BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0045.p (160 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J262.1 D8J262_HERSS Competence-and mitomycin-induced protein 323 5e-87 A4G2V1.1 A4G2V1_HERAR Putative Competence-damaged protein CinA 209 1e-52 F1VUL2.1 F1VUL2_9BURK C-terminal domain of competence/damage-ind... 207 5e-52 A6SVK0.1 A6SVK0_JANMA Competence/damage inducible protein CinA C... 187 5e-46 F2L936.1 F2L936_BURGA CinA domain protein 183 7e-45 F0GCW3.1 F0GCW3_9BURK Competence/damage-inducible protein 182 1e-44 C5AAX9.1 C5AAX9_BURGB CinA domain protein 182 1e-44 A2WCR9.1 A2WCR9_9BURK Putative uncharacterized protein 182 2e-44 A4JBG1.1 A4JBG1_BURVG CinA domain protein 182 2e-44 B9CJJ4.1 B9CJJ4_9BURK CinA domain protein 182 2e-44 >D8J262.1 D8J262_HERSS Competence-and mitomycin-induced protein Length = 160 Score = 323 bits (828), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 160/160 (100%), Positives = 160/160 (100%) Query: 1 MDSTLDLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKN 60 MDSTLDLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKN Sbjct: 1 MDSTLDLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKN 60 Query: 61 ELLDISEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCF 120 ELLDISEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCF Sbjct: 61 ELLDISEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCF 120 Query: 121 GWRVGDKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLLAD 160 GWRVGDKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLLAD Sbjct: 121 GWRVGDKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLLAD 160 >A4G2V1.1 A4G2V1_HERAR Putative Competence-damaged protein CinA Length = 162 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 100/158 (63%), Positives = 123/158 (77%) Query: 1 MDSTLDLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKN 60 M + L+LA R G+ L+ +GLLLAT ESCTGGG+A AITEIAGSS WF+CGFVTYSNASK Sbjct: 1 MQNILELAERAGRRLQERGLLLATTESCTGGGVAQAITEIAGSSGWFECGFVTYSNASKM 60 Query: 61 ELLDISEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCF 120 LL + E+L+AQ+GAVS+E A AM GA+ANS + VA+STTGIAGP G VPGKPVG VCF Sbjct: 61 NLLKVPESLLAQYGAVSKETAAAMCRGALANSRATVALSTTGIAGPDGGVPGKPVGLVCF 120 Query: 121 GWRVGDKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLL 158 GW G + + ++ +F GDR VR Q+V H+L+GLL L Sbjct: 121 GWAHGAQVHVDQKIFSGDRHAVREQSVAHALQGLLDFL 158 >F1VUL2.1 F1VUL2_9BURK C-terminal domain of competence/damage-inducible protein CinA-like protein Length = 161 Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 115/158 (72%), Positives = 133/158 (84%) Query: 1 MDSTLDLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKN 60 MD DLA + GQ L+ +GLLL TAESCTGGG+AHAIT+IAG SEWFDCGF+TYSNASK Sbjct: 1 MDKITDLAAQAGQALQQRGLLLTTAESCTGGGVAHAITDIAGCSEWFDCGFITYSNASKI 60 Query: 61 ELLDISEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCF 120 ELLD+ +ALIAQHGAVSEEIA AMAEGA+A+S++ VA+STTGIAGPGGAV GKPVGTVCF Sbjct: 61 ELLDVPDALIAQHGAVSEEIAAAMAEGALASSNAHVALSTTGIAGPGGAVAGKPVGTVCF 120 Query: 121 GWRVGDKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLL 158 GW + T TER VF GDR VR QTV ++L+GLL+LL Sbjct: 121 GWSMNATTVTERRVFDGDRHSVREQTVAYALQGLLRLL 158 >A6SVK0.1 A6SVK0_JANMA Competence/damage inducible protein CinA C-terminal domain Length = 167 Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 101/159 (63%), Positives = 128/159 (80%) Query: 1 MDSTLDLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKN 60 M + ++LA VG+TL+ +GL+LATAESCTGGG+A AITEIAGSSEWF+CGFVTYSN +K Sbjct: 1 MANLIELAELVGRTLQQRGLMLATAESCTGGGVAQAITEIAGSSEWFECGFVTYSNEAKM 60 Query: 61 ELLDISEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCF 120 +L + E +A+HGAVS E A AMA+GA+ANS + VA+STTGIAGPGG VPGKPVG VCF Sbjct: 61 AMLKVPEETLARHGAVSYETAQAMAQGALANSRAKVALSTTGIAGPGGGVPGKPVGMVCF 120 Query: 121 GWRVGDKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLLA 159 GW +G++ + ++F GDR VR Q+VEH+L+GLL LA Sbjct: 121 GWALGEQVQVDHVIFSGDRHAVREQSVEHALQGLLNFLA 159 >F2L936.1 F2L936_BURGA CinA domain protein Length = 166 Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 92/153 (60%), Positives = 113/153 (73%) Query: 6 DLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKNELLDI 65 LA R G L+ + L+LATAESCTGG IA AIT+I+GSS WF+ GFVTYSN +K+E++ + Sbjct: 9 QLAIRAGNKLRDEHLMLATAESCTGGMIATAITDISGSSGWFERGFVTYSNQAKSEMIGV 68 Query: 66 SEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCFGWRVG 125 LI +HGAVSE +A AMAEGA+ NS + VA+S TGIAGPGG KPVGTV FGW Sbjct: 69 PPELIERHGAVSEPVARAMAEGALRNSRAQVALSVTGIAGPGGGSELKPVGTVSFGWSNR 128 Query: 126 DKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLL 158 T E LVF+GDR+Q+R Q H+L+GLLKLL Sbjct: 129 LHTEVETLVFRGDREQIRVQAATHALRGLLKLL 161 >F0GCW3.1 F0GCW3_9BURK Competence/damage-inducible protein Length = 166 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 91/152 (59%), Positives = 112/152 (73%) Query: 7 LATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKNELLDIS 66 LA R G L+ + L+LATAESCTGG IA AIT+I+GSS+WF+ GFVTYSN +K+E++ + Sbjct: 10 LAIRAGNKLRDEHLMLATAESCTGGMIAAAITDISGSSQWFERGFVTYSNQAKSEMIGVP 69 Query: 67 EALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCFGWRVGD 126 LI +HGAVSE +A AMAEGA+ NS + VA+S TGIAGP G KPVGTV F W Sbjct: 70 PDLIEKHGAVSEPVARAMAEGALRNSRAQVALSVTGIAGPAGGSEKKPVGTVSFAWSNRL 129 Query: 127 KTYTERLVFKGDRQQVRAQTVEHSLKGLLKLL 158 T E LVFKGDR+Q+R Q H+L+GLLKLL Sbjct: 130 HTDVETLVFKGDREQIRTQAAAHALRGLLKLL 161 >C5AAX9.1 C5AAX9_BURGB CinA domain protein Length = 166 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/153 (60%), Positives = 110/153 (71%) Query: 6 DLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKNELLDI 65 LA R G L+ + L LATAESCTGG IA AIT+I+GSS WF+ GFVTYSN +K E++ + Sbjct: 9 QLAIRAGNKLRDEHLALATAESCTGGMIAAAITDISGSSAWFERGFVTYSNQAKTEMIGV 68 Query: 66 SEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCFGWRVG 125 LI +HGAVSE +A AM EGA+ NS + VA+S TGIAGPGG KPVGTV FGW Sbjct: 69 PHELIEKHGAVSEPVARAMVEGALRNSRAQVALSVTGIAGPGGGSEHKPVGTVSFGWSNR 128 Query: 126 DKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLL 158 T E LVFKGDR+Q+R Q H+L+GLLKLL Sbjct: 129 LHTEVETLVFKGDREQIRTQAAAHALRGLLKLL 161 >A2WCR9.1 A2WCR9_9BURK Putative uncharacterized protein Length = 166 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 91/152 (59%), Positives = 112/152 (73%) Query: 7 LATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKNELLDIS 66 LA R G L+ + L+LATAESCTGG IA AIT+I+GSS+WF+ GFVTYSN +K+E++ + Sbjct: 10 LAIRAGNKLRDEHLMLATAESCTGGMIAAAITDISGSSQWFERGFVTYSNQAKSEMIGVP 69 Query: 67 EALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCFGWRVGD 126 LI +HGAVSE + AMAEGA+ NS + VA+S TGIAGPGG KPVGTV F W Sbjct: 70 PDLIEKHGAVSEPVVRAMAEGALRNSRAQVALSVTGIAGPGGGSEHKPVGTVSFAWSNRL 129 Query: 127 KTYTERLVFKGDRQQVRAQTVEHSLKGLLKLL 158 T E LVFKGDR+Q+R Q H+L+GLLKLL Sbjct: 130 HTDAETLVFKGDREQIRTQAAAHALRGLLKLL 161 >A4JBG1.1 A4JBG1_BURVG CinA domain protein Length = 166 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 92/152 (60%), Positives = 112/152 (73%) Query: 7 LATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKNELLDIS 66 LA R G L+ + L LATAESCTGG IA AIT+I+GSS+WF+ GFVTYSN +K+E++ + Sbjct: 10 LAIRAGNKLRDEHLSLATAESCTGGMIAAAITDISGSSQWFERGFVTYSNQAKSEMIGVP 69 Query: 67 EALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCFGWRVGD 126 LI +HGAVSE +A AMAEGA+ NS + VA+S TGIAGPGG KPVGTV F W Sbjct: 70 PDLIEKHGAVSEPVARAMAEGALRNSRAQVALSVTGIAGPGGGSEKKPVGTVSFAWSNRL 129 Query: 127 KTYTERLVFKGDRQQVRAQTVEHSLKGLLKLL 158 T E LVFKGDR+Q+R Q H+L+GLLKLL Sbjct: 130 HTDVETLVFKGDREQIRTQAAAHALRGLLKLL 161 >B9CJJ4.1 B9CJJ4_9BURK CinA domain protein Length = 166 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 93/158 (58%), Positives = 115/158 (72%), Gaps = 1/158 (0%) Query: 2 DSTL-DLATRVGQTLKAKGLLLATAESCTGGGIAHAITEIAGSSEWFDCGFVTYSNASKN 60 DS + LA R G L+ + L+LATAESCTGG IA AIT+I+GSS+WF+ GFVTYSN +K+ Sbjct: 4 DSVIHQLAIRAGNKLRDEHLMLATAESCTGGLIAAAITDISGSSQWFERGFVTYSNQAKS 63 Query: 61 ELLDISEALIAQHGAVSEEIAGAMAEGAVANSSSDVAVSTTGIAGPGGAVPGKPVGTVCF 120 E++ + LI +HGAVSE +A AMAEGA+ NS + VA+S TGIAGP G KPVGTV F Sbjct: 64 EMIGVPPDLIEKHGAVSEPVARAMAEGALRNSRAQVALSVTGIAGPAGGSEKKPVGTVSF 123 Query: 121 GWRVGDKTYTERLVFKGDRQQVRAQTVEHSLKGLLKLL 158 W T E LVFKGDR+Q+R Q H+L+GLLKLL Sbjct: 124 AWSNRLHTDVETLVFKGDREQIRTQAAAHALRGLLKLL 161