BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0024.p (256 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J227.1 D8J227_HERSS GntR family transcription regulator protein 514 e-144 E6V9I0.1 E6V9I0_VARPD GntR domain protein 231 7e-59 C9YAX9.1 C9YAX9_9BURK Putative uncharacterized protein 229 3e-58 Q125D5.1 Q125D5_POLSJ Transcriptional regulator, GntR family 227 1e-57 E3HXK1.1 E3HXK1_ACHXA Bacterial regulatory protein, GntR family ... 215 4e-54 C5CMD9.1 C5CMD9_VARPS GntR domain protein 212 4e-53 A1WI44.1 A1WI44_VEREI Transcriptional regulator, GntR family 211 7e-53 Q89F66.1 Q89F66_BRAJA Transcriptional regulatory protein 203 2e-50 A9I6E0.1 A9I6E0_BORPD Transcriptional regulator, GntR-family 201 6e-50 A1VP06.1 A1VP06_POLNA Transcriptional regulator, GntR family 201 7e-50 >D8J227.1 D8J227_HERSS GntR family transcription regulator protein Length = 256 Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust. Identities = 256/256 (100%), Positives = 256/256 (100%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV Sbjct: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 Query: 61 EGHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIA 120 EGHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIA Sbjct: 61 EGHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIA 120 Query: 121 AVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHS 180 AVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHS Sbjct: 121 AVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHS 180 Query: 181 HFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSANLIREYGDRVQQQ 240 HFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSANLIREYGDRVQQQ Sbjct: 181 HFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSANLIREYGDRVQQQ 240 Query: 241 ERPRKRAVRKSDTQLK 256 ERPRKRAVRKSDTQLK Sbjct: 241 ERPRKRAVRKSDTQLK 256 >E6V9I0.1 E6V9I0_VARPD GntR domain protein Length = 235 Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 123/231 (53%), Positives = 157/231 (67%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 MP++ +EPQRLYRQI+DQLR LI +GEFAVG+RL +ERDLA QLGVSRPS+REALIALEV Sbjct: 1 MPLQTVEPQRLYRQIADQLRALIAKGEFAVGARLSAERDLAKQLGVSRPSVREALIALEV 60 Query: 61 EGHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIA 120 EG +EVR GSG+YV R +E GPLELIRAR +IEGE A AA G ++ + Sbjct: 61 EGWVEVRTGSGVYVLDRSHRAPAPVAPTEWGPLELIRARRVIEGETAAIAAAAGKRKDVD 120 Query: 121 AVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHS 180 A+ A LM A + PLE DR FH+ + A+GN+VLV V +D+R GP+F RL Sbjct: 121 AMSRAIELMREMADRNVMPLEGDRAFHLAIVNASGNTVLVETVQNFWDSRKGPIFTRLGG 180 Query: 181 HFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSANLIR 231 +F+ W+ AI EH + +A+ R+ E ARAAM HMD + R+SA+ R Sbjct: 181 YFENVPSWRSAIVEHEAIRDAVAARDAEGARAAMHAHMDKSHQRFSASWRR 231 >C9YAX9.1 C9YAX9_9BURK Putative uncharacterized protein Length = 273 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 122/228 (53%), Positives = 160/228 (70%), Gaps = 3/228 (1%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 MP + IEP+RLYRQI+DQLR+LI GEFAVGS+LP+ERDLA ++GVSRPS+REALIALEV Sbjct: 42 MPFQPIEPRRLYRQIADQLRQLIQTGEFAVGSKLPAERDLATKMGVSRPSVREALIALEV 101 Query: 61 EGHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIA 120 EG IEVRMGSGI V + RE L + GPLE+IRAR++IE E+A AA+ + Sbjct: 102 EGLIEVRMGSGIVV---IARESVRMLDNAPGPLEIIRARQLIECELAALAAKSTDPTLVP 158 Query: 121 AVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHS 180 + E M ++ A P+ DR FHIR+A+A+ NS L +VTQLFD R GPLF++L Sbjct: 159 DLLETLRDMEADIAARTLPIRGDRAFHIRIAQASDNSALQAVVTQLFDERNGPLFQKLGG 218 Query: 181 HFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSAN 228 HF+ W+ A+DEH V++A+ +P+ ARAAM H+D + R+SA Sbjct: 219 HFEREATWKAAVDEHRAVVDAIAAHDPDMARAAMSGHLDHSHERFSAG 266 >Q125D5.1 Q125D5_POLSJ Transcriptional regulator, GntR family Length = 269 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 128/235 (54%), Positives = 162/235 (68%), Gaps = 4/235 (1%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 MPI+ +EPQRLYRQI++QLR LI +GEFA G RLP+ERDLA QLGVSRPS+REALIALEV Sbjct: 31 MPIQTVEPQRLYRQIAEQLRSLISKGEFAAGKRLPAERDLAKQLGVSRPSVREALIALEV 90 Query: 61 EGHIEVRMGSGIYV---CPPVQRERRIDL-SSEEGPLELIRAREMIEGEVAYAAAQHGSK 116 EG +EVR GSG+YV VQR+ + S+E GPLELIRAR ++EGE+A AA + Sbjct: 91 EGWVEVRTGSGVYVLDRSNQVQRKNGPQIASTEWGPLELIRARRVVEGEIASMAAVQAKR 150 Query: 117 QQIAAVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFK 176 + I A+ +A M S+A G+ PLE DR FH + EA GN VL+ V +D+R GPLF Sbjct: 151 KDIDAMRKAIDAMKSDAGRGVLPLEGDRAFHTAIVEACGNVVLIETVQSFWDSRRGPLFT 210 Query: 177 RLHSHFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSANLIR 231 RL +F+ + WQ AIDEH + A+ + ARAAM HMD + TR+SA+ R Sbjct: 211 RLGGYFETMKSWQSAIDEHEAIYAAICAHDGAAARAAMHAHMDKSHTRFSASWRR 265 >E3HXK1.1 E3HXK1_ACHXA Bacterial regulatory protein, GntR family protein 60 Length = 245 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 120/228 (52%), Positives = 153/228 (67%), Gaps = 2/228 (0%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 MPI+ IEP+RLYRQI+DQLR LI GEF VG+RLP ERDLAL+LGVSRPS+REALIALEV Sbjct: 1 MPIQTIEPRRLYRQIADQLRLLIETGEFPVGARLPPERDLALKLGVSRPSVREALIALEV 60 Query: 61 EGHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIA 120 EG +EVRMGSG+YV R ++ E PLE IRAR++IEGE+A AA S + Sbjct: 61 EGWVEVRMGSGVYVQSLAGGPRASLMA--ESPLETIRARQVIEGELAAQAALRNSPALVD 118 Query: 121 AVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHS 180 + EA M A AG P+ DRLFH+R+AE N+VLV +V++LFD R PL +L Sbjct: 119 GLAEAVGTMEDEALAGNVPIRGDRLFHLRVAEMANNAVLVRVVSELFDERHNPLSVKLGD 178 Query: 181 HFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSAN 228 +F+ W AI EH V++A+R + ARAAM H+ + R +A+ Sbjct: 179 YFENPSSWAAAIAEHRKVIDAIRAGDDRGARAAMHHHLACSHDRLTAS 226 >C5CMD9.1 C5CMD9_VARPS GntR domain protein Length = 237 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 125/231 (54%), Positives = 158/231 (68%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 MP++ +EPQRLYRQI+DQLR LI +GEFAVG+RLP+ERDLA QLGVSRPS+REALIALEV Sbjct: 1 MPLQTVEPQRLYRQIADQLRGLIGKGEFAVGARLPAERDLAQQLGVSRPSVREALIALEV 60 Query: 61 EGHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIA 120 EG +EVR GSG+YV R + +E GPLELIRAR +IEGE A AA G ++ I Sbjct: 61 EGWVEVRTGSGVYVLDRSHRASKPVAPTEWGPLELIRARRVIEGETAAIAAAVGKRKDID 120 Query: 121 AVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHS 180 A+ A M A I PLE DR FH+ + A+GN+VLV V +D+R GP+F RL Sbjct: 121 AMSRAIETMRGLADREILPLEGDREFHVAIVNASGNAVLVETVQSFWDSRNGPIFTRLGG 180 Query: 181 HFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSANLIR 231 +F+ W+ AI EH + +A+ R+ E ARAAM HMD + R+SA+ R Sbjct: 181 YFETVASWRSAIAEHEAIRDAVAARDAEAARAAMHAHMDNSHQRFSASWRR 231 >A1WI44.1 A1WI44_VEREI Transcriptional regulator, GntR family Length = 244 Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 117/240 (48%), Positives = 157/240 (65%), Gaps = 9/240 (3%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 MP++ +EPQRLYRQI++QLR LI +G F G+RLP+ERDLA +LGVSRPS+REALIALEV Sbjct: 1 MPLQTVEPQRLYRQIAEQLRALIAQGAFDAGARLPAERDLAQRLGVSRPSVREALIALEV 60 Query: 61 EGHIEVRMGSGIYVCP----PVQRERRIDLS-----SEEGPLELIRAREMIEGEVAYAAA 111 E +EVR+GSG+YV PV + S SE GPLELIRAR ++EGE A AA Sbjct: 61 EDWVEVRIGSGVYVLDRARRPVASAEAVAPSGAVAPSEWGPLELIRARRVVEGETAAIAA 120 Query: 112 QHGSKQQIAAVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARL 171 + G ++ + A+ A A M A+ + PL+ DR FH+ +A A+GN+VLV V +D+R Sbjct: 121 RCGKRKDVDAMSRAIASMHEQAERRVAPLDGDRAFHLAIAGASGNTVLVETVQGFWDSRQ 180 Query: 172 GPLFKRLHSHFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSANLIR 231 GP+F RL +F+ W+ AI EH + +A+ + AR AM HMD + R+S N R Sbjct: 181 GPIFMRLGGYFETVTSWRVAIAEHEAIRDAIAAHDAGAARDAMHAHMDKSHRRFSVNWRR 240 >Q89F66.1 Q89F66_BRAJA Transcriptional regulatory protein Length = 303 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 107/229 (46%), Positives = 152/229 (66%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 +P+EA+E +RLYRQ++DQLR LI GE+AVGSRLP+ER+LA QL VSRP++REALIALEV Sbjct: 31 VPLEAVEARRLYRQVADQLRSLIDSGEYAVGSRLPTERELAEQLKVSRPTVREALIALEV 90 Query: 61 EGHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIA 120 EG + +R+GSGIYV P S EGP EL+RARE +E +A AA+ +K +A Sbjct: 91 EGRLRIRVGSGIYVIEPAAVAAPATASVIEGPFELLRAREFLESAIAEQAARVATKDDVA 150 Query: 121 AVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHS 180 ++ + M + G + DR FH+ +A + GN+VLV +V +LFD RL P F +L Sbjct: 151 RIDASLLAMENVEHPGEASMVHDRAFHVAIAGSLGNAVLVRVVGELFDQRLNPYFAQLAH 210 Query: 181 HFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSANL 229 +F+ W+ A+DEH V +A+ +P+ AR AMR+H+ + R++ N Sbjct: 211 YFENPGTWRTALDEHRAVRDAIAAHDPDAAREAMRKHLARSQERFAQNF 259 >A9I6E0.1 A9I6E0_BORPD Transcriptional regulator, GntR-family Length = 234 Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 121/229 (52%), Positives = 155/229 (67%), Gaps = 6/229 (2%) Query: 1 MPIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEV 60 MP + IEP+RLYRQI+DQLR LI GEF VG+RLP ERDLAL+LGVSRPS+REALIALEV Sbjct: 1 MPFQPIEPRRLYRQIADQLRVLIQAGEFPVGARLPPERDLALKLGVSRPSVREALIALEV 60 Query: 61 EGHIEVRMGSGIYVCPPVQRERRI-DLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQI 119 EG +EVRMGSGIYV R R D E PLE IRAR+++EGE+A AA+ Q+ Sbjct: 61 EGLVEVRMGSGIYV-----RSRDAADSVVAESPLETIRARQLVEGELAAQAAELAQPAQV 115 Query: 120 AAVEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLH 179 + EA M A+AG P++ DR+FH+R+AE NSVL+ +V +LFD R PL +L Sbjct: 116 TGLREALQAMREEAEAGQVPIQGDRMFHLRIAEIANNSVLLRVVGELFDERHNPLSVKLG 175 Query: 180 SHFDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRYSAN 228 +F+ W+ AI EH V+EA+ + +AR AMR H+ + R +AN Sbjct: 176 DYFENPASWKAAIAEHGKVIEAIAAGDAARAREAMRHHLSCSHDRLTAN 224 >A1VP06.1 A1VP06_POLNA Transcriptional regulator, GntR family Length = 255 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 143/224 (63%) Query: 2 PIEAIEPQRLYRQISDQLRKLIVEGEFAVGSRLPSERDLALQLGVSRPSLREALIALEVE 61 P+ +E +RLY+QI+D++R LI G + GSRLP ERDLA QLGVSRPSLREALIALE+E Sbjct: 29 PLRQVETRRLYQQIADRVRTLIQRGNYPAGSRLPPERDLAQQLGVSRPSLREALIALEIE 88 Query: 62 GHIEVRMGSGIYVCPPVQRERRIDLSSEEGPLELIRAREMIEGEVAYAAAQHGSKQQIAA 121 G +E+RMGSG+YVC R + ++ E P EL++AR +EG VA A + + + +A Sbjct: 89 GSVEIRMGSGVYVCSRALRRPGLAVAMGESPAELMQARSAVEGAVASLACANVTPEGLAR 148 Query: 122 VEEAYALMISNAQAGIDPLEADRLFHIRLAEATGNSVLVGLVTQLFDARLGPLFKRLHSH 181 V+ A M + G D LE DR FH+ +AE +GNSVL LV LFD R PL + + Sbjct: 149 VQAAVEAMREDIAMGRDVLEHDRQFHVCIAEMSGNSVLASLVGTLFDERQSPLASHMRNR 208 Query: 182 FDGTRVWQEAIDEHALVMEALRQRNPEQARAAMRRHMDIAFTRY 225 +G + W A+ EH ++ L QR+P A +AMR H+ A R+ Sbjct: 209 LEGQQTWHAALSEHEQILRCLAQRDPLAAESAMRSHIRAAADRW 252