BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0095.p (112 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0W8.1 D8J0W8_HERSS Rieske (2Fe-2S) domain protein EC=2.7.1.50 225 2e-57 A4JED6.1 A4JED6_BURVG Rieske (2Fe-2S) domain protein 116 1e-24 B8KHQ6.1 B8KHQ6_9GAMM Rieske (2Fe-2S) domain protein 111 4e-23 F2K4S0.1 F2K4S0_9GAMM Rieske (2Fe-2S) iron-sulfur domain 107 7e-22 B9C5N0.1 B9C5N0_9BURK Rieske [2Fe-2S] domain protein 105 2e-21 B9BLM6.1 B9BLM6_9BURK Rieske [2Fe-2S] domain protein 105 2e-21 A6W021.1 A6W021_MARMS Rieske (2Fe-2S) domain protein 105 2e-21 D5WI65.1 D5WI65_BURSC Rieske (2Fe-2S) iron-sulfur domain protein 105 3e-21 Q0BVI0.1 Q0BVI0_GRABC Rieske (2Fe-2S) domain protein 104 4e-21 A4YU96.1 A4YU96_BRASO Putative uncharacterized protein 101 3e-20 >D8J0W8.1 D8J0W8_HERSS Rieske (2Fe-2S) domain protein EC=2.7.1.50 Length = 112 Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 111/112 (99%), Positives = 111/112 (99%) Query: 1 MYLCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHHGTPLPGRRDAYFDG 60 MYLCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHHGTPLP RRDAYFDG Sbjct: 1 MYLCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHHGTPLPWRRDAYFDG 60 Query: 61 TGQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHVDAGDPL 112 TGQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHVDAGDPL Sbjct: 61 TGQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHVDAGDPL 112 >A4JED6.1 A4JED6_BURVG Rieske (2Fe-2S) domain protein Length = 123 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/103 (53%), Positives = 72/103 (69%), Gaps = 1/103 (0%) Query: 1 MYLCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHHG-TPLPGRRDAYFD 59 + L + LP+ GARGFD + G+ TIFV+RRG+Q+ AWRD+CPH G TP+ R+DAY + Sbjct: 8 VRLASVADLPDPGARGFDPDGTGRDTIFVVRRGEQLHAWRDACPHFGDTPMAWRKDAYLN 67 Query: 60 GTGQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDG 102 G +VC AHGA FD +GVC LGPC G L AVP+ + +DG Sbjct: 68 GDATRIVCHAHGAQFDMASGVCLLGPCLGQRLIAVPIEVTEDG 110 >B8KHQ6.1 B8KHQ6_9GAMM Rieske (2Fe-2S) domain protein Length = 131 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 52/106 (49%), Positives = 72/106 (67%), Gaps = 1/106 (0%) Query: 3 LCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHHGT-PLPGRRDAYFDGT 61 LCHI +L E+ A+GFD GQA++FV+++ + A+RD CPH+GT PLP +++ Y D Sbjct: 23 LCHIAELRESRAQGFDPFREGQASLFVVKKDTSLYAYRDRCPHYGTTPLPWKKNEYLDKA 82 Query: 62 GQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHVD 107 G +VCAAHGA FD TG+C GPC G +L+A+ L + DG L D Sbjct: 83 GDVIVCAAHGARFDITTGICISGPCLGQSLSAIALHVRRDGQLVAD 128 >F2K4S0.1 F2K4S0_9GAMM Rieske (2Fe-2S) iron-sulfur domain Length = 125 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 1/106 (0%) Query: 2 YLCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPH-HGTPLPGRRDAYFDG 60 +LCHI ++ + ++GF GQ IF++++ D++ W+++CPH G P+ R+D Y + Sbjct: 10 FLCHIDEIENDSSKGFIENENGQDAIFIVKKNDKLYGWKNACPHVQGAPMAWRKDQYLNT 69 Query: 61 TGQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHV 106 HL C AHGALF+P TG+C GPC G TL V L + +G + + Sbjct: 70 QKTHLTCFAHGALFEPTTGLCIQGPCLGKTLEKVELFVSSEGVISI 115 >B9C5N0.1 B9C5N0_9BURK Rieske [2Fe-2S] domain protein Length = 119 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/104 (51%), Positives = 67/104 (64%), Gaps = 2/104 (1%) Query: 3 LCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHH--GTPLPGRRDAYFDG 60 L I LP+ GARGFD + G T+FV+R G QVRA+RD+CPH TP+ R+DAY G Sbjct: 11 LASIDDLPDPGARGFDPDGRGHDTLFVVRYGTQVRAYRDACPHFFGETPMAWRKDAYLSG 70 Query: 61 TGQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGL 104 G +VC AHGA FD +G C LGPC G LT V + + DDG + Sbjct: 71 DGTRIVCHAHGAQFDIASGECVLGPCLGQRLTPVEIDVTDDGAI 114 >B9BLM6.1 B9BLM6_9BURK Rieske [2Fe-2S] domain protein Length = 119 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/104 (51%), Positives = 67/104 (64%), Gaps = 2/104 (1%) Query: 3 LCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHH--GTPLPGRRDAYFDG 60 L I LP+ GARGFD + G T+FV+R G QVRA+RD+CPH TP+ R+DAY G Sbjct: 11 LASIDDLPDPGARGFDPDGRGHDTLFVVRYGTQVRAYRDACPHFFGETPMAWRKDAYLSG 70 Query: 61 TGQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGL 104 G +VC AHGA FD +G C LGPC G LT V + + DDG + Sbjct: 71 DGTRIVCHAHGAQFDIASGECVLGPCLGQRLTPVEIDVTDDGAI 114 >A6W021.1 A6W021_MARMS Rieske (2Fe-2S) domain protein Length = 120 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 3 LCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPH-HGTPLPGRRDAYFDGT 61 LCHI L E +GF AGQ +FV++ D+ WR++CPH + P+ R+DAY D Sbjct: 10 LCHIDDLKEGDTKGFLENEAGQDLLFVVKFNDEFYGWRNACPHVNNAPMAWRKDAYMDAK 69 Query: 62 GQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHVDAGD 110 QH+ C AHGALF+P TG+C GPC G L VP+ ++ G + + D Sbjct: 70 KQHVACHAHGALFEPDTGLCIQGPCLGKRLKKVPVYVNSMGMVSISLTD 118 >D5WI65.1 D5WI65_BURSC Rieske (2Fe-2S) iron-sulfur domain protein Length = 101 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 3/101 (2%) Query: 9 LPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHH-GTPLPGRRDAYFDGTGQHLVC 67 +PE GARGFD + G +F++RRGD +RA+R+SCPH G +P R+ AY DG +H+VC Sbjct: 1 MPETGARGFDLQGRGTDDMFIVRRGDLLRAYRNSCPHWPGASMPWRKHAYLDGKAEHIVC 60 Query: 68 AAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHVDA 108 HGA F G+C LGPCQG L AV LRI++ G +V A Sbjct: 61 HGHGARFRLENGLCVLGPCQGRLLEAVLLRIEE--GRYVSA 99 >Q0BVI0.1 Q0BVI0_GRABC Rieske (2Fe-2S) domain protein Length = 118 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 1/107 (0%) Query: 2 YLCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPHHGTPLPGRRDAYFDGT 61 +LCH+ L + GA+GF G +F +RRGD VR + ++CPH G PL D + Sbjct: 9 FLCHVQDLSDPGAKGFPPAPGGFFGLFAIRRGDNVRVYVNACPHIGVPLEWAPDRFLSSD 68 Query: 62 GQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHVDA 108 GQH+VC HGALFD L+G C GPC+GD LT VP+ I ++G ++V A Sbjct: 69 GQHIVCGTHGALFDLLSGACQAGPCKGDHLTMVPVTI-ENGAVYVAA 114 >A4YU96.1 A4YU96_BRASO Putative uncharacterized protein Length = 121 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 69/109 (63%), Gaps = 1/109 (0%) Query: 1 MYLCHITQLPENGARGFDTESAGQATIFVLRRGDQVRAWRDSCPH-HGTPLPGRRDAYFD 59 + LCH ++ E +RGFD GQ ++FV+R ++ AWR++CPH G P+ RRDAY + Sbjct: 13 VRLCHSDEIGEAQSRGFDPRDEGQDSLFVVRWQGELHAWRNACPHVQGAPMAWRRDAYLN 72 Query: 60 GTGQHLVCAAHGALFDPLTGVCTLGPCQGDTLTAVPLRIDDDGGLHVDA 108 G +VC AHGA F P +G+C GPC+G+ L + L +D DG L V + Sbjct: 73 AAGTRIVCHAHGAEFMPDSGLCVQGPCRGERLHQLELVVDADGELFVKS 121