNNLFVAPMAGVTDRPFRQLCKRLGAGYAVSEMVASNAQLWKSEKTMRRANHEG 63 Query: 63 EMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEELVA 122 E+EP AVQIAGADP M+A+ A+YNV GAQIIDINMGCP KKVCN GSALLQ+E LV Sbjct: 64 EVEPIAVQIAGADPDMMAEAARYNVGNGAQIIDINMGCPAKKVCNVAAGSALLQNEPLVQ 123 Query: 123 RILDAVVSAVDV-----PVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGY 177 RI++AVV+AV V PVTLK RTGWNR NKNAL +A A+AAGI+MLT+HGRTRAD Y Sbjct: 124 RIVEAVVNAVGVGPDAVPVTLKIRTGWNRENKNALNVARLAQAAGISMLTVHGRTRADLY 183 Query: 178 SGEAEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREI 237 G+AEYETIAAVKAAV IPVVANGDIT+P+KAR+VL T ADA+M+GRAAQGRPW+FREI Sbjct: 184 HGDAEYETIAAVKAAVDIPVVANGDITSPQKAREVLAATGADAIMIGRAAQGRPWLFREI 243 Query: 238 DHFLRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFR 297 +HFL+TGE LP P + E++ +M+EHL+ HYAFYG++ GVRTARKHIGWY R L G FR Sbjct: 244 EHFLQTGELLPPPRIDEIQQVMNEHLEDHYAFYGEFTGVRTARKHIGWYTRGLSGANLFR 303 Query: 298 RSMNRIEDCAQQLQAVRQFFASQAAFGERLQYGLAVDE 335 MN ++ +QL AV +FF +Q A +RL Y VDE Sbjct: 304 HRMNTLDTTREQLLAVNEFFDAQKAISDRLVY---VDE 338 >D8NYF8.1 D8NYF8_RALSO tRNA-dihydrouridine synthase EC=1.-.-.- Length = 356 Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/331 (69%), Positives = 271/331 (81%), Gaps = 2/331 (0%) Query: 1 VNIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH 60 + IGP++LRNN+FVAPMAGVTDRPFRQLCK+LGAGYAVSEM AS+ +LW+SEKT RR NH Sbjct: 1 MQIGPHTLRNNLFVAPMAGVTDRPFRQLCKRLGAGYAVSEMVASNAQLWKSEKTMRRANH 60 Query: 61 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL 120 GE+EP AVQIAGA+P+M+A+ A+YNV+RGAQIIDINMGCP KKVCN GSALLQ+E L Sbjct: 61 TGEVEPIAVQIAGAEPMMMAEAARYNVDRGAQIIDINMGCPAKKVCNVAAGSALLQNEPL 120 Query: 121 VARILDAVVSAVD--VPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYS 178 VARI++AVV AV VPVTLK RTGW+R ++NAL +A A+ AGI+MLT+HGRTRAD Y Sbjct: 121 VARIVEAVVGAVGDRVPVTLKIRTGWDREHRNALTVARIAQEAGISMLTVHGRTRADLYH 180 Query: 179 GEAEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREID 238 GEAEY+TIAAVK +V+IPVVANGDITTP KAR VL +T ADA+M+GRAAQGRPW+FREI+ Sbjct: 181 GEAEYDTIAAVKGSVRIPVVANGDITTPAKARHVLDVTGADAIMIGRAAQGRPWLFREIE 240 Query: 239 HFLRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRR 298 HFL+TG LPAP V E+ +M+ HL+ HYAFYG+Y GVRTARKHI WY R L G FR Sbjct: 241 HFLKTGTLLPAPEVEEIRGIMNTHLEEHYAFYGEYTGVRTARKHIAWYTRGLAGANLFRH 300 Query: 299 SMNRIEDCAQQLQAVRQFFASQAAFGERLQY 329 MN IED A QL AV FF Q A +RL Y Sbjct: 301 RMNTIEDTAAQLAAVNAFFDEQRALSDRLVY 331 >Q475R2.1 Q475R2_CUPPJ tRNA-dihydrouridine synthase EC=1.-.-.- Length = 356 Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/337 (68%), Positives = 275/337 (81%), Gaps = 5/337 (1%) Query: 1 VNIGPYSLRNNVFVAPMAGVTDRPFRQLCKQLGAGYAVSEMAASDPRLWQSEKTSRRINH 60 + IGP+ LRNN+FVAPMAGVTDRPFRQLCKQLGAGYAVSEM AS+ +LW+SEKT RR NH Sbjct: 1 MQIGPHQLRNNLFVAPMAGVTDRPFRQLCKQLGAGYAVSEMVASNAQLWKSEKTMRRANH 60 Query: 61 DGEMEPKAVQIAGADPVMLADCAKYNVERGAQIIDINMGCPVKKVCNSWCGSALLQDEEL 120 GE+EP +VQIAGA+P M+A+ A+YNV+RGAQIIDINMGCP KKVCN GSALLQ+E L Sbjct: 61 AGEVEPISVQIAGAEPGMMAEAARYNVDRGAQIIDINMGCPAKKVCNVAAGSALLQNEPL 120 Query: 121 VARILDAVVSAVD--VPVTLKFRTGWNRANKNALKIAARAEAAGIAMLTLHGRTRADGYS 178 V RI++AVV+AV VPVTLK RTGWNR N+NAL+IA E AGI+MLT+HGRTRAD Y Sbjct: 121 VVRIVEAVVAAVGDRVPVTLKIRTGWNRENRNALRIARMVEDAGISMLTIHGRTRADLYH 180 Query: 179 GEAEYETIAAVKAAVKIPVVANGDITTPEKARDVLLLTKADAVMVGRAAQGRPWIFREID 238 G+AEYETIAAVKA ++IPVVANGDITTP+KA+ VL LT ADA+M+GRAAQGRPW+FREI+ Sbjct: 181 GDAEYETIAAVKAELRIPVVANGDITTPQKAKQVLALTGADAIMIGRAAQGRPWLFREIE 240 Query: 239 HFLRTGEHLPAPLVSEVEHLMDEHLQAHYAFYGDYLGVRTARKHIGWYVRDLPGGEQFRR 298 HF++TGE LP+P V+E+ +M+ HL+ HYAFYG++ GVRTARKHI WY R L G FR Sbjct: 241 HFMKTGELLPSPEVAEIRAIMNAHLEDHYAFYGEFTGVRTARKHIAWYTRGLRGANLFRH 300 Query: 299 SMNRIEDCAQQLQAVRQFFASQAAFGERLQYGLAVDE 335 MN +E +QL AV FF QA + +RL Y VDE Sbjct: 301 RMNTLESTGEQLAAVNAFFDEQAQWSDRLVY---VDE 334