BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0021.p (916 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IXA4.1 D8IXA4_HERSS DNA polymerase I protein EC=2.7.7.7 1885 0.0 A4G1W0.2 A4G1W0_HERAR DNA polymerase I (POL I) EC=2.7.7.7 1480 0.0 A6SUR6.1 A6SUR6_JANMA DNA polymerase I EC=2.7.7.7 1467 0.0 F1W332.1 F1W332_9BURK DNA polymerase I 1441 0.0 D8N9N3.1 D8N9N3_RALSO DNA polymerase I (POL I) EC=2.7.7.7 1357 0.0 Q8XX86.1 Q8XX86_RALSO Probable dna polymeraseIprotein EC=2.7.7.7 1350 0.0 B3R5F3.1 B3R5F3_CUPTR DNA polymerase A; 5'->3' exonuclease ; 3'-... 1338 0.0 D8P0V6.1 D8P0V6_RALSO DNA polymerase I (POL I) EC=2.7.7.7 1336 0.0 Q1LK25.1 Q1LK25_RALME Fused DNA polymerase I 5'->3' exonuclease ... 1336 0.0 Q0K851.1 Q0K851_CUPNH DNA polymerase I EC=2.7.7.7 1335 0.0 >D8IXA4.1 D8IXA4_HERSS DNA polymerase I protein EC=2.7.7.7 Length = 920 Score = 1885 bits (4884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 913/916 (99%), Positives = 916/916 (100%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 60 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT Sbjct: 5 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 64 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA Sbjct: 65 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 124 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD Sbjct: 125 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 184 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGVEKCGPKTAVKWLTAYG+LDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD Sbjct: 185 NVPGVEKCGPKTAVKWLTAYGTLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 244 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGASAAA 300 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGASAAA Sbjct: 245 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGASAAA 304 Query: 301 ALEAPAQGGLFAAAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLEAMQAELVGI 360 ALEAPAQGGLFAAAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLEAMQAELVGI Sbjct: 305 ALEAPAQGGLFAAAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLEAMQAELVGI 364 Query: 361 SLCCEPGRAAYIPVAHNYQDAPVQLSRQHVLEKLKPWLEDASKPKLGQHLKYDSHIFANY 420 SLCCEPGRAAYIPVAHNYQDAPVQLSRQHVLEKLKPWLEDASKPKLGQHLKYDSHIFANY Sbjct: 365 SLCCEPGRAAYIPVAHNYQDAPVQLSRQHVLEKLKPWLEDASKPKLGQHLKYDSHIFANY 424 Query: 421 GVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNEVAIE 480 GVRLAGV+HDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNEVAIE Sbjct: 425 GVRLAGVKHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNEVAIE 484 Query: 481 RATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQKIERNGVLIDSERL 540 RATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQKIERNGVLIDSERL Sbjct: 485 RATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQKIERNGVLIDSERL 544 Query: 541 GQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPSTDEE 600 GQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPSTDEE Sbjct: 545 GQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPSTDEE 604 Query: 601 VLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAVTGRLSSN 660 VLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAVTGRLSSN Sbjct: 605 VLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAVTGRLSSN 664 Query: 661 DPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHISEDENMLKAFANNED 720 DPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHISEDENMLKAFANNED Sbjct: 665 DPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHISEDENMLKAFANNED 724 Query: 721 IHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQMYIDKYF 780 IHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQMYIDKYF Sbjct: 725 IHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQMYIDKYF 784 Query: 781 MRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGTA 840 MRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGTA Sbjct: 785 MRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGTA 844 Query: 841 ADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELEVVREKLPELMKNVAELKV 900 ADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELE+VREKLPELMKNVAELKV Sbjct: 845 ADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELEMVREKLPELMKNVAELKV 904 Query: 901 PLLAEVGIGKNWDEAH 916 PLLAEVGIGKNWDEAH Sbjct: 905 PLLAEVGIGKNWDEAH 920 >A4G1W0.2 A4G1W0_HERAR DNA polymerase I (POL I) EC=2.7.7.7 Length = 917 Score = 1480 bits (3831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 714/920 (77%), Positives = 801/920 (87%), Gaps = 17/920 (1%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYP-ASYVACVFDAKGK 59 LLLVDGSSYLYRAFHA+PD+R EGAPTGA+YG+INMLRRLR DYP A Y+ACVFDAKGK Sbjct: 11 LLLVDGSSYLYRAFHAMPDLRGPEGAPTGAIYGMINMLRRLRKDYPDAEYMACVFDAKGK 70 Query: 60 TFRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATA 119 TFRDDLY +YKA R SMP+DL QIEPIH AVRA+GWPILMV+GIEADDVI TL+V A Sbjct: 71 TFRDDLYAEYKAQRASMPDDLVRQIEPIHEAVRAMGWPILMVDGIEADDVIATLAVAAVG 130 Query: 120 AGLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTV 179 G++T++STGDKD+AQLVNEHVTLVNTMS E+LD GV AKFGVPPERIVDYL+L+GDTV Sbjct: 131 HGINTVISTGDKDLAQLVNEHVTLVNTMSGEILDRDGVLAKFGVPPERIVDYLTLVGDTV 190 Query: 180 DNVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKT 239 DNVPGVEK GPKTAVKWLT YG+LDG++A+A +I GVVGENLRRALDWLPQ +VL+TVKT Sbjct: 191 DNVPGVEKVGPKTAVKWLTQYGTLDGIVAHAAEIKGVVGENLRRALDWLPQAKVLITVKT 250 Query: 240 DCDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGASAA 299 DCDLSAHM+ I ESLT + +D + + F R F++WLREL++ E AS Sbjct: 251 DCDLSAHMTEIPESLTQKTEDIEAMVAFFKRNGFKSWLRELTEKTEMPASAT-------- 302 Query: 300 AALEAPAQGGLFAA-APKVE--YETVLTDAQLDQWIATINAAELTAVDTETTSLEAMQAE 356 AP QG LF P+VE YETV T+A LD+W+ INAAELTA+DTETTSLE MQA+ Sbjct: 303 ----AP-QGALFGEDTPEVEKHYETVWTEANLDRWLQKINAAELTAIDTETTSLEPMQAQ 357 Query: 357 LVGISLCCEPGRAAYIPVAHNYQDAPVQLSRQHVLEKLKPWLEDASKPKLGQHLKYDSHI 416 LVGISLCCEPG AAYIPVAH YQD P+QLSR VLEKL+ WLED SKPK+GQ+LKYDSHI Sbjct: 358 LVGISLCCEPGVAAYIPVAHRYQDVPLQLSRASVLEKLRSWLEDDSKPKVGQNLKYDSHI 417 Query: 417 FANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNE 476 FAN+GV L G+ HDTLL+SYVFESHR HDMDSLA RHL RKT+T+ +VCGKGASQ+ F++ Sbjct: 418 FANHGVTLRGIVHDTLLQSYVFESHRSHDMDSLALRHLNRKTMTFQDVCGKGASQLCFDQ 477 Query: 477 VAIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQKIERNGVLID 536 V I RATEYAAEDA++TL LHQ M+P + D L F+YEKIE+PT+VVLQK+ERNGVLID Sbjct: 478 VDIARATEYAAEDADITLQLHQRMFPHVAEDAGLSFVYEKIELPTAVVLQKVERNGVLID 537 Query: 537 SERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPS 596 L QSH+LGKRMLEIEQQAY+LAGQPFNL SPKQ+GEI F K++LPVVKKT SG+PS Sbjct: 538 PGLLATQSHELGKRMLEIEQQAYELAGQPFNLGSPKQIGEIFFEKMKLPVVKKTPSGSPS 597 Query: 597 TDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAVTGR 656 TDEEVLQKLAEDYPLPK+LL+YRGL+KLKSTYTDKLPKM++PATGRVHTNYAQAVAVTGR Sbjct: 598 TDEEVLQKLAEDYPLPKLLLEYRGLSKLKSTYTDKLPKMIDPATGRVHTNYAQAVAVTGR 657 Query: 657 LSSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHISEDENMLKAFA 716 LSSNDPNLQNIPIR AEGRRIREAF+AP GSVIVSADYSQIELRIMAHISEDENML+AFA Sbjct: 658 LSSNDPNLQNIPIRNAEGRRIREAFIAPPGSVIVSADYSQIELRIMAHISEDENMLRAFA 717 Query: 717 NNEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQMYI 776 EDIHRATAAEIFG+A V SEQRRYAKVINFGLIYGMSAFGLA NLGIERAAAQ YI Sbjct: 718 EGEDIHRATAAEIFGVARGDVSSEQRRYAKVINFGLIYGMSAFGLAGNLGIERAAAQSYI 777 Query: 777 DKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPM 836 +KYF RFSGVKRYMD+TRL+AKARGYV+TVFGRRLWLPEINSPNGPRRQGAERAAINAPM Sbjct: 778 EKYFYRFSGVKRYMDDTRLEAKARGYVQTVFGRRLWLPEINSPNGPRRQGAERAAINAPM 837 Query: 837 QGTAADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELEVVREKLPELMKNVA 896 QGTAADLIK+AMIAVQDWLE LQT+MIMQVHDELVLEVP+ EL +VR KLPELM+NVA Sbjct: 838 QGTAADLIKLAMIAVQDWLEAEKLQTKMIMQVHDELVLEVPETELALVRVKLPELMRNVA 897 Query: 897 ELKVPLLAEVGIGKNWDEAH 916 +LKVPL+AEVG+GKNWDEAH Sbjct: 898 QLKVPLIAEVGVGKNWDEAH 917 >A6SUR6.1 A6SUR6_JANMA DNA polymerase I EC=2.7.7.7 Length = 912 Score = 1467 bits (3799), Expect = 0.0, Method: Compositional matrix adjust. Identities = 706/919 (76%), Positives = 807/919 (87%), Gaps = 11/919 (1%) Query: 2 LLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYP-ASYVACVFDAKGKT 60 +LVDGSSYLYRAFHA+PD+R GAPTGA+YG+INMLRRLR DYP A Y+ACVFDAKGKT Sbjct: 1 MLVDGSSYLYRAFHAMPDLRGPNGAPTGAIYGMINMLRRLRKDYPDAEYMACVFDAKGKT 60 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRDDLY +YKA R SMP+DL QIEPIH AVRA+GWPILMVEGIEADDVIGTL+V+A Sbjct: 61 FRDDLYAEYKAQRASMPDDLVKQIEPIHEAVRAMGWPILMVEGIEADDVIGTLAVEAVKH 120 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 G+DT++STGDKD+AQLVN+ V L+NTMSNE LD GV AKFGVPPERI+DYL+LIGDTVD Sbjct: 121 GMDTVISTGDKDLAQLVNDRVMLINTMSNEKLDRDGVIAKFGVPPERIIDYLTLIGDTVD 180 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGV+K GPKTAVKWLT YG+LDG++ +A I G VG+NLRRALDWLPQ + L+TVKTD Sbjct: 181 NVPGVDKVGPKTAVKWLTQYGTLDGIVEHAADIKGAVGDNLRRALDWLPQAKTLITVKTD 240 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGASAAA 300 CDLS HM +I+ESLT +P+DKD + + FTR F+TWLRELSD EA + +AA Sbjct: 241 CDLSGHMDTIVESLTQRPEDKDAMIDFFTRNGFKTWLRELSDKPEAADA-------AAAP 293 Query: 301 ALEAPAQGGLFAA-APKVE--YETVLTDAQLDQWIATINAAELTAVDTETTSLEAMQAEL 357 A +A QG LFA AP+VE YET+LT+A+L++W+ I++A LT++DTETTSL MQA+L Sbjct: 294 AADAAPQGALFADDAPEVEKHYETILTEAELERWLQKIDSAVLTSIDTETTSLIPMQAQL 353 Query: 358 VGISLCCEPGRAAYIPVAHNYQDAPVQLSRQHVLEKLKPWLEDASKPKLGQHLKYDSHIF 417 VGISLCCEPG AAYIPVAH+YQD P QLSR+ VLEK+KPWLEDASK K+GQ+LKYDSHIF Sbjct: 354 VGISLCCEPGVAAYIPVAHHYQDVPQQLSRELVLEKMKPWLEDASKAKVGQNLKYDSHIF 413 Query: 418 ANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNEV 477 AN+GV L G+ HDTLLESYVFESHR HDMDSLA RHL RKTIT+ EVCGKGASQIGF +V Sbjct: 414 ANHGVNLRGIVHDTLLESYVFESHRSHDMDSLALRHLNRKTITFQEVCGKGASQIGFEQV 473 Query: 478 AIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQKIERNGVLIDS 537 I RATEYAAEDA++TL LHQ MWP + D+ L F+YEKIE+PT+VVLQKIERNGVLID Sbjct: 474 EIGRATEYAAEDADITLQLHQRMWPNVAEDNGLTFVYEKIELPTAVVLQKIERNGVLIDP 533 Query: 538 ERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPST 597 + L +QS++LGKRMLEIEQ AY+LA QPFNLNSPKQ+GEI F KL+LPVVKKT SG+PST Sbjct: 534 DLLAKQSNELGKRMLEIEQNAYELAEQPFNLNSPKQIGEIFFEKLKLPVVKKTPSGSPST 593 Query: 598 DEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAVTGRL 657 DEEVLQKLAEDYPLPKVLL+YRGL+KLKSTYTDKLPKM++P TGRVHTNYAQAVAVTGRL Sbjct: 594 DEEVLQKLAEDYPLPKVLLEYRGLSKLKSTYTDKLPKMIDPTTGRVHTNYAQAVAVTGRL 653 Query: 658 SSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHISEDENMLKAFAN 717 +SNDPNLQNIPIR AEGRRIREAF+A G+VIVSADYSQIELRIMAHIS DENML+AFA+ Sbjct: 654 ASNDPNLQNIPIRNAEGRRIREAFIAAPGNVIVSADYSQIELRIMAHISGDENMLQAFAD 713 Query: 718 NEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQMYID 777 EDIHRATAAEIFG+ V+SEQRRYAKVINFGLIYGMSAFGLA NLGIER+AAQ YI+ Sbjct: 714 GEDIHRATAAEIFGVERRAVDSEQRRYAKVINFGLIYGMSAFGLAGNLGIERSAAQSYIE 773 Query: 778 KYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ 837 +YF RF+GVKRYMDETRL+AKARGYV+TVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ Sbjct: 774 RYFHRFAGVKRYMDETRLEAKARGYVQTVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ 833 Query: 838 GTAADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELEVVREKLPELMKNVAE 897 GTAADLIK+AMIAVQ WLET LQ++MIMQVHDELVLEVP+ EL +VREKLPELM++VA+ Sbjct: 834 GTAADLIKLAMIAVQGWLETEKLQSKMIMQVHDELVLEVPETELPLVREKLPELMRHVAQ 893 Query: 898 LKVPLLAEVGIGKNWDEAH 916 LKVPL+AEVG+G NWD+AH Sbjct: 894 LKVPLIAEVGVGNNWDKAH 912 >F1W332.1 F1W332_9BURK DNA polymerase I Length = 914 Score = 1441 bits (3730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 697/919 (75%), Positives = 787/919 (85%), Gaps = 12/919 (1%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 60 LLLVDGSSYLYRAFHALPD+RN EGAPTGALYGIINMLRRLR+D+PA+Y+ACVFDAKGKT Sbjct: 5 LLLVDGSSYLYRAFHALPDLRNKEGAPTGALYGIINMLRRLRSDFPAAYIACVFDAKGKT 64 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRDDLY +YKA R SMPEDLA Q+EPIH AVRA+GWP++MVEG+EADDVIGTL+V A Sbjct: 65 FRDDLYAEYKAQRASMPEDLARQVEPIHEAVRAMGWPLIMVEGVEADDVIGTLAVDAVRH 124 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 G+ ++STGDKD+AQLVN+ V L+NTMSNE LD GV AKFGVPPERIVDYL+LIGDTVD Sbjct: 125 GMKAVISTGDKDLAQLVNDDVMLINTMSNERLDRDGVLAKFGVPPERIVDYLTLIGDTVD 184 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGV K GPKTAVKWLT YG+LDG++ NA I G VGENLR+ALDWLPQ +VL+TVKTD Sbjct: 185 NVPGVSKVGPKTAVKWLTQYGTLDGIVENAANIGGAVGENLRKALDWLPQAKVLITVKTD 244 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGASAAA 300 CDL HM SI ESL + QD + +L+ R+ F+TWLRE A A+ A V A+AA Sbjct: 245 CDLVDHMVSIPESLMAKEQDPAKMIDLYARFGFKTWLRE------ATAASAEEVIATAAP 298 Query: 301 ALEAPAQGGLF---AAAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLEAMQAEL 357 A AQ GLF AA + Y+T+LT+A LD+W+A I+AA LT++DTETTSL +QA+L Sbjct: 299 A---DAQSGLFDAPAAPAEQRYDTILTEADLDRWLAIIDAAALTSIDTETTSLVPLQAQL 355 Query: 358 VGISLCCEPGRAAYIPVAHNYQDAPVQLSRQHVLEKLKPWLEDASKPKLGQHLKYDSHIF 417 VGISLCCEPG AAYIPVAH Y DAPVQLSR+ VL K++ WLED +K K+GQ+LKYDSHIF Sbjct: 356 VGISLCCEPGVAAYIPVAHRYADAPVQLSRELVLGKMQAWLEDPAKAKVGQNLKYDSHIF 415 Query: 418 ANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGKGASQIGFNEV 477 AN+G+ L G+ HDT+LESYVFESHR HDMDSLA RHL R TIT+ EVCGKGASQI F++V Sbjct: 416 ANHGITLRGIAHDTMLESYVFESHRSHDMDSLALRHLGRTTITFQEVCGKGASQICFDQV 475 Query: 478 AIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQKIERNGVLIDS 537 I RATEYAAEDA++TL LHQAM PQ+ D+ L F+YEKIEVPT+VVLQKIERNGVLID+ Sbjct: 476 DIARATEYAAEDADITLQLHQAMLPQVTSDEGLLFVYEKIEVPTAVVLQKIERNGVLIDT 535 Query: 538 ERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVVKKTASGAPST 597 L QSH+LGKRMLEIE AY+LAGQPFNLNSPKQ+GEI F KL+LPVVKKT SGAPST Sbjct: 536 GILQVQSHELGKRMLEIETSAYELAGQPFNLNSPKQIGEIFFEKLQLPVVKKTPSGAPST 595 Query: 598 DEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTNYAQAVAVTGRL 657 DEEVL KLAEDYPLPKVLL+YR L+KLKSTYTDKLPKM++P TGRVHTNYAQ VAVTGRL Sbjct: 596 DEEVLAKLAEDYPLPKVLLEYRSLSKLKSTYTDKLPKMIDPTTGRVHTNYAQTVAVTGRL 655 Query: 658 SSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHISEDENMLKAFAN 717 +SN+PNLQNIPIRTAEGRRIREAFVAP GSVIVSADYSQIELRIMAH+S D NML+AFA+ Sbjct: 656 ASNEPNLQNIPIRTAEGRRIREAFVAPAGSVIVSADYSQIELRIMAHLSGDANMLRAFAD 715 Query: 718 NEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLGIERAAAQMYID 777 DIHRATAAEIF V +EQRRYAKVINFGLIYGMSAFGLA NLGIER AAQ YID Sbjct: 716 GIDIHRATAAEIFSTGAADVTTEQRRYAKVINFGLIYGMSAFGLAGNLGIERGAAQSYID 775 Query: 778 KYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ 837 KYF RFSGVK++MDETRL+AKA GYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ Sbjct: 776 KYFARFSGVKQFMDETRLKAKAHGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ 835 Query: 838 GTAADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELEVVREKLPELMKNVAE 897 GTAADLIK++M+AVQ WLET+ L++ M+MQVHDELVLEVPQ+ELE+VR KLP LM VAE Sbjct: 836 GTAADLIKLSMVAVQGWLETDGLKSLMVMQVHDELVLEVPQEELELVRVKLPALMAGVAE 895 Query: 898 LKVPLLAEVGIGKNWDEAH 916 LKVPL AEVGIGKNWDEAH Sbjct: 896 LKVPLTAEVGIGKNWDEAH 914 >D8N9N3.1 D8N9N3_RALSO DNA polymerase I (POL I) EC=2.7.7.7 Length = 959 Score = 1357 bits (3511), Expect = 0.0, Method: Compositional matrix adjust. Identities = 657/937 (70%), Positives = 771/937 (82%), Gaps = 22/937 (2%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 60 LLLVDGSSYLYRA+HALPD+RN EG PTGA+YGI+NMLR+LRNDYPA Y ACVFDAKGKT Sbjct: 24 LLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACVFDAKGKT 83 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRDDLYP YK R MP+DL QIEPIH AVRALGWPILMV+G+EADDVIGTL+ +AT Sbjct: 84 FRDDLYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILMVDGVEADDVIGTLAERATRE 143 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 G+ T+VSTGDKD+AQLVN+HVTLVNTMSNE LD AGV AKFGVPP +IVDYLSLIGDTVD Sbjct: 144 GVRTVVSTGDKDLAQLVNDHVTLVNTMSNETLDPAGVLAKFGVPPGKIVDYLSLIGDTVD 203 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGV K GPKTAVKWL YGSLD V+A A +I GVVGENLR LDWLP+GR L+TVKTD Sbjct: 204 NVPGVPKVGPKTAVKWLGEYGSLDSVIARAGEIKGVVGENLRNTLDWLPKGRELLTVKTD 263 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRE-----LSDGAEAGASKAPMVG 295 CDL+ + + +L +D+ L + F RY F+TWLRE L D GA++ Sbjct: 264 CDLATEVPT-FAALIDGGEDRAKLVDFFGRYGFKTWLREASGESLPDTRSVGAARKAATP 322 Query: 296 ASAAAALEAPAQGGLF---AAAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLEA 352 A A Q LF A +V+YETV T+AQL+ W+ ++A+ L +DTETTS++ Sbjct: 323 VKQYAPEAAAQQASLFDVEAPPAEVKYETVTTEAQLESWMRLLDASALVCLDTETTSIDP 382 Query: 353 MQAELVGISLCCEPGRAAYIPVAHNYQD-----APVQLSRQHVLEKLKPWLEDASKPKLG 407 MQA+LVG+SL EPG+A YIPVAH D A QL+R+ VL ++KPWLEDAS+ K+G Sbjct: 383 MQAQLVGLSLSVEPGQACYIPVAHRGPDVSGLEAAGQLAREAVLARMKPWLEDASRKKVG 442 Query: 408 QHLKYDSHIFANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCGK 467 QHLKYD+H+FAN+G+ L G+ HDT+L+SYV SHR H MD+LA R L KTITY EVCGK Sbjct: 443 QHLKYDAHVFANHGIALRGIAHDTMLQSYVLASHRNHGMDALAERVLHLKTITYEEVCGK 502 Query: 468 GASQIGFNEVAIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQK 527 GASQIGF+EV ++RATEYAAEDA++TL LH+AM+P++ DDKLR++YE+IE+PTS+VLQK Sbjct: 503 GASQIGFDEVPLDRATEYAAEDADITLRLHRAMYPKVAEDDKLRYVYEQIEMPTSIVLQK 562 Query: 528 IERNGVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPVV 587 +ERNGVLID+ERL +QS LG+R+LE+EQQAY LAGQPFNLNSPKQ+GEI F +L+LPV+ Sbjct: 563 MERNGVLIDAERLARQSTGLGQRLLELEQQAYALAGQPFNLNSPKQIGEIFFTQLKLPVI 622 Query: 588 KKTASGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTNY 647 KKTASGAPSTDEEVLQKLAEDYPLPK+LLD+RGLAKLKSTYTDKLPKMVNP TGRVHT Y Sbjct: 623 KKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLKSTYTDKLPKMVNPQTGRVHTTY 682 Query: 648 AQAVAVTGRLSSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHISE 707 QA AVTGRL+S DPNLQNIP+RT EGRRIREAFVAP GSVIVSADYSQIELRIMAH+SE Sbjct: 683 GQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFVAPAGSVIVSADYSQIELRIMAHLSE 742 Query: 708 DENMLKAFANNEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLGI 767 DE +L+AF +D+HRATAAE+FG+ P +V +EQRRYAKVINFGLIYGMSAFGLASNLGI Sbjct: 743 DEGLLRAFREGQDVHRATAAEVFGVTPLEVTAEQRRYAKVINFGLIYGMSAFGLASNLGI 802 Query: 768 ERAAAQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGA 827 R AA++YID+YF R+ GV RYMDETRL A RGYVETVFGRRLWLP+IN NGPRRQ A Sbjct: 803 GRDAAKLYIDRYFARYPGVARYMDETRLVAHERGYVETVFGRRLWLPDINGGNGPRRQAA 862 Query: 828 ERAAINAPMQGTAADLIKMAMIAVQDWLETN--------SLQTRMIMQVHDELVLEVPQQ 879 ERAAINAPMQGTAADLIK++M+AVQDWL+ + ++TR +MQVHDELVLEVPQ+ Sbjct: 863 ERAAINAPMQGTAADLIKLSMLAVQDWLDGSPSTGKPGAPMRTRQVMQVHDELVLEVPQE 922 Query: 880 ELEVVREKLPELMKNVAELKVPLLAEVGIGKNWDEAH 916 EL +VRE+LPELM VA L+VPL+AEVG+G NW+EAH Sbjct: 923 ELSLVRERLPELMCGVAALRVPLVAEVGVGANWEEAH 959 >Q8XX86.1 Q8XX86_RALSO Probable dna polymeraseIprotein EC=2.7.7.7 Length = 946 Score = 1350 bits (3494), Expect = 0.0, Method: Compositional matrix adjust. Identities = 658/938 (70%), Positives = 774/938 (82%), Gaps = 23/938 (2%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 60 LLLVDGSSYLYRA+HALPD+RN EG PTGA+YGI+NMLR+LRNDYPA Y ACVFDAKGKT Sbjct: 10 LLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACVFDAKGKT 69 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRD+LYP YK R MP+DL QIEPIH AVRALGWPILMV+G+EADDVIGTL+ +A Sbjct: 70 FRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILMVDGVEADDVIGTLAERAARE 129 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 G+ T+VSTGDKD+AQLVN+HVTLVNTMSNE LD AGV AKFGVPP +IVDYLSLIGDTVD Sbjct: 130 GIRTVVSTGDKDLAQLVNDHVTLVNTMSNETLDPAGVLAKFGVPPGKIVDYLSLIGDTVD 189 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGV K GPKTAVKWL YGSLD V+A A +I GVVGENLR LDWLP+GR L+TVKTD Sbjct: 190 NVPGVPKVGPKTAVKWLGEYGSLDSVIARAGEIKGVVGENLRNTLDWLPKGRELLTVKTD 249 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRE-----LSDGAEAGAS-KAPMV 294 CDL+ + + E+L +D+ L + F RY F+TWLRE L D GA+ KA Sbjct: 250 CDLATEVPT-FEALVDGGEDRAKLVDFFGRYGFKTWLREASGESLPDTRSVGAARKAATP 308 Query: 295 GASAAAALEAPAQGGLF---AAAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLE 351 A A Q GLF A +V+YETV T+AQL+ W+ ++A+EL +DTETTS++ Sbjct: 309 VKQYAPEAAAQPQAGLFDVEAPPAEVKYETVTTEAQLESWMRLLDASELVCIDTETTSID 368 Query: 352 AMQAELVGISLCCEPGRAAYIPVAH-----NYQDAPVQLSRQHVLEKLKPWLEDASKPKL 406 M A+LVG+SL EPG+A YIPVAH + DA QLSR+ VL ++KPWLEDA++ K+ Sbjct: 369 PMLAQLVGLSLSVEPGQACYIPVAHRGPDVSGLDAAGQLSREAVLARMKPWLEDAARKKV 428 Query: 407 GQHLKYDSHIFANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCG 466 GQHLKYD+H+FAN+G+ L G+ HDT+L+SYV SHR H MD+LA R L KTITY EVCG Sbjct: 429 GQHLKYDAHVFANHGIALRGIAHDTMLQSYVLASHRNHGMDALAERVLHLKTITYEEVCG 488 Query: 467 KGASQIGFNEVAIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQ 526 KGASQIGF+EV ++RATEYAAEDA++TL LH+A++P++ DDKLR++YE+IE+PTS+VLQ Sbjct: 489 KGASQIGFDEVPLDRATEYAAEDADITLRLHRALYPKVAEDDKLRYVYEQIEMPTSIVLQ 548 Query: 527 KIERNGVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPV 586 K+ERNGVLID+ERL +QS LG+R+LE+EQQAY LAGQPFNLNSPKQ+GEI F +L+LPV Sbjct: 549 KMERNGVLIDAERLARQSTGLGQRLLELEQQAYALAGQPFNLNSPKQIGEIFFTQLKLPV 608 Query: 587 VKKTASGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTN 646 +KKTASGAPSTDEEVLQKLAEDYPLPK+LLD+RGLAKLKSTYTDKLPKMVNP TGRVHT Sbjct: 609 IKKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLKSTYTDKLPKMVNPQTGRVHTT 668 Query: 647 YAQAVAVTGRLSSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHIS 706 Y QA AVTGRL+S DPNLQNIP+RT EGRRIREAFVAP GSVIVSADYSQIELRIMAH+S Sbjct: 669 YGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFVAPAGSVIVSADYSQIELRIMAHLS 728 Query: 707 EDENMLKAFANNEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLG 766 EDE +L+AF +D+HRATAAE+FG+ P +V +EQRRYAKVINFGLIYGMSAFGLASNLG Sbjct: 729 EDEGLLRAFREGQDVHRATAAEVFGVTPLEVTAEQRRYAKVINFGLIYGMSAFGLASNLG 788 Query: 767 IERAAAQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQG 826 I R AA++YID+YF R+ GV RYMDETRL A RGYVETVFGRRLWLP+IN NGPRRQ Sbjct: 789 IGRDAAKLYIDRYFARYPGVARYMDETRLVAHERGYVETVFGRRLWLPDINGGNGPRRQA 848 Query: 827 AERAAINAPMQGTAADLIKMAMIAVQDWLETN--------SLQTRMIMQVHDELVLEVPQ 878 AERAAINAPMQGTAADLIK++M+AVQDWL+ + ++TR +MQVHDELVLEVPQ Sbjct: 849 AERAAINAPMQGTAADLIKLSMLAVQDWLDGSPSAGKPGAPMRTRQVMQVHDELVLEVPQ 908 Query: 879 QELEVVREKLPELMKNVAELKVPLLAEVGIGKNWDEAH 916 +EL +VRE+LPELM VA L+VPL+AEVG+G NW+EAH Sbjct: 909 EELSLVRERLPELMCGVASLRVPLVAEVGVGANWEEAH 946 >B3R5F3.1 B3R5F3_CUPTR DNA polymerase A; 5'->3' exonuclease ; 3'->5' polymerase ; 3'->5' exonuclease EC=2.7.7.7 Length = 939 Score = 1338 bits (3462), Expect = 0.0, Method: Compositional matrix adjust. Identities = 660/933 (70%), Positives = 755/933 (80%), Gaps = 18/933 (1%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 60 LLLVDGSSYLYRA+HALPD+RN EG PTGA+YG+INMLR+LRNDYPA Y ACVFDAKGKT Sbjct: 8 LLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACVFDAKGKT 67 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRDDLYP YK R SMPEDLA QIEPIH AVRALGWPI++V+G+EADDVIGTLS QA Sbjct: 68 FRDDLYPAYKEHRPSMPEDLARQIEPIHEAVRALGWPIVVVDGVEADDVIGTLSRQAMEQ 127 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 G+ T+VSTGDKD+AQLVNEHVTLVNTMS EVLD GV AKFGVPPERI+DYLSLIGD VD Sbjct: 128 GVRTVVSTGDKDLAQLVNEHVTLVNTMSGEVLDPPGVLAKFGVPPERIIDYLSLIGDAVD 187 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGV K GPKTAVKWL +GSLDGVMA A I GVVGENLR L+WLP R LVTVKTD Sbjct: 188 NVPGVPKVGPKTAVKWLAEHGSLDGVMAAASGIKGVVGENLRNTLEWLPMARRLVTVKTD 247 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRE-----LSDGAEAGASKAPMVG 295 CDLS ++ +L +DK+ L F RY F+TWLRE L D ++A Sbjct: 248 CDLSKSVAD-FHALRETGEDKEQLVAFFQRYGFKTWLREATGESLPDARAQARARAATSA 306 Query: 296 ASAAAALEAPAQGGLFAAAP-------KVEYETVLTDAQLDQWIATINAAELTAVDTETT 348 + +APA A P ++ YETV T L+ W+ I +A L A+DTETT Sbjct: 307 PAQGGLFDAPAPSAGDGAPPADDAAPTEIRYETVTTPGMLEDWLRRIESAPLVAIDTETT 366 Query: 349 SLEAMQAELVGISLCCEPGRAAYIPVAHNYQDAPV-----QLSRQHVLEKLKPWLEDASK 403 SL+ MQA+LVGISL PG A YIPVAH D QLSR+ VLE+++ WLEDAS+ Sbjct: 367 SLDPMQAQLVGISLSAAPGEACYIPVAHRGPDVAGLPEHGQLSREFVLERMRAWLEDASR 426 Query: 404 PKLGQHLKYDSHIFANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAE 463 PKLGQ+LKYD H+FAN+G++L GV HDT+L+SYV SHR H MDSLA R L KTITY E Sbjct: 427 PKLGQNLKYDIHVFANHGIKLRGVAHDTMLQSYVLASHRNHGMDSLAERLLSLKTITYEE 486 Query: 464 VCGKGASQIGFNEVAIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSV 523 VCGKGASQIGF+++ + RATEYAAEDA+VTL LH+ M+PQ+E LR +YE+IE+P SV Sbjct: 487 VCGKGASQIGFDQIDLARATEYAAEDADVTLRLHRRMFPQVEAAAGLRRVYEEIEMPVSV 546 Query: 524 VLQKIERNGVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLE 583 VLQK+ERNGVLID+ERL QS +LG+RML +EQ AY+ AGQPFNL SPKQ+GEILF +++ Sbjct: 547 VLQKVERNGVLIDAERLAAQSAELGQRMLALEQSAYEAAGQPFNLGSPKQIGEILFNQMK 606 Query: 584 LPVVKKTASGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRV 643 LPVVKKTASGAPSTDEEVLQKLAEDYPLPK+LLDYRGL+KLKSTYTDKLPKMVNP TGRV Sbjct: 607 LPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLSKLKSTYTDKLPKMVNPRTGRV 666 Query: 644 HTNYAQAVAVTGRLSSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMA 703 HT+Y QA AVTGRL+S +PNLQNIP+RT EGRRIREAF+A GSVIVSADYSQIELRIMA Sbjct: 667 HTSYGQATAVTGRLASTEPNLQNIPVRTDEGRRIREAFIAEPGSVIVSADYSQIELRIMA 726 Query: 704 HISEDENMLKAFANNEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLAS 763 HIS DEN+L+AFAN EDIHRATAAEIFG+ + V SEQRRYAKVINFGLIYGMSAFGLAS Sbjct: 727 HISGDENLLRAFANGEDIHRATAAEIFGVERDAVSSEQRRYAKVINFGLIYGMSAFGLAS 786 Query: 764 NLGIERAAAQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPR 823 NLGIER AA+ YID+YFMR+ GV YM+ETR A+ +GYVETVFGRRLWLP+IN +GPR Sbjct: 787 NLGIERDAARHYIDRYFMRYPGVAHYMEETRQTAREQGYVETVFGRRLWLPDINGGSGPR 846 Query: 824 RQGAERAAINAPMQGTAADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELEV 883 RQ AERAAINAPMQGTAADLIK++MIAVQDWLE + LQTR IMQVHDELVLEVP+ ELE+ Sbjct: 847 RQAAERAAINAPMQGTAADLIKLSMIAVQDWLERDGLQTRQIMQVHDELVLEVPEHELEL 906 Query: 884 VREKLPELMKNVAELKVPLLAEVGIGKNWDEAH 916 V+ +LPELM VAEL+VPL+AEVG G NW+EAH Sbjct: 907 VKARLPELMCTVAELRVPLVAEVGSGANWEEAH 939 >D8P0V6.1 D8P0V6_RALSO DNA polymerase I (POL I) EC=2.7.7.7 Length = 944 Score = 1336 bits (3458), Expect = 0.0, Method: Compositional matrix adjust. Identities = 649/938 (69%), Positives = 769/938 (81%), Gaps = 23/938 (2%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 60 LLLVDGSSYLYRA+HALPD+RN EG PTGA+YGI+NMLR+LRNDYPA Y ACVFDAKGKT Sbjct: 8 LLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACVFDAKGKT 67 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRD+LYP YK R MP+DL QIEPIH AVRALGWPIL+V+G+EADDVIGTL+ +A Sbjct: 68 FRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILVVDGVEADDVIGTLTERAARE 127 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 G+ T+VSTGDKD+AQLVN+HVTLVNTMSNE LD AGV AKFGVPPE+IVDYLSLIGDTVD Sbjct: 128 GIRTVVSTGDKDLAQLVNDHVTLVNTMSNETLDPAGVLAKFGVPPEKIVDYLSLIGDTVD 187 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGV K GPKTAVKWL YGSLD V+A A +I GVVGENLR LDWLP+GR L+TVK D Sbjct: 188 NVPGVPKVGPKTAVKWLGEYGSLDNVIARAGEIKGVVGENLRNTLDWLPKGRELLTVKID 247 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRE-----LSDGAEAGAS-KAPMV 294 CDL+ + + LE+L +D+ L + F+RY F+TWLRE L D GA+ KA Sbjct: 248 CDLATEVPT-LEALVDGGEDRAKLVDFFSRYGFKTWLREAAGESLPDTRSVGAARKAATP 306 Query: 295 GASAAAALEAPAQGGLF---AAAPKVEYETVLTDAQLDQWIATINAAELTAVDTETTSLE 351 A A Q LF +V+YETV T+AQL+ W+ ++ EL +DTETTS++ Sbjct: 307 VKQYAPEAAAQQQASLFDVETPPAEVKYETVTTEAQLESWMRLLDTVELVCIDTETTSID 366 Query: 352 AMQAELVGISLCCEPGRAAYIPVAHNYQDAP-----VQLSRQHVLEKLKPWLEDASKPKL 406 M A+LVGISL +PG+A YIPVAH D QLSR+ VL ++K WLED ++ K+ Sbjct: 367 PMLAQLVGISLSVQPGQACYIPVAHRGPDVSGLDNAAQLSREAVLARMKLWLEDETRKKV 426 Query: 407 GQHLKYDSHIFANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAEVCG 466 GQHLKYD+H+FAN+G+ L G+ HDT+L+SYV SHR H MD+LA R L KTITY EVCG Sbjct: 427 GQHLKYDAHVFANHGIALRGIAHDTMLQSYVLASHRNHGMDALAERVLHLKTITYEEVCG 486 Query: 467 KGASQIGFNEVAIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSVVLQ 526 KGA+QIGF+EVA++RATEYAAEDA++TL LH+A++P++ DDKLR++YE+IE+PTS+VLQ Sbjct: 487 KGAAQIGFDEVALDRATEYAAEDADITLRLHRALYPKVTEDDKLRYVYEQIEMPTSIVLQ 546 Query: 527 KIERNGVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLELPV 586 K+ERNGVL+D+ERL +QS +LG+R+LE+EQQA+ LAGQPFNLNSPKQ+GE+ F +L+LPV Sbjct: 547 KMERNGVLVDAERLARQSAELGQRLLELEQQAFALAGQPFNLNSPKQIGELFFTQLKLPV 606 Query: 587 VKKTASGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRVHTN 646 VKKTASGAPSTDEEVLQKLAEDYPLPK+LLD+RGLAKLKSTYTDKLPKMVNP TGRVHT Sbjct: 607 VKKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLKSTYTDKLPKMVNPQTGRVHTT 666 Query: 647 YAQAVAVTGRLSSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMAHIS 706 Y QA AVTGRL+S DPNLQNIP+RT EGRRIREAFVAP GSVIVSADYSQIELRIMAH+S Sbjct: 667 YGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFVAPAGSVIVSADYSQIELRIMAHLS 726 Query: 707 EDENMLKAFANNEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLASNLG 766 EDE +++AF +D+HRATAAE+FG+ P +V +EQRRYAKVINFGLIYGMSAFGLASNLG Sbjct: 727 EDEGLMRAFREGQDVHRATAAEVFGVTPLEVTAEQRRYAKVINFGLIYGMSAFGLASNLG 786 Query: 767 IERAAAQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPRRQG 826 I R AA++YID+YF R+ GV RYMDETR A RGYVETVFGRRLWLP+IN NGPRRQ Sbjct: 787 IGRDAAKLYIDRYFARYPGVARYMDETRQVAHERGYVETVFGRRLWLPDINGGNGPRRQA 846 Query: 827 AERAAINAPMQGTAADLIKMAMIAVQDWLETN--------SLQTRMIMQVHDELVLEVPQ 878 AERAAINAPMQGTAADLIK++M+AVQDWLE + ++TR++MQVHDELVLEVPQ Sbjct: 847 AERAAINAPMQGTAADLIKLSMLAVQDWLEGSPNAGKPGVPMRTRLVMQVHDELVLEVPQ 906 Query: 879 QELEVVREKLPELMKNVAELKVPLLAEVGIGKNWDEAH 916 EL VRE+LPELM +VA L+VPL+AEVG+G NW+EAH Sbjct: 907 DELARVRERLPELMCDVASLRVPLVAEVGVGSNWEEAH 944 >Q1LK25.1 Q1LK25_RALME Fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ; 3'->5' exonuclease EC=2.7.7.7 Length = 934 Score = 1336 bits (3457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 660/933 (70%), Positives = 764/933 (81%), Gaps = 23/933 (2%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 60 LLLVDGSSYLYRA+HALPD+RN EG PTGA+YG+INMLR+LRNDYPA Y+ACVFDAKGKT Sbjct: 8 LLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAQYIACVFDAKGKT 67 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRDD+YP YK R SMPEDLA QIEPIH AVRALGWPI++VEG+EADDVIGTL++QA+ Sbjct: 68 FRDDMYPAYKEHRPSMPEDLAKQIEPIHEAVRALGWPIVVVEGVEADDVIGTLALQASQQ 127 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 G++T+VSTGDKD+AQLVN+ VTLVNTMS EVLD GV AKFGVPPERIVDYLSLIGD VD Sbjct: 128 GVNTVVSTGDKDLAQLVNDTVTLVNTMSGEVLDPPGVVAKFGVPPERIVDYLSLIGDAVD 187 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGV K GPKTAVKWLT YG+LD +M NA+KI GVVGENLR L+WLP+ R LVTVKTD Sbjct: 188 NVPGVPKVGPKTAVKWLTEYGTLDDIMGNAEKIKGVVGENLRNTLEWLPRARELVTVKTD 247 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGASAAA 300 CDLS ++ ++L +DK+ L F RY F++WLRE + G S A+ A Sbjct: 248 CDLSGAVAD-FQALHDLGEDKEKLIAFFQRYGFKSWLREAT-----GESLPNARAAARAV 301 Query: 301 ALEAPAQGGLFAAA------------PKVEYETVLTDAQLDQWIATINAAELTAVDTETT 348 APAQGGLF A ++ YETV T+A LD+W+ I A + A+DTETT Sbjct: 302 PKAAPAQGGLFDAPAQADAPAEDVPPAEIRYETVTTEAALDEWLRKIADAPIVAIDTETT 361 Query: 349 SLEAMQAELVGISLCCEPGRAAYIPVAHNYQDAPV-----QLSRQHVLEKLKPWLEDASK 403 SL+ M A+LVGISL EPG AAYIPVAH D QLSR++VLE+++ WLED ++ Sbjct: 362 SLDPMLAQLVGISLSVEPGAAAYIPVAHRGPDVAGLENHGQLSREYVLERMRGWLEDPAR 421 Query: 404 PKLGQHLKYDSHIFANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTITYAE 463 PKLGQHLKYDSH+FAN+GV L G+ HDT+LESYV S+R H MDSLA R L KTITY E Sbjct: 422 PKLGQHLKYDSHVFANHGVALRGIAHDTMLESYVLASYRNHGMDSLAERLLSLKTITYEE 481 Query: 464 VCGKGASQIGFNEVAIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEVPTSV 523 VCGKGA+QIGF+++ + RATEYAAEDA+VTL LH+ M PQ+E + L+++YE+IE+P SV Sbjct: 482 VCGKGANQIGFDQIDLPRATEYAAEDADVTLRLHRKMQPQLEASEGLKYVYEQIEIPVSV 541 Query: 524 VLQKIERNGVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILFGKLE 583 VLQKIERNGVLID++RL QS +LG RM+++E+ A+D AGQPFNL SPKQ+GEILF +++ Sbjct: 542 VLQKIERNGVLIDADRLAAQSAELGLRMMDLERAAHDAAGQPFNLGSPKQIGEILFNQMK 601 Query: 584 LPVVKKTASGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPATGRV 643 LPVVKKTASGAPSTDEEVLQKLA+DYPLPK+LLDYRGL+KLKSTYTDKLPKMVNP TGRV Sbjct: 602 LPVVKKTASGAPSTDEEVLQKLADDYPLPKLLLDYRGLSKLKSTYTDKLPKMVNPNTGRV 661 Query: 644 HTNYAQAVAVTGRLSSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIELRIMA 703 HT+Y QA AVTGRL+S DPNLQNIP+RT EGRRIREAF+A G+VIVSADYSQIELRIMA Sbjct: 662 HTSYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAAPGNVIVSADYSQIELRIMA 721 Query: 704 HISEDENMLKAFANNEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAFGLAS 763 HIS DEN+L+AFAN EDIHRATA EIFG+ E V SEQRRYAKVINFGLIYGMSAFGLAS Sbjct: 722 HISGDENLLRAFANGEDIHRATAGEIFGVEREAVSSEQRRYAKVINFGLIYGMSAFGLAS 781 Query: 764 NLGIERAAAQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSPNGPR 823 NLGIER AA+ YID+YFMR+ GV YM++TR A+ +GYVETVFGRRLWLP+IN NGPR Sbjct: 782 NLGIEREAAKHYIDRYFMRYPGVAHYMEQTRQTAREQGYVETVFGRRLWLPDINGGNGPR 841 Query: 824 RQGAERAAINAPMQGTAADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQELEV 883 RQ AERAAINAPMQGTAADLIK++MIAVQDWLE L TR IMQVHDELVLEVPQ ELE+ Sbjct: 842 RQAAERAAINAPMQGTAADLIKLSMIAVQDWLEGERLGTRQIMQVHDELVLEVPQAELEL 901 Query: 884 VREKLPELMKNVAELKVPLLAEVGIGKNWDEAH 916 VR KLPELM VA L VPL+AEVG G NW+EAH Sbjct: 902 VRVKLPELMCAVATLNVPLVAEVGSGANWEEAH 934 >Q0K851.1 Q0K851_CUPNH DNA polymerase I EC=2.7.7.7 Length = 938 Score = 1335 bits (3454), Expect = 0.0, Method: Compositional matrix adjust. Identities = 666/937 (71%), Positives = 762/937 (81%), Gaps = 27/937 (2%) Query: 1 LLLVDGSSYLYRAFHALPDMRNAEGAPTGALYGIINMLRRLRNDYPASYVACVFDAKGKT 60 LLLVDGSSYLYRA+HALPD+RN EG PTGA+YG+INMLR+LRNDYPA Y ACVFDAKGKT Sbjct: 8 LLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACVFDAKGKT 67 Query: 61 FRDDLYPDYKATRKSMPEDLALQIEPIHAAVRALGWPILMVEGIEADDVIGTLSVQATAA 120 FRDD+YP YK R SMPEDLA QIEPIH AVRA+GWPI++V+G+EADDVIGTLS QAT Sbjct: 68 FRDDMYPAYKEHRPSMPEDLARQIEPIHEAVRAMGWPIVVVDGVEADDVIGTLSRQATEQ 127 Query: 121 GLDTIVSTGDKDMAQLVNEHVTLVNTMSNEVLDIAGVTAKFGVPPERIVDYLSLIGDTVD 180 G+ T+VSTGDKD+AQLVN+ VTLVNTMS EVLD GV AKFGVPPERI+DYLSLIGD VD Sbjct: 128 GVRTVVSTGDKDLAQLVNDQVTLVNTMSGEVLDPPGVVAKFGVPPERIIDYLSLIGDAVD 187 Query: 181 NVPGVEKCGPKTAVKWLTAYGSLDGVMANADKISGVVGENLRRALDWLPQGRVLVTVKTD 240 NVPGV K GPKTAVKWL +GSLDGV+A A I GVVGENLR LDWLP R LVTVKTD Sbjct: 188 NVPGVPKVGPKTAVKWLAEHGSLDGVIAAAPGIKGVVGENLRNTLDWLPMARQLVTVKTD 247 Query: 241 CDLSAHMSSILESLTMQPQDKDVLKELFTRYNFRTWLRELSDGAEAGASKAPMVGASAAA 300 CDLSA ++ +L +DKD L F+RY F+TWLRE + G S + A Sbjct: 248 CDLSAAVAD-FHALRETGEDKDKLVAFFSRYGFKTWLREAT-----GESLPDARAQARAR 301 Query: 301 ALEAPAQGGLF----------------AAAPKVEYETVLTDAQLDQWIATINAAELTAVD 344 A APAQGGLF AA ++ Y+TV T+AQL+ W+ I AA L A+D Sbjct: 302 AAAAPAQGGLFDVPATAGAAEAPAADQAAPTEIRYDTVSTEAQLEDWMRRIEAAPLVAID 361 Query: 345 TETTSLEAMQAELVGISLCCEPGRAAYIPVAHNYQDAPV-----QLSRQHVLEKLKPWLE 399 TETTSL+ MQA+LVGISL EPG A YIPVAH D QLSR+ VL +++ WLE Sbjct: 362 TETTSLDPMQAQLVGISLSVEPGVACYIPVAHRGPDVAGLPDHGQLSREFVLGRMRAWLE 421 Query: 400 DASKPKLGQHLKYDSHIFANYGVRLAGVQHDTLLESYVFESHRPHDMDSLAARHLERKTI 459 DAS+PKLGQ+LKYD H+FAN+GV+L GV HDT+L+SYV SHR H MDSLA R L KTI Sbjct: 422 DASRPKLGQNLKYDVHVFANHGVKLRGVAHDTMLQSYVLASHRNHGMDSLAERLLSLKTI 481 Query: 460 TYAEVCGKGASQIGFNEVAIERATEYAAEDAEVTLALHQAMWPQIEHDDKLRFIYEKIEV 519 TY EVCGKGASQIGF+++ + RATEYAAEDA+VTL LH+ M+PQ+E LR +YE+IE+ Sbjct: 482 TYEEVCGKGASQIGFDQIDLARATEYAAEDADVTLRLHRKMFPQVEAAAGLRRVYEEIEM 541 Query: 520 PTSVVLQKIERNGVLIDSERLGQQSHDLGKRMLEIEQQAYDLAGQPFNLNSPKQLGEILF 579 P SVVLQK+ERNGVLID+ERL QS +LG+RML +EQ AY+ AGQPFNL SPKQ+GEILF Sbjct: 542 PVSVVLQKVERNGVLIDAERLAAQSAELGQRMLALEQAAYEAAGQPFNLGSPKQIGEILF 601 Query: 580 GKLELPVVKKTASGAPSTDEEVLQKLAEDYPLPKVLLDYRGLAKLKSTYTDKLPKMVNPA 639 +++LPVVKKTASGAPSTDEEVLQKLAEDYPLPK+LLDYRGLAKLKSTYTDKLPKMVNP Sbjct: 602 SQMKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMVNPQ 661 Query: 640 TGRVHTNYAQAVAVTGRLSSNDPNLQNIPIRTAEGRRIREAFVAPEGSVIVSADYSQIEL 699 TGRVHT+Y QA AVTGRL+S +PNLQNIP+RT EGRRIREAF+A GSVIVSADYSQIEL Sbjct: 662 TGRVHTSYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIAEPGSVIVSADYSQIEL 721 Query: 700 RIMAHISEDENMLKAFANNEDIHRATAAEIFGIAPEQVESEQRRYAKVINFGLIYGMSAF 759 RIMAHIS DEN+L+AFAN EDIHRATA EIFG+ E V SEQRRYAKVINFGLIYGMSAF Sbjct: 722 RIMAHISGDENLLRAFANGEDIHRATAGEIFGVEREAVSSEQRRYAKVINFGLIYGMSAF 781 Query: 760 GLASNLGIERAAAQMYIDKYFMRFSGVKRYMDETRLQAKARGYVETVFGRRLWLPEINSP 819 GLA NLGIER AA+ YID+YFMR+ GV YM+ETR A+ +GYVETVFGRRLWLP+IN Sbjct: 782 GLAGNLGIEREAAKHYIDRYFMRYPGVAHYMEETRQTAREQGYVETVFGRRLWLPDINGG 841 Query: 820 NGPRRQGAERAAINAPMQGTAADLIKMAMIAVQDWLETNSLQTRMIMQVHDELVLEVPQQ 879 +GPRRQ AERAAINAPMQGTAADLIK++MIAVQ WLE + LQTR IMQVHDELVLEVP+ Sbjct: 842 SGPRRQAAERAAINAPMQGTAADLIKLSMIAVQGWLERDGLQTRQIMQVHDELVLEVPEH 901 Query: 880 ELEVVREKLPELMKNVAELKVPLLAEVGIGKNWDEAH 916 ELE+V+ +LPELM +VA+L+VPL+AEVG G NW+EAH Sbjct: 902 ELELVKVRLPELMCSVAQLRVPLVAEVGSGANWEEAH 938