BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0052.p (600 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J256.1 D8J256_HERSS C4-dicarboxylate transport sensor kinase t... 1217 0.0 F1VU66.1 F1VU66_9BURK Transporter 647 0.0 B9Z1X0.1 B9Z1X0_9NEIS Integral membrane sensor signal transducti... 396 e-108 B2JC55.1 B2JC55_BURP8 Integral membrane sensor signal transducti... 392 e-106 B5SAP4.1 B5SAP4_RALSO C4-dicarboxylate transport sensor kinase p... 391 e-106 A3S076.1 A3S076_RALSO Transporter 391 e-106 B5RYW5.1 B5RYW5_RALSO C4-dicarboxylate transport sensor kinase p... 389 e-105 B2SX00.1 B2SX00_BURPP Histidine kinase 386 e-105 D5NJ99.1 D5NJ99_9BURK Histidine kinase 385 e-104 D8MYF2.1 D8MYF2_RALSO Sensor histidine kinase, transcriptional r... 384 e-104 >D8J256.1 D8J256_HERSS C4-dicarboxylate transport sensor kinase transcription regulator protein EC=2.7.3.- Length = 600 Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust. Identities = 597/600 (99%), Positives = 600/600 (100%) Query: 1 MRARRNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEA 60 MRARRNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEA Sbjct: 1 MRARRNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEA 60 Query: 61 LPFALGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDD 120 LPFALGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDD Sbjct: 61 LPFALGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDD 120 Query: 121 EFSFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVM 180 EFSFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVM Sbjct: 121 EFSFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVM 180 Query: 181 VVKVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYA 240 VVKVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYA Sbjct: 181 VVKVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYA 240 Query: 241 DLPITPVSALPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVAL 300 DLPITPVSALPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLM+AL Sbjct: 241 DLPITPVSALPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMLAL 300 Query: 301 AISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTE 360 AISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTE Sbjct: 301 AISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTE 360 Query: 361 SLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENL 420 SLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENL Sbjct: 361 SLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENL 420 Query: 421 EYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIR 480 EYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIR Sbjct: 421 EYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIR 480 Query: 481 AAACVTGDVVRTEQVLINLLRNALDAVEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 AAACVTGDVVRTEQVL+NLLRNALDAVEEAEHKRIAVVLEVAGG+ALVRIRDSGGGIADE Sbjct: 481 AAACVTGDVVRTEQVLVNLLRNALDAVEEAEHKRIAVVLEVAGGYALVRIRDSGGGIADE 540 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKMET 600 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKMET Sbjct: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKMET 600 >F1VU66.1 F1VU66_9BURK Transporter Length = 604 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/589 (57%), Positives = 430/589 (73%), Gaps = 3/589 (0%) Query: 10 LTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQA 69 L L + A+LL+ G+TY LA R A D Q QLQI ALDL+S+L+K+E LPFAL Sbjct: 14 LWLAVAASLLLVGLTYWLAARMARSDIDRQSERQLQIIALDLQSMLEKFETLPFALSVHP 73 Query: 70 DVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDF 129 D+ L P D V R+N+ +T+Q+Q++ +I+++D +GLT+A+SNW+D +++GR+F Sbjct: 74 DLTAALLQPADAATVARVNQTLQTVQRQARVAAIYLMDPQGLTIAASNWNDAQNYIGRNF 133 Query: 130 GFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEF 189 GFRPYF +A+ G AGRFYGIG+ +SEPGYFIAQP+ +G P+GV+ VK+ L EF Sbjct: 134 GFRPYFRDAIDGGAGRFYGIGSTTSEPGYFIAQPVLA---NGQGGKPLGVLAVKISLNEF 190 Query: 190 EHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA 249 E TW++S +PI L D GVVFL NRP W+YHSL + + + T QY ITP+++ Sbjct: 191 ERTWQTSDEPIVLADKDGVVFLGNRPAWQYHSLAPVDAAASEKIKATLQYVGKTITPIAS 250 Query: 250 LPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISLLAWYQ 309 LP A + G+ V+RPVGRLGWQL LF +Q+R+ RTA+LW+ A AL+M++ +SL A +Q Sbjct: 251 LPAASRKGYDQSVARPVGRLGWQLRLFSAQSRITRTALLWSGAVALVMLSAMLSLWARHQ 310 Query: 310 HRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLRTTQNE 369 RRRLEER ASR AL++AA EL+ +I RTG+L AN+ L +Y +L+ E LLRTTQ+E Sbjct: 311 RRRRLEERQASRQALQQAAEELDLQITLRTGELLQANRDLGDKYARLEHAEQLLRTTQDE 370 Query: 370 LVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYISSASAT 429 LVQAGKLAMLGQMAAGVTHELNQPL AIRAFADNAV FL RGQ AQA NL +IS+ASA Sbjct: 371 LVQAGKLAMLGQMAAGVTHELNQPLAAIRAFADNAVTFLERGQPAQASANLAHISAASAR 430 Query: 430 MGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIRAAACVTGDV 489 MG II QLKGFARKS +VA V+L+ ++ AS+LLL +E +LG + +DI +TGD Sbjct: 431 MGVIIGQLKGFARKSHGSVALVELTPSVHASALLLQAEFDRLGVVLQLDIAGPLQITGDA 490 Query: 490 VRTEQVLINLLRNALDAVEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPF 549 VR EQVLINLLRNALDAVEEA + +A+ + G HAL+ +RDSG GI D+VA LF PF Sbjct: 491 VRLEQVLINLLRNALDAVEEAPQRHVALSVAREGDHALICVRDSGPGIPDDVAAQLFAPF 550 Query: 550 FTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKM 598 FTTK S KGLGLGLAISSSIVQAM GQLSAHN GGAEF +RLPL + Sbjct: 551 FTTKPSGKGLGLGLAISSSIVQAMRGQLSAHNLPGGGAEFQLRLPLFTV 599 >B9Z1X0.1 B9Z1X0_9NEIS Integral membrane sensor signal transduction histidine kinase Length = 624 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 241/585 (41%), Positives = 332/585 (56%), Gaps = 24/585 (4%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y L LR Q+ A +L AL L+++L ++EALP+ L + ++L P D Sbjct: 39 YTLLLRGQLAAQRQANAQRLGAYALSLDNLLARHEALPYVLSLDGRLARLLAQPSDAALT 98 Query: 85 DRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGRAG 144 +N + +QQ++ F+LDR G TLASSNW S VG + +RPYF A+ GR Sbjct: 99 AEVNHYLEGVQQRAGVAQAFLLDRSGRTLASSNWHSPLSLVGNSYAYRPYFQGAINGRPS 158 Query: 145 RFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITLTD 204 RFYGIG+ + EPG F+A P+ PIGV+VVKV L E W++S D + L D Sbjct: 159 RFYGIGSTTREPGVFLAAPLPSPTG------PIGVVVVKVKLDSIERAWQASGDHLALAD 212 Query: 205 AGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSALPPALQSGFGSHV-- 262 GV+FL+ W+YH+L L P ++ L QY D P+ P++A AL+ G G Sbjct: 213 RDGVLFLATESAWQYHTLAPLPPAVRHRLHAERQYGDYPLPPLAA-DTALR-GHGEQRRL 270 Query: 263 ------------SRPVGRLGWQLMLFPSQARM-QRTAMLWTMACALLMVALAISLLAWYQ 309 S P G LGW+++LF A Q A LA+++ W Q Sbjct: 271 PLGNARRELLVQSHPAGLLGWRVLLFSELAEARQNAAGGAAALGFATAFVLALTVY-WQQ 329 Query: 310 HRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLRTTQNE 369 RRRL ER A++ LRR A LE RI ERT L AAN L R ++L++TES+LR T++ Sbjct: 330 RRRRLAERRAAQAELRRVEAGLEARIVERTAALQAANTTLGQRVDELKRTESILRETRDS 389 Query: 370 LVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYISSASAT 429 VQAGKLA+LGQMAAGVTHELNQPL A+ +DNAVK + + +A +NL I + Sbjct: 390 AVQAGKLAVLGQMAAGVTHELNQPLAALNTLSDNAVKLIELARYDEARDNLTLIGQLTGR 449 Query: 430 MGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIRAAACVTGDV 489 +G+I+ QLK FAR++ A V ++QA+E + L++ ++L A I+ DI DV Sbjct: 450 LGRILGQLKSFARQAPADTAAVHVAQAVEHACLIVEPRRRELDAVIATDIAPELQAWADV 509 Query: 490 VRTEQVLINLLRNALDAVEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPF 549 VR EQVL+NLLRN LDA+ R+ + G + +RD G G+ E LFEPF Sbjct: 510 VRLEQVLVNLLRNGLDAMAGQAAPRLELHAVRHGTRLRLTVRDHGPGLPAEALERLFEPF 569 Query: 550 FTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLP 594 +TTK + +GLGLGLAIS +IV++ G L+A N + GA F + LP Sbjct: 570 YTTKPAGQGLGLGLAISLAIVESFGGTLTAGNADGAGAVFRLDLP 614 >B2JC55.1 B2JC55_BURP8 Integral membrane sensor signal transduction histidine kinase Length = 683 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 237/622 (38%), Positives = 347/622 (55%), Gaps = 44/622 (7%) Query: 5 RNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFA 64 R LLIL + + CG+T+ + + + A + L+S L++YE+LP+ Sbjct: 55 RRLLILFALVAGLVAACGLTWTITWQHGIDTLRRNAAVRADRTTATLKSTLERYESLPYL 114 Query: 65 LGFQADVRQVL--QHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEF 122 LG V+ VL PD+V R N+ + ++++A +++ G +A+SNWD Sbjct: 115 LGEHPLVQDVLVDPKPDNVA---RANQYLTDLNRRARANVAYLVTAAGRCVAASNWDQPD 171 Query: 123 SFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVV 182 SF+G+ + FRPYF EAV+G+ GRF+GIG S +PGY+I+QP+ R +G + +GV VV Sbjct: 172 SFIGQAYLFRPYFVEAVKGKVGRFFGIGTTSLDPGYYISQPVRR-----DGKI-VGVAVV 225 Query: 183 KVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADL 242 K++L F+ +++P+ +TD GV+FLS+ P WKYH+++ L+ + ++ T QYA Sbjct: 226 KLNLEWFQGA--DASEPMIVTDDHGVIFLSSVPAWKYHTVKPLTSDVIASIYDTRQYARQ 283 Query: 243 PITPVS-ALPPALQSG----------FGSHVS-------RPVGRLGWQLMLFPSQARMQR 284 PI P+ ++ L+ G G++ + R +G W+L+ + Sbjct: 284 PIAPLPMSVVRTLEGGAQIVRIGGGRTGNYAAPRFLASQRTLGEPDWRLITLAPVDPVNA 343 Query: 285 TAMLWTMACALLMVALAISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTA 344 A T+ V+L + L W R R+ E M SR L++A AEL QR+AERT L+ Sbjct: 344 DARYATIVTGFGYVSLCLLLFYWRMRRARVREVMRSRALLQKAYAELNQRVAERTADLSQ 403 Query: 345 ANQALEARYEKLQQTESLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNA 404 AN+ L + + E LR +EL+QA KLA LGQMAAG+THELNQPL A+R F+DN Sbjct: 404 ANEQLTKEVSERTRAEQELRDAHDELIQASKLAALGQMAAGITHELNQPLAALRGFSDNT 463 Query: 405 VKFLARGQSAQAVENLEYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLL 464 FL RG A ENLE I++ + MGKI QLK F ++ AC +++A+ LL Sbjct: 464 RVFLERGDQESAKENLEAIAALTERMGKITNQLKLFVGRARPRNACAGVARALRNVLTLL 523 Query: 465 ASECQKLGATISIDIRAAA-------------CVTGDVVRTEQVLINLLRNALDAVEEAE 511 Q + +S+ A+ V D +R EQVLINLL NALDAV Sbjct: 524 QKRLQGVTVDVSLSDEGASPVRFNLDIDDPKLVVHCDDLRLEQVLINLLGNALDAVAATP 583 Query: 512 HKRIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPFFTTKSSSKGLGLGLAISSSIVQ 571 RIA+ ++ + + + D+G GI DEV P LFEPFFTTK +GLGLGLAI SSI + Sbjct: 584 SPRIAIGVQTSPDVLTLTVSDNGPGIPDEVLPRLFEPFFTTKEMGQGLGLGLAICSSIAR 643 Query: 572 AMNGQLSAHNHEEGGAEFVVRL 593 G L+A N+ +GGAEFV+ L Sbjct: 644 DCGGSLAARNNAQGGAEFVLTL 665 >B5SAP4.1 B5SAP4_RALSO C4-dicarboxylate transport sensor kinase protein EC=2.7.3.- Length = 635 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 234/595 (39%), Positives = 338/595 (56%), Gaps = 32/595 (5%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y LAL+ + + + A +L L +YE+LP + + L P AV Sbjct: 39 YALALQHYVAARAEEAGRRTTFYAQNLRGTLARYESLPRLAALEHVLHVALTAPHHRDAV 98 Query: 85 DR--LNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGR 142 R N K +Q + +++++D G TLA+SNWD SF+GR++ FRPYF +A++ Sbjct: 99 LRGAANAYLKEVQIAADLTAVYLMDATGQTLAASNWDQPSSFIGRNYAFRPYFVDAMREG 158 Query: 143 AGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITL 202 GRFYG+GN + E GYF+A P+ EG+ PIG + VK++L FE T S D + L Sbjct: 159 LGRFYGVGNTTGETGYFLAAPVR------EGNQPIGAVAVKINLDSFEATLARSGDTVLL 212 Query: 203 TDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA-----------LP 251 D GV+FLS+ PEWKY +L L+ AL T QY + P+ P Sbjct: 213 VDRHGVIFLSSVPEWKYRTLGTLNAAQHVALDATRQYVPHTLAPLDVRAGGVPFSADRAP 272 Query: 252 PALQSGF-GSHVS------RPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISL 304 L+ G VS RP+G LGWQ+ + QRTA++ + A M L Sbjct: 273 QTLRVALPGRSVSTLRVQYRPIGLLGWQVAVLIDPRAEQRTALVAGASAAFAMALAFAVL 332 Query: 305 LAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLR 364 +A RR EE+ ++R ALR +LE RIA+RT +LT+AN AL ++ E L T+ +LR Sbjct: 333 VALGLRARRHEEQRSARAALREVQRDLEARIAQRTVELTSANAALASKVEALDATQRILR 392 Query: 365 TTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYIS 424 T++ VQAGKLA+LGQMAAG+THELNQPLTA+ +DNA + RG+ + NL +I Sbjct: 393 ETRDAAVQAGKLAVLGQMAAGITHELNQPLTALTTLSDNANQLAERGRIDEVRGNLAHIG 452 Query: 425 SASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISID-IRAAA 483 + MG+I++ +KGFARK A A V + +AI + +L+ + ++ G +++ + Sbjct: 453 QLAHRMGRIVSHIKGFARKGDAARAAVPVEEAIRQALMLVDTRRRQAGVPVTVGLVPPGV 512 Query: 484 CVTGDVVRTEQVLINLLRNALDA---VEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 V + VR EQVL+NL+RNA+DA V + E + V ++V + +RD+G GIA + Sbjct: 513 AVWANAVRLEQVLVNLIRNAIDATAEVPQPEAAGVRVTVDVGDALVCITVRDAGPGIAPQ 572 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEE--GGAEFVVRL 593 V HLFEPFFTTK+ +GLGLGLAIS +IV+ G+L N ++ GGA FV+ L Sbjct: 573 VLSHLFEPFFTTKADGQGLGLGLAISLAIVEDFGGRLEGRNADDGAGGAAFVIEL 627 >A3S076.1 A3S076_RALSO Transporter Length = 635 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 234/595 (39%), Positives = 338/595 (56%), Gaps = 32/595 (5%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y LAL+ + + + A +L L +YE+LP + + L P AV Sbjct: 39 YALALQHYVAARAEEAGRRTTFYAQNLRGTLARYESLPRLAALEHVLHVALTAPHHRDAV 98 Query: 85 DR--LNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGR 142 R N K +Q + +++++D G TLA+SNWD SF+GR++ FRPYF +A++ Sbjct: 99 LRGAANAYLKEVQIAADLTAVYLMDATGQTLAASNWDQPSSFIGRNYAFRPYFVDAMREG 158 Query: 143 AGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITL 202 GRFYG+GN + E GYF+A P+ EG+ PIG + VK++L FE T S D + L Sbjct: 159 LGRFYGVGNTTGETGYFLAAPVR------EGNQPIGAVAVKINLDSFEATLARSGDTVLL 212 Query: 203 TDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA-----------LP 251 D GV+FLS+ PEWKY +L L+ AL T QY + P+ P Sbjct: 213 VDRHGVIFLSSVPEWKYRTLGTLNAAQHVALDATRQYVPHTLAPLDVRAGGVPFSADRAP 272 Query: 252 PALQSGF-GSHVS------RPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISL 304 L+ G VS RP+G LGWQ+ + QRTA++ + A M L Sbjct: 273 QTLRVALPGRSVSTLRVQYRPIGLLGWQVAVLIDPRAEQRTALVAGASAAFAMALAFAVL 332 Query: 305 LAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLR 364 +A RR EE+ ++R ALR +LE RIA+RT +LT+AN AL ++ E L T+ +LR Sbjct: 333 VALGLRARRHEEQRSARAALREVQRDLEARIAQRTVELTSANAALASKVEALDATQRILR 392 Query: 365 TTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYIS 424 T++ VQAGKLA+LGQMAAG+THELNQPLTA+ +DNA + RG+ + NL +I Sbjct: 393 ETRDAAVQAGKLAVLGQMAAGITHELNQPLTALTTLSDNANQLAERGRIDEVRGNLAHIG 452 Query: 425 SASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISID-IRAAA 483 + MG+I++ +KGFARK A A V + +AI + +L+ + ++ G +++ + Sbjct: 453 QLAHRMGRIVSHIKGFARKGDAARAAVPVEEAIRQALMLVDTRRRQAGVPVTVGLVPPGV 512 Query: 484 CVTGDVVRTEQVLINLLRNALDA---VEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 V + VR EQVL+NL+RNA+DA V + E + V ++V + +RD+G GIA + Sbjct: 513 AVWANAVRLEQVLVNLIRNAIDATAEVPQPEAAGVRVTVDVGDALVCITVRDAGPGIAPQ 572 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEE--GGAEFVVRL 593 V HLFEPFFTTK+ +GLGLGLAIS +IV+ G+L N ++ GGA FV+ L Sbjct: 573 VLSHLFEPFFTTKADGQGLGLGLAISLAIVEDFGGRLEGRNADDGAGGAAFVIEL 627 >B5RYW5.1 B5RYW5_RALSO C4-dicarboxylate transport sensor kinase protein EC=2.7.3.- Length = 635 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 234/595 (39%), Positives = 338/595 (56%), Gaps = 32/595 (5%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y LAL+ + + + A +L L +YE+LP + + L P AV Sbjct: 39 YALALQHYVAARAEEAGRRTTFYAQNLRGTLARYESLPRLAALEHVLHVALTAPYHRDAV 98 Query: 85 DR--LNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGR 142 R N K +Q + +++++D G TLA+SNWD SF+GR++ FRPYF +A++ Sbjct: 99 LRGAANAYLKEVQIAADLTAVYLMDATGQTLAASNWDQPSSFIGRNYAFRPYFVDAMREG 158 Query: 143 AGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITL 202 GRFYG+GN + E GYF+A P+ EG+ PIG + VK++L FE T S D + L Sbjct: 159 LGRFYGVGNTTGETGYFLAAPVR------EGNQPIGAVAVKINLDSFEATLARSGDTVLL 212 Query: 203 TDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA-----------LP 251 D GV+FLS+ PEWKY +L L+ AL T QY + P+ P Sbjct: 213 VDRHGVIFLSSVPEWKYRTLGTLNAAQHVALDATRQYVPHTLAPLDVRAGGVPFSADHAP 272 Query: 252 PALQSGF-GSHVS------RPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISL 304 L+ G VS RP+G LGWQ+ + QRTA++ + A M L Sbjct: 273 QTLRVALPGRSVSTLRVQYRPIGLLGWQVAVLIDPRAEQRTALVAGASAAFAMALAFAVL 332 Query: 305 LAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLR 364 +A RR EE+ ++R ALR +LE RIA+RT +LT+AN AL ++ E L T+ +LR Sbjct: 333 VALGLRARRHEEQRSARAALREVQRDLEARIAQRTVELTSANVALASKVEALDATQRILR 392 Query: 365 TTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYIS 424 T++ VQAGKLA+LGQMAAG+THELNQPLTA+ +DNA + RG+ + NL +I Sbjct: 393 ETRDAAVQAGKLAVLGQMAAGITHELNQPLTALTTLSDNANQLAERGRIDEVRGNLAHIG 452 Query: 425 SASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISID-IRAAA 483 + MG+I++ +KGFARK A A V + +AI + +L+ + ++ G +++ + Sbjct: 453 QLAHRMGRIVSHIKGFARKGDAARAAVPVEEAIRQALMLVDTRRRQAGVPVTVGLVPPGV 512 Query: 484 CVTGDVVRTEQVLINLLRNALDA---VEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 V + VR EQVL+NL+RNA+DA V + E + V ++V + +RD+G GIA + Sbjct: 513 AVWANAVRLEQVLVNLIRNAIDATAEVPQPEAAGVRVTVDVGDALVCITVRDAGPGIAPQ 572 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEE--GGAEFVVRL 593 V HLFEPFFTTK+ +GLGLGLAIS +IV+ G+L N ++ GGA FV+ L Sbjct: 573 VLQHLFEPFFTTKADGQGLGLGLAISLAIVEDFGGRLEGRNADDGAGGAAFVIEL 627 >B2SX00.1 B2SX00_BURPP Histidine kinase Length = 666 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 239/627 (38%), Positives = 339/627 (54%), Gaps = 43/627 (6%) Query: 5 RNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFA 64 R LLIL + ++ CG+TY LA + + A ++ L+S L++YE+LP+ Sbjct: 41 RRLLILFALVAGLVVACGLTYSLAWQSGIDHLRRNAAVRVDRTTSALKSTLERYESLPYL 100 Query: 65 LGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSF 124 L V+ L P V R N + + ++A +++ G +A+SNW SF Sbjct: 101 LAEHPIVQDALVDPTPA-NVQRANLYLDDLNRHARATVTYIIPLDGFCVAASNWRGPGSF 159 Query: 125 VGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKV 184 +G + FRPYF +AV+G GRF+GIG IS PGY+I+QP+ R EG + +GV VVK+ Sbjct: 160 IGAGYLFRPYFVDAVKGGVGRFFGIGTISQAPGYYISQPVRR-----EGKI-VGVAVVKL 213 Query: 185 DLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPI 244 DL F+ +++P+ +TD GV+FLS+ P WKYH+++ LS P+ ++ QYA PI Sbjct: 214 DLEWFQGV--DASEPLVVTDDHGVIFLSSVPAWKYHTIRPLSGPVADSIYQARQYAQQPI 271 Query: 245 TPVSALPPALQS-----------GFGSHVSR------PVGRLGWQLMLFPSQARMQRTAM 287 P LP +++ G G + R +G W L+ + A Sbjct: 272 AP---LPVSIERTLEGNAQIVRIGGGRYAPRYLASRRGMGEPDWHLITMSPVDPVDADAR 328 Query: 288 LWTMACALLMVALAISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQ 347 T+ A V+L + W R R+ E M SR L++A AEL +R+AERT L+ AN+ Sbjct: 329 KATIVTAFGYVSLVLLAFYWRMRRARVREVMRSRALLQKAYAELNRRVAERTADLSQANE 388 Query: 348 ALEARYEKLQQTESLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKF 407 L+ + + E LR +EL+QA KLA LGQMAAG+THELNQPL A+R F+DN Sbjct: 389 QLQKEVAERTRAEQELRAAHDELIQASKLAALGQMAAGITHELNQPLAALRGFSDNTRVL 448 Query: 408 LARGQSAQAVENLEYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASE 467 L RG A A ENLE I++ + MGKI QLK F ++ A + +A+ LL Sbjct: 449 LERGDQASARENLEAIAALTERMGKITNQLKLFVGRARPRNARAPIVRALRNVVALLQKR 508 Query: 468 CQKLGATISI--------------DIRAAACVTGDVVRTEQVLINLLRNALDAVEEAEHK 513 Q + I++ D D +R EQVLINLL NALDA + Sbjct: 509 LQGVEVDITLLDADSGTRTPLSLADDHPELVAHCDDLRLEQVLINLLGNALDATADLHPP 568 Query: 514 RIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAM 573 RI++ +EVA + + D+G GIAD+V P LFEPFFTTK +GLGLGLAISSSI + Sbjct: 569 RISIEIEVADANLSFVVSDNGPGIADDVLPRLFEPFFTTKEMGQGLGLGLAISSSIARDC 628 Query: 574 NGQLSAHNHEEGGAEFVVRLPLLKMET 600 G L A N +GGA FV+ L +++T Sbjct: 629 GGSLVARNAPDGGALFVLTLRRARVQT 655 >D5NJ99.1 D5NJ99_9BURK Histidine kinase Length = 666 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 238/627 (37%), Positives = 339/627 (54%), Gaps = 43/627 (6%) Query: 5 RNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFA 64 R LLIL + + CG+TY +A + + A ++ L+S L++YE+LP+ Sbjct: 41 RRLLILFALVAGLVAACGLTYSIAWQSGIDHLRRNAAVRVDRTTSALKSTLERYESLPYL 100 Query: 65 LGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSF 124 L V+ VL +P V R N + + + ++A +++ G +A+SNW SF Sbjct: 101 LAEHPIVQDVLVNPS-AANVARANLYLEDLNRHARATVTYIIPLDGFCVAASNWRGPGSF 159 Query: 125 VGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKV 184 +G + FRPYF +AV+G GRF+GIG IS PGY+I+QP+ RR D+ +GV VVK+ Sbjct: 160 IGAGYQFRPYFLDAVRGGVGRFFGIGTISQAPGYYISQPV-RRDDKI-----VGVAVVKL 213 Query: 185 DLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPI 244 DL F+ +++P+ +TD GV+FLS+ P WKYH+++ LS P+ ++ QYA PI Sbjct: 214 DLEWFQAA--DASEPLVVTDDHGVIFLSSMPAWKYHTIRPLSGPVADSIYQARQYAQQPI 271 Query: 245 TPVSALPPALQS-----------GFGSHVSR------PVGRLGWQLMLFPSQARMQRTAM 287 P LP +++ G G + R +G W L+ + A Sbjct: 272 AP---LPVSIERTLEGNAQIVRIGGGRYAPRYLASRRGMGEPDWHLITMSPVDPVDADAR 328 Query: 288 LWTMACALLMVALAISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQ 347 T+ V+LA+ W R R+ E M SR L++A AEL +R+AERT L+ AN+ Sbjct: 329 KATIVTGFGYVSLALLAFYWRMRRARVREVMRSRALLQKAYAELNRRVAERTADLSQANE 388 Query: 348 ALEARYEKLQQTESLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKF 407 L+ + + E LR +EL+QA KLA LGQMAAG+THELNQPL A+R F+DN Sbjct: 389 QLQKEVAERTRAEQELRAAHDELIQASKLAALGQMAAGITHELNQPLAALRGFSDNTRVL 448 Query: 408 LARGQSAQAVENLEYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASE 467 L RG A ENLE I++ + MGKI QLK F ++ A + +A+ LL Sbjct: 449 LERGDQVSARENLEAIAALTERMGKITNQLKLFVGRARPRSARAPIVRALRNVVALLQKR 508 Query: 468 CQKLGATISI--------------DIRAAACVTGDVVRTEQVLINLLRNALDAVEEAEHK 513 Q + ++ D D +R EQVLINLL NALDA + + Sbjct: 509 LQGVEIEFALLDAQSGSRMPLSLADDYPELIAHCDDLRLEQVLINLLGNALDATADIDSP 568 Query: 514 RIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAM 573 RI++ +EVA + + D+G GIAD+V P LFEPFFTTK +GLGLGLAISSSI + Sbjct: 569 RISIEIEVADANLSFVVSDNGPGIADDVLPRLFEPFFTTKEMGQGLGLGLAISSSIARDC 628 Query: 574 NGQLSAHNHEEGGAEFVVRLPLLKMET 600 G L A N GGA FV+ L +M+T Sbjct: 629 GGSLVARNAPGGGALFVLTLRRARMQT 655 >D8MYF2.1 D8MYF2_RALSO Sensor histidine kinase, transcriptional regulator of C4-dicarboxylate transport EC=2.7.13.3 Length = 635 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 240/595 (40%), Positives = 334/595 (56%), Gaps = 32/595 (5%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y LAL++ + + + A +L L +YE+LP + + L P AV Sbjct: 39 YALALQRYVAARAEEAGQRTTFYAQNLRGTLARYESLPRLAALEHVLHVALTAPHHRDAV 98 Query: 85 DR--LNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGR 142 R N K +Q + +++++D G TLA+SNWD SF+GR++ FRPYF +A++ Sbjct: 99 LRRAANAYLKEVQVAADLTAVYLMDAAGQTLAASNWDQPSSFIGRNYAFRPYFVDAMREG 158 Query: 143 AGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITL 202 GRFYG+GN + E GYF+A P+ EGD +G + VK++L FE T S D + L Sbjct: 159 LGRFYGVGNTTGETGYFLAAPVR------EGDQSVGAVAVKINLDSFEATLARSGDTVLL 212 Query: 203 TDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA-----------LP 251 D GV+FLS+ PEWKY +L LS + AL T QY + P+ +P Sbjct: 213 VDRHGVIFLSSVPEWKYRTLGTLSAAQRAALDATRQYVPHALAPLDPRAGGVPFSADQVP 272 Query: 252 PALQSGF-GSHVS------RPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISL 304 L+ G VS RPVG LGWQ+ + QRTA++ + A M Sbjct: 273 QTLRVALPGRSVSTLRVQYRPVGLLGWQVAVLIDPRDEQRTALVAGASAAFAMALAFAVF 332 Query: 305 LAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLR 364 +A RR EE+ ++R ALR +LE RIA+RT +LT+AN AL ++ E L T+ +LR Sbjct: 333 VALRLRARRHEEQRSARAALREVQRDLEARIAQRTAELTSANAALASKVEALDATQRILR 392 Query: 365 TTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYIS 424 T++ VQAGKLA+LGQMAAG+THELNQPLTA+ +DNA + RG+ + NL +IS Sbjct: 393 ETRDAAVQAGKLAVLGQMAAGITHELNQPLTALTTLSDNANQLAERGRIDEVRGNLAHIS 452 Query: 425 SASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLAS-ECQKLGATISIDIRAAA 483 + MG+I++ +KGFARK A V + +AI + +L+ + Q + Sbjct: 453 QLAHRMGRIVSHIKGFARKGDALRAAVPVEEAIRQALMLVDTRRRQAGVPVAVGPVPPGV 512 Query: 484 CVTGDVVRTEQVLINLLRNALDAVEEAEHKRIAVV-LEVAGGHALVRI--RDSGGGIADE 540 V + VR EQVL+NL+RNA+DA EA A V + V ALVRI RD+G GIA Sbjct: 513 AVWANAVRLEQVLVNLIRNAIDATAEAPQPEAASVRVTVDADDALVRITVRDAGPGIAPG 572 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEE--GGAEFVVRL 593 V HLFEPFFTTK+ +GLGLGLAIS +IV+ G+L N ++ GGA FV+ L Sbjct: 573 VLSHLFEPFFTTKADGQGLGLGLAISLAIVEDFGGRLEGRNADDGAGGAAFVIEL 627