BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0059.p (351 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IX72.1 D8IX72_HERSS Holliday junction ATP-dependent DNA helica... 700 0.0 A6SUQ4.1 RUVB_JANMA Holliday junction ATP-dependent DNA helicase... 650 0.0 A4G1U9.1 RUVB_HERAR Holliday junction ATP-dependent DNA helicase... 646 0.0 F1VW56.1 F1VW56_9BURK Holliday junction DNA helicase RuvB 624 e-177 C3XB58.1 C3XB58_OXAFO Holliday junction ATP-dependent DNA helica... 610 e-172 C3X4Z6.1 C3X4Z6_OXAFO Holliday junction ATP-dependent DNA helica... 610 e-172 Q8Y236.1 RUVB_RALSO Holliday junction ATP-dependent DNA helicase... 598 e-169 D8NYG3.1 D8NYG3_RALSO Holliday junction ATP-dependent DNA helica... 596 e-168 C6BC63.1 C6BC63_RALP1 Holliday junction ATP-dependent DNA helica... 596 e-168 E2SVN4.1 E2SVN4_9RALS Holliday junction ATP-dependent DNA helica... 596 e-168 >D8IX72.1 D8IX72_HERSS Holliday junction ATP-dependent DNA helicase ruvB EC=3.6.4.12 Length = 351 Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/351 (100%), Positives = 351/351 (100%) Query: 1 MSIQTDDFSEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARKRGE 60 MSIQTDDFSEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARKRGE Sbjct: 1 MSIQTDDFSEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARKRGE 60 Query: 61 PLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 PLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID Sbjct: 61 PLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 Query: 121 EIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 EIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD Sbjct: 121 EIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 Query: 181 RFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRVRDY 240 RFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRVRDY Sbjct: 181 RFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRVRDY 240 Query: 241 AEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAIGEE 300 AEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAIGEE Sbjct: 241 AEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAIGEE 300 Query: 301 RDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLWGG 351 RDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLWGG Sbjct: 301 RDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLWGG 351 >A6SUQ4.1 RUVB_JANMA Holliday junction ATP-dependent DNA helicase ruvB EC=3.6.4.12 Length = 352 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/351 (91%), Positives = 335/351 (95%) Query: 1 MSIQTDDFSEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARKRGE 60 MSIQTDDFSEQRII+ATPASANEEAIERALRPKQLDEYVGQEK+R QLEIFI+AAR+R E Sbjct: 1 MSIQTDDFSEQRIIAATPASANEEAIERALRPKQLDEYVGQEKIRGQLEIFITAARQRHE 60 Query: 61 PLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 LDHTLLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID Sbjct: 61 ALDHTLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 Query: 121 EIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 EIHR+SPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD Sbjct: 121 EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 Query: 181 RFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRVRDY 240 RFGIVARLEFYTP EL +IVTRS+ LLNAPI EDGA EIA+RSRGTPRIANRLLRRVRDY Sbjct: 181 RFGIVARLEFYTPLELTKIVTRSSALLNAPIDEDGAFEIAKRSRGTPRIANRLLRRVRDY 240 Query: 241 AEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAIGEE 300 AEVKG G+IT+ MADAALVMLDVDPVGFDLMDRKLLEAVLFKF GGPVGLDNLAAAIGEE Sbjct: 241 AEVKGNGKITKAMADAALVMLDVDPVGFDLMDRKLLEAVLFKFNGGPVGLDNLAAAIGEE 300 Query: 301 RDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLWGG 351 RDTIEDVLEPYLIQQG+LQRTPRGRIAT AY HFGVTAP+T PNGDLW G Sbjct: 301 RDTIEDVLEPYLIQQGFLQRTPRGRIATPVAYAHFGVTAPQTGPNGDLWAG 351 >A4G1U9.1 RUVB_HERAR Holliday junction ATP-dependent DNA helicase ruvB EC=3.6.4.12 Length = 352 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/351 (91%), Positives = 335/351 (95%) Query: 1 MSIQTDDFSEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARKRGE 60 MSIQTDDFSEQR+I+ATPASANEEAIERALRPKQLDEYVGQEK+R QLEIFI+AAR+R E Sbjct: 1 MSIQTDDFSEQRVIAATPASANEEAIERALRPKQLDEYVGQEKIRGQLEIFITAARQRRE 60 Query: 61 PLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 LDHTLLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID Sbjct: 61 ALDHTLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 Query: 121 EIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 EIHR+SPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD Sbjct: 121 EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 Query: 181 RFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRVRDY 240 RFGIVARLEFYTP EL RIVTRS+ LLNAPI EDGA EIA+RSRGTPRIANRLLRRVRDY Sbjct: 181 RFGIVARLEFYTPLELTRIVTRSSSLLNAPIDEDGAFEIAKRSRGTPRIANRLLRRVRDY 240 Query: 241 AEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAIGEE 300 AEVKG G IT+ MADAALVMLDVDPVGFD+MDRKLLEAVLFKF GGPVGLDNLAAAIGEE Sbjct: 241 AEVKGNGDITKAMADAALVMLDVDPVGFDVMDRKLLEAVLFKFNGGPVGLDNLAAAIGEE 300 Query: 301 RDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLWGG 351 RDTIEDVLEPYLIQQG+LQRTPRGRIAT AY HFGVTAP+T PNG+LWGG Sbjct: 301 RDTIEDVLEPYLIQQGFLQRTPRGRIATPVAYAHFGVTAPQTGPNGELWGG 351 >F1VW56.1 F1VW56_9BURK Holliday junction DNA helicase RuvB Length = 351 Score = 624 bits (1610), Expect = e-177, Method: Compositional matrix adjust. Identities = 312/350 (89%), Positives = 326/350 (93%) Query: 1 MSIQTDDFSEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARKRGE 60 MSIQTD+F+EQRI + TPAS NEEAIERALRPKQLDEYVGQEK+R QL IFI+AA++R E Sbjct: 1 MSIQTDNFTEQRITAPTPASPNEEAIERALRPKQLDEYVGQEKIRDQLSIFITAAKQRRE 60 Query: 61 PLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 LDHTLLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID Sbjct: 61 ALDHTLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 Query: 121 EIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 EIHR+SPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD Sbjct: 121 EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 Query: 181 RFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRVRDY 240 RFGIVARLEFYT ELARIVTRSA LLNAPI +GA EIA+RSRGTPRIANRLLRRVRDY Sbjct: 181 RFGIVARLEFYTATELARIVTRSASLLNAPIDPEGAFEIAKRSRGTPRIANRLLRRVRDY 240 Query: 241 AEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAIGEE 300 AEVK G IT+ ADAALVMLDVDPVGFDLMDRKLLEAVLFKF GGPVGLDNLAAAIGEE Sbjct: 241 AEVKSNGDITKATADAALVMLDVDPVGFDLMDRKLLEAVLFKFSGGPVGLDNLAAAIGEE 300 Query: 301 RDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLWG 350 R+TIEDVLEPYLIQQGYLQRTPRGRIAT AY HFGV APRT PNG+LWG Sbjct: 301 RETIEDVLEPYLIQQGYLQRTPRGRIATPLAYTHFGVAAPRTGPNGELWG 350 >C3XB58.1 C3XB58_OXAFO Holliday junction ATP-dependent DNA helicase ruvB EC=3.6.4.12 Length = 355 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 302/349 (86%), Positives = 321/349 (91%) Query: 1 MSIQTDDFSEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARKRGE 60 MSIQTDDFSE+RII A+PAS NEEAIERALRPK L+EYVGQ K R QLEIFI+AA+KR E Sbjct: 1 MSIQTDDFSEKRIIDASPASPNEEAIERALRPKLLNEYVGQHKTREQLEIFIAAAKKRNE 60 Query: 61 PLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 LDHTLLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLERAGDLAA+LTNLEANDVLFID Sbjct: 61 ALDHTLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAAILTNLEANDVLFID 120 Query: 121 EIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 EIHRMSPVVEEILYPALEDYQIDI+IGEGPAARSV+LDLQPFTL+GATTRAGMLTNPLRD Sbjct: 121 EIHRMSPVVEEILYPALEDYQIDILIGEGPAARSVKLDLQPFTLIGATTRAGMLTNPLRD 180 Query: 181 RFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRVRDY 240 RFG+VARLEFY +L RIVTRSA LL APIVE+GA EIARR+RGTPRIANRLLRRVRDY Sbjct: 181 RFGVVARLEFYDIDDLTRIVTRSAMLLKAPIVEEGAREIARRARGTPRIANRLLRRVRDY 240 Query: 241 AEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAIGEE 300 AEVKG G+IT +MADAAL MLDVDPVGFDLMDRKLLEAVLFKF GGPVG+ NLAAAIGEE Sbjct: 241 AEVKGTGKITHDMADAALKMLDVDPVGFDLMDRKLLEAVLFKFSGGPVGIANLAAAIGEE 300 Query: 301 RDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLW 349 DTIEDVLEPYLIQQGYLQRTPRGRIAT A Y+HFG+ AP PNG LW Sbjct: 301 VDTIEDVLEPYLIQQGYLQRTPRGRIATTATYRHFGIAAPAADPNGSLW 349 >C3X4Z6.1 C3X4Z6_OXAFO Holliday junction ATP-dependent DNA helicase ruvB EC=3.6.4.12 Length = 354 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 304/349 (87%), Positives = 320/349 (91%) Query: 1 MSIQTDDFSEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARKRGE 60 MSIQTDDFSE+RII A+PAS NEEA+ERALRPK L EYVGQ K R QLEIFI+AARKR E Sbjct: 1 MSIQTDDFSEKRIIDASPASPNEEAVERALRPKYLSEYVGQHKTREQLEIFIAAARKRQE 60 Query: 61 PLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID 120 LDHTLLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLER GDLAA+LTNLEANDVLFID Sbjct: 61 ALDHTLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAAILTNLEANDVLFID 120 Query: 121 EIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD 180 EIHRMSPVVEEILYPALEDYQIDI+IGEGPAARSV+LDLQPFTL+GATTRAGMLTNPLRD Sbjct: 121 EIHRMSPVVEEILYPALEDYQIDILIGEGPAARSVKLDLQPFTLIGATTRAGMLTNPLRD 180 Query: 181 RFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRVRDY 240 RFG+VARLEFY +L RIVTRSA LL APIVEDGA EIARR+RGTPRIANRLLRRVRDY Sbjct: 181 RFGVVARLEFYDIDDLTRIVTRSAMLLKAPIVEDGAREIARRARGTPRIANRLLRRVRDY 240 Query: 241 AEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAIGEE 300 AEVKG G ITREMADAAL MLDVDPVGFDLMDRKLLEAVLFKF GGPVG+ NLAAAIGEE Sbjct: 241 AEVKGTGEITREMADAALKMLDVDPVGFDLMDRKLLEAVLFKFSGGPVGIANLAAAIGEE 300 Query: 301 RDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLW 349 DTIEDVLEPYLIQQGYLQRTPRGRIAT A Y+HFGV AP + P G+LW Sbjct: 301 VDTIEDVLEPYLIQQGYLQRTPRGRIATTATYRHFGVVAPSSDPTGNLW 349 >Q8Y236.1 RUVB_RALSO Holliday junction ATP-dependent DNA helicase ruvB EC=3.6.4.12 Length = 357 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 300/352 (85%), Positives = 320/352 (90%), Gaps = 5/352 (1%) Query: 3 IQTDDF-----SEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARK 57 I+TD S +R+ISA+PAS NEEA ERALRPK LDEYVGQEKVR QL+IF++AA+K Sbjct: 2 IETDKLAAKAVSAERLISASPASPNEEAFERALRPKLLDEYVGQEKVRGQLDIFMTAAKK 61 Query: 58 RGEPLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVL 117 R E LDH LLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLER GDLAALLTNLEANDVL Sbjct: 62 RREALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVL 121 Query: 118 FIDEIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNP 177 FIDEIHR+SPVVEEILYPALEDYQIDIMIGEGPAARSV+LDLQPFTLVGATTRAGMLTNP Sbjct: 122 FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNP 181 Query: 178 LRDRFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRV 237 LRDRFGIVARLEFYTP ELARIVTRSAGLL+A I EDGALEIA+RSRGTPRIANRLLRRV Sbjct: 182 LRDRFGIVARLEFYTPTELARIVTRSAGLLDARIAEDGALEIAKRSRGTPRIANRLLRRV 241 Query: 238 RDYAEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAI 297 RDYAEVK G ITR +ADAAL MLDVD VGFDLMDRKLLEA+L KF GGPVG+DNLAAAI Sbjct: 242 RDYAEVKADGVITRAVADAALAMLDVDAVGFDLMDRKLLEAILHKFNGGPVGIDNLAAAI 301 Query: 298 GEERDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLW 349 GEERDTIEDVLEPYLIQQGYLQRTPRGR+AT +AYQHFG+ AP+T P DLW Sbjct: 302 GEERDTIEDVLEPYLIQQGYLQRTPRGRVATASAYQHFGLGAPKTGPARDLW 353 >D8NYG3.1 D8NYG3_RALSO Holliday junction ATP-dependent DNA helicase ruvB 5 EC=3.6.4.12 Length = 357 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 299/352 (84%), Positives = 320/352 (90%), Gaps = 5/352 (1%) Query: 3 IQTDDF-----SEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARK 57 I+TD S +R+ISA+PAS NEEA ERALRPK LDEYVGQEKVR QL+IF++AA+K Sbjct: 2 IETDKLAAKAVSAERLISASPASPNEEAFERALRPKLLDEYVGQEKVRGQLDIFMTAAKK 61 Query: 58 RGEPLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVL 117 R E LDH LLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLER GDLAALLTNLEANDVL Sbjct: 62 RREALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVL 121 Query: 118 FIDEIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNP 177 FIDEIHR+SPVVEEILYPALEDYQIDIMIGEGPAARSV+LDLQPFTLVGATTRAGMLTNP Sbjct: 122 FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNP 181 Query: 178 LRDRFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRV 237 LRDRFGIVARLEFYTP ELARIV RSAGLL+A IV+DGALEIA+RSRGTPRIANRLLRRV Sbjct: 182 LRDRFGIVARLEFYTPTELARIVKRSAGLLDAQIVDDGALEIAKRSRGTPRIANRLLRRV 241 Query: 238 RDYAEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAI 297 RDYAEVK G ITR +ADAAL MLDVD VGFDLMDRKLLEA+L KF GGPVG+DNLAAAI Sbjct: 242 RDYAEVKADGIITRAVADAALAMLDVDAVGFDLMDRKLLEAILHKFNGGPVGIDNLAAAI 301 Query: 298 GEERDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLW 349 GEERDTIEDVLEPYLIQQGYLQRTPRGR+AT +AYQHFG+ AP+T P DLW Sbjct: 302 GEERDTIEDVLEPYLIQQGYLQRTPRGRVATASAYQHFGLGAPKTGPVRDLW 353 >C6BC63.1 C6BC63_RALP1 Holliday junction ATP-dependent DNA helicase ruvB EC=3.6.4.12 Length = 357 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 297/352 (84%), Positives = 321/352 (91%), Gaps = 5/352 (1%) Query: 3 IQTDDF-----SEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARK 57 I+TD S +RIISA+PAS NEEA ERALRPK LDEYVGQEKVR QL+IF++AA+ Sbjct: 2 IETDKLAAKAVSAERIISASPASPNEEAFERALRPKLLDEYVGQEKVRGQLDIFMTAAKN 61 Query: 58 RGEPLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVL 117 R E LDH LLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLER GDLAALLTNLEANDVL Sbjct: 62 RSEALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVL 121 Query: 118 FIDEIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNP 177 FIDEIHR+SPVVEEILYPALEDYQIDIMIGEGPAARSV+LDLQPFTLVGATTRAGMLTNP Sbjct: 122 FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNP 181 Query: 178 LRDRFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRV 237 LRDRFGIVARLEFYTP ELA+IVTRS+GLLNA IV++GALEIA+RSRGTPRIANRLLRRV Sbjct: 182 LRDRFGIVARLEFYTPAELAKIVTRSSGLLNAHIVDEGALEIAKRSRGTPRIANRLLRRV 241 Query: 238 RDYAEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAI 297 RD+AEVK G ITRE+ADAAL MLDVD VGFDLMDRKLLEA+L KF GGPVG+DNLAAAI Sbjct: 242 RDFAEVKADGIITREVADAALAMLDVDAVGFDLMDRKLLEAILHKFNGGPVGIDNLAAAI 301 Query: 298 GEERDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLW 349 GEERDTIEDVLEPYLIQQGYLQRTPRGR+AT +AYQHFG+ AP++ P DLW Sbjct: 302 GEERDTIEDVLEPYLIQQGYLQRTPRGRVATASAYQHFGLGAPKSGPVRDLW 353 >E2SVN4.1 E2SVN4_9RALS Holliday junction ATP-dependent DNA helicase ruvB EC=3.6.4.12 Length = 357 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 297/352 (84%), Positives = 321/352 (91%), Gaps = 5/352 (1%) Query: 3 IQTDDF-----SEQRIISATPASANEEAIERALRPKQLDEYVGQEKVRAQLEIFISAARK 57 I+TD S +RIISA+PAS NEEA ERALRPK LDEYVGQEKVR QL+IF++AA+ Sbjct: 2 IETDKLAAKAVSAERIISASPASPNEEAFERALRPKLLDEYVGQEKVRGQLDIFMTAAKN 61 Query: 58 RGEPLDHTLLFGPPGLGKTTMAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVL 117 R E LDH LLFGPPGLGKTT+AHIIAREMGVNLRQTSGPVLER GDLAALLTNLEANDVL Sbjct: 62 RSEALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVL 121 Query: 118 FIDEIHRMSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNP 177 FIDEIHR+SPVVEEILYPALEDYQIDIMIGEGPAARSV+LDLQPFTLVGATTRAGMLTNP Sbjct: 122 FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNP 181 Query: 178 LRDRFGIVARLEFYTPPELARIVTRSAGLLNAPIVEDGALEIARRSRGTPRIANRLLRRV 237 LRDRFGIVARLEFYTP ELA+IVTRS+GLLNA IV++GALEIA+RSRGTPRIANRLLRRV Sbjct: 182 LRDRFGIVARLEFYTPAELAKIVTRSSGLLNAHIVDEGALEIAKRSRGTPRIANRLLRRV 241 Query: 238 RDYAEVKGQGRITREMADAALVMLDVDPVGFDLMDRKLLEAVLFKFGGGPVGLDNLAAAI 297 RD+AEVK G ITRE+ADAAL MLDVD VGFDLMDRKLLEA+L KF GGPVG+DNLAAAI Sbjct: 242 RDFAEVKADGIITREVADAALAMLDVDAVGFDLMDRKLLEAILHKFNGGPVGIDNLAAAI 301 Query: 298 GEERDTIEDVLEPYLIQQGYLQRTPRGRIATGAAYQHFGVTAPRTSPNGDLW 349 GEERDTIEDVLEPYLIQQGYLQRTPRGR+AT +AYQHFG+ AP++ P DLW Sbjct: 302 GEERDTIEDVLEPYLIQQGYLQRTPRGRVATASAYQHFGLGAPKSGPVRDLW 353