BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0019.p (217 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J281.1 D8J281_HERSS Two component response regulator protein 437 e-121 F1VZ63.1 F1VZ63_9BURK Response regulator transcription regulator... 303 8e-81 A2SKN3.1 A2SKN3_METPP Two component transcriptional regulator, w... 213 1e-53 D7DMC6.1 D7DMC6_METS0 Two component transcriptional regulator, w... 209 2e-52 A1K437.1 A1K437_AZOSB Probable two-component response regulatory... 209 3e-52 C4ZNL7.1 C4ZNL7_THASP Two component transcriptional regulator, w... 207 9e-52 Q5P7G4.1 Q5P7G4_AROAE Two-component response regulatory protein 206 2e-51 A3N689.1 A3N689_BURP6 DNA-binding response regulator 204 6e-51 Q63WW6.1 Q63WW6_BURPS Response regulator transcription regulator... 203 1e-50 A3NRX3.1 A3NRX3_BURP0 DNA-binding response regulator 203 1e-50 >D8J281.1 D8J281_HERSS Two component response regulator protein Length = 220 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 217/217 (100%), Positives = 217/217 (100%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNGNDALSQRFNAAVLVLDIGLPGIDGFEVLRR 60 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNGNDALSQRFNAAVLVLDIGLPGIDGFEVLRR Sbjct: 4 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNGNDALSQRFNAAVLVLDIGLPGIDGFEVLRR 63 Query: 61 MRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSAPQPAQ 120 MRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSAPQPAQ Sbjct: 64 MRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSAPQPAQ 123 Query: 121 LTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWGEDFT 180 LTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWGEDFT Sbjct: 124 LTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWGEDFT 183 Query: 181 INAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKSEA 217 INAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKSEA Sbjct: 184 INAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKSEA 220 >F1VZ63.1 F1VZ63_9BURK Response regulator transcription regulatory protein Length = 222 Score = 303 bits (777), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 151/215 (70%), Positives = 173/215 (80%), Gaps = 2/215 (0%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNGN--DALSQRFNAAVLVLDIGLPGIDGFEVL 58 LL EDD VL DG++R L SHG V V+NG+ + + AVLVLDIGLPGIDGFEV+ Sbjct: 4 LLAEDDSVLADGIARALRSHGMVVDVVDNGSAVELAIKHAEIAVLVLDIGLPGIDGFEVV 63 Query: 59 RRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSAPQP 118 RR+R G PVLLLTARD I DRVHG ELGADDYLVKPF+T ELVAR+KAL+RRSAP+P Sbjct: 64 RRLRLHGMQVPVLLLTARDAIQDRVHGFELGADDYLVKPFSTLELVARLKALVRRSAPKP 123 Query: 119 AQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWGED 178 +L++GGL+LD +RA I R IE S+REW VLEYLMQ ASRVVSKQQIIDA+LPWGED Sbjct: 124 IELSIGGLTLDTFARRAHIGTRSIEFSVREWAVLEYLMQQASRVVSKQQIIDAILPWGED 183 Query: 179 FTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLE 213 T+NAVEVYVSRIRLKIA S + IRTIRGFGY+LE Sbjct: 184 LTLNAVEVYVSRIRLKIAPSNIVIRTIRGFGYLLE 218 >A2SKN3.1 A2SKN3_METPP Two component transcriptional regulator, winged helix family Length = 266 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 115/217 (52%), Positives = 148/217 (68%), Gaps = 3/217 (1%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTV-HTVNNGNDALSQRFNAA-VLVLDIGLPGIDGFEVL 58 LL EDDP L + +R L S G+ V HT S + + +L+LDIGL GIDGFE L Sbjct: 41 LLAEDDPALAESTARALRSQGWVVDHTPRGEPVPTSVKTDPYDLLILDIGLIGIDGFETL 100 Query: 59 RRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRR-SAPQ 117 RR+R G+ PVL+LTARD I DRVHGLE+GADDYLVKPFA EL+AR+K L RR A Q Sbjct: 101 RRVREQGSTLPVLMLTARDAIEDRVHGLEMGADDYLVKPFALAELIARVKVLTRRHQARQ 160 Query: 118 PAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWGE 177 + L++GGL +D RA I + ++LS REW VLEYL+ VV K+QI+ A+ W + Sbjct: 161 GSVLSMGGLRMDLEANRAWIGEQPLDLSAREWAVLEYLLSRVGHVVGKEQILQAISGWDD 220 Query: 178 DFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEK 214 + NAVEVYVSR+R KI +G+ IR +RGFGY++E+ Sbjct: 221 ALSENAVEVYVSRLRPKIEPAGLRIRAVRGFGYLVEE 257 >D7DMC6.1 D7DMC6_METS0 Two component transcriptional regulator, winged helix family Length = 227 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 107/218 (49%), Positives = 152/218 (69%), Gaps = 3/218 (1%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNGNDALSQ--RFNAAVLVLDIGLPGIDGFEVL 58 LLVEDD L + +R L S + V V NG+ ++ + ++LD+GLPG+DGFE+L Sbjct: 4 LLVEDDTHLGESTARALRSQQWFVDWVRNGDSVINMIGLVSYDAIILDVGLPGMDGFEIL 63 Query: 59 RRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRR-SAPQ 117 +R+ N+ PVL+LTARDTI DRV+G +LGADDYLVKPFA ELVARI+A+ RR Q Sbjct: 64 HSLRSQNNSLPVLMLTARDTIDDRVYGFQLGADDYLVKPFALKELVARIQAITRRFHTRQ 123 Query: 118 PAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWGE 177 ++ G L +D KRA + + +EL REW VL Y++ + +VVSK+QI++A+ W E Sbjct: 124 HNEIIFGILRIDLTAKRAYLSDKSLELLPREWAVLVYILNNLGKVVSKEQILEAISDWDE 183 Query: 178 DFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKS 215 + NA+EVY+SR+R K+ +G++IRTIRGFGY++E+S Sbjct: 184 APSSNAIEVYISRLRTKLTPAGISIRTIRGFGYLIEES 221 >A1K437.1 A1K437_AZOSB Probable two-component response regulatory protein Length = 228 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 111/221 (50%), Positives = 146/221 (66%), Gaps = 6/221 (2%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNGNDA----LSQRFNAAVLVLDIGLPGIDGFE 56 LL EDDPV+ DG+ R L G+ V V NG +A SQ F+ +L+LD+GLP + G E Sbjct: 4 LLAEDDPVIADGIVRALKRGGYAVDHVGNGAEADTAVASQPFD--LLILDLGLPRLPGIE 61 Query: 57 VLRRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSAP 116 VL+R+RA + PVL+LTA+D + DRV GL+ GADDYL KPFA PEL AR++AL RR Sbjct: 62 VLKRLRARKSALPVLILTAQDGVEDRVRGLDAGADDYLTKPFALPELEARVRALTRRGTG 121 Query: 117 QPAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWG 176 QP + VG LS D A + I G+ +ELS RE +LE + R+VSK Q++D + WG Sbjct: 122 QPRCIEVGNLSYDQADRVVKICGQVVELSAREIGLLEVFILRVGRLVSKDQLVDHLCGWG 181 Query: 177 EDFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKSEA 217 E+ + NA+EVYV R+R K+ SGV I T+RG GY LE +A Sbjct: 182 EEVSSNAIEVYVHRLRKKLEASGVRIVTVRGLGYCLENPDA 222 >C4ZNL7.1 C4ZNL7_THASP Two component transcriptional regulator, winged helix family Length = 230 Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 108/221 (48%), Positives = 146/221 (66%), Gaps = 6/221 (2%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNGNDA----LSQRFNAAVLVLDIGLPGIDGFE 56 LL EDDPV+ DG+ R L G V V +G +A Q ++ +L+LD+GLP ++G E Sbjct: 4 LLAEDDPVIADGICRALRRGGCAVDHVADGMEADAALAGQGYD--LLILDLGLPRMNGIE 61 Query: 57 VLRRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSAP 116 VL+R+RA + PVL+LTA+D + DRV GL+ GADDYL KPFA PEL AR++AL RR Sbjct: 62 VLKRLRARKSAQPVLILTAQDGVDDRVRGLDAGADDYLTKPFALPELEARVRALTRRGTG 121 Query: 117 QPAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWG 176 QP + +G LS D A + I G+ +ELS RE +LE + R+VSK Q++D + WG Sbjct: 122 QPRCIEIGQLSYDQADRVVKIGGQLVELSAREIGLLEIFLLRVGRLVSKDQLVDHLCGWG 181 Query: 177 EDFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKSEA 217 E+ + NA+EVYV R+R K+ DSGV I T+RG GY LE +A Sbjct: 182 EEVSSNAIEVYVHRLRKKLEDSGVRIVTVRGLGYCLENPDA 222 >Q5P7G4.1 Q5P7G4_AROAE Two-component response regulatory protein Length = 228 Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 107/221 (48%), Positives = 148/221 (66%), Gaps = 6/221 (2%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNGNDA----LSQRFNAAVLVLDIGLPGIDGFE 56 LL EDD V+ +GL R L G+ V V +G++A +Q ++ +L+LD+GLP + G + Sbjct: 4 LLAEDDQVIANGLGRALKRSGYAVDHVASGSEADTALATQTYD--LLILDLGLPKLPGID 61 Query: 57 VLRRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSAP 116 VL+R+RA + PVL+LTA+D + +RV GL+ GADDYL KPFA PEL AR++AL RR Sbjct: 62 VLKRLRARKSALPVLILTAQDGVEERVRGLDAGADDYLTKPFALPELEARVRALTRRGTG 121 Query: 117 QPAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPWG 176 QP + +G LS D A + A I+G+ +ELS RE +LE R+VSK QI+D + WG Sbjct: 122 QPRCIEIGSLSYDQADRVAKINGQVVELSAREVGLLEVFALRVGRLVSKDQIVDHLCGWG 181 Query: 177 EDFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKSEA 217 E+ + NA+EVYV R+R K+ DSGV I T+RG GY LE +A Sbjct: 182 EEVSSNAIEVYVHRLRKKLEDSGVRIVTVRGLGYCLENPDA 222 >A3N689.1 A3N689_BURP6 DNA-binding response regulator Length = 247 Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 149/220 (67%), Gaps = 7/220 (3%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNG---NDALS-QRFNAAVLVLDIGLPGIDGFE 56 L+ EDD +L DGL+R L G+ V V NG + ALS Q F+ +L+LD+GLP + G E Sbjct: 4 LIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFD--LLILDLGLPKMSGLE 61 Query: 57 VLRRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSA- 115 VLRR+RA +N PVL+LTA D++ +RV GL+LGADDY+ KPFA EL AR++AL RR A Sbjct: 62 VLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGAG 121 Query: 116 PQPAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPW 175 P + G LS D + A + R +ELS RE +LE L+Q R+VSK+Q++D + W Sbjct: 122 GGPTVVRHGSLSFDQVGRIAYANERMLELSARELGLLEVLLQRIGRLVSKEQLVDHLCEW 181 Query: 176 GEDFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKS 215 GE+ + NA+EVYV R+R KI SGV I T+RG GY LEK+ Sbjct: 182 GEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKA 221 >Q63WW6.1 Q63WW6_BURPS Response regulator transcription regulatory protein Length = 247 Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 149/220 (67%), Gaps = 7/220 (3%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNG---NDALS-QRFNAAVLVLDIGLPGIDGFE 56 L+ EDD +L DGL+R L G+ V V NG + ALS Q F+ +L+LD+GLP + G E Sbjct: 4 LIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFD--LLILDLGLPRMSGLE 61 Query: 57 VLRRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSA- 115 VLRR+RA +N PVL+LTA D++ +RV GL+LGADDY+ KPFA EL AR++AL RR A Sbjct: 62 VLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGAG 121 Query: 116 PQPAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPW 175 P + G LS D + A + R +ELS RE +LE L+Q R+VSK+Q++D + W Sbjct: 122 GGPTVVRHGSLSFDQVGRIAYANERVLELSARELGLLEVLLQRIGRLVSKEQLVDHLCEW 181 Query: 176 GEDFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKS 215 GE+ + NA+EVYV R+R KI SGV I T+RG GY LEK+ Sbjct: 182 GEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKA 221 >A3NRX3.1 A3NRX3_BURP0 DNA-binding response regulator Length = 247 Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 149/220 (67%), Gaps = 7/220 (3%) Query: 1 LLVEDDPVLTDGLSRVLNSHGFTVHTVNNG---NDALS-QRFNAAVLVLDIGLPGIDGFE 56 L+ EDD +L DGL+R L G+ V V NG + ALS Q F+ +L+LD+GLP + G E Sbjct: 4 LIAEDDSILADGLTRSLRQSGYAVDHVRNGVEADTALSMQTFD--LLILDLGLPRMSGLE 61 Query: 57 VLRRMRAAGNNTPVLLLTARDTIPDRVHGLELGADDYLVKPFATPELVARIKALIRRSA- 115 VLRR+RA +N PVL+LTA D++ +RV GL+LGADDY+ KPFA EL AR++AL RR A Sbjct: 62 VLRRLRARNSNLPVLILTAADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGAG 121 Query: 116 PQPAQLTVGGLSLDNATKRADIDGRKIELSLREWTVLEYLMQHASRVVSKQQIIDAVLPW 175 P + G LS D + A + R +ELS RE +LE L+Q R+VSK+Q++D + W Sbjct: 122 GGPTVVRHGSLSFDQVGRIAYANERVLELSARELGLLEVLLQRIGRLVSKEQLVDHLCEW 181 Query: 176 GEDFTINAVEVYVSRIRLKIADSGVAIRTIRGFGYMLEKS 215 GE+ + NA+EVYV R+R KI SGV I T+RG GY LEK+ Sbjct: 182 GEEVSNNAIEVYVHRLRKKIEPSGVRITTVRGLGYCLEKA 221