BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0100.p (123 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IT30.1 D8IT30_HERSS Small multidrug resistance transmembrane p... 236 9e-61 F1W2Q1.1 F1W2Q1_9BURK Putative small multidrug resistance transm... 191 2e-47 D8NJS4.1 D8NJS4_RALSO Putative small multidrug resistance transm... 162 2e-38 E2T2F3.1 E2T2F3_9RALS Membrane protein 161 3e-38 B2UAS6.1 B2UAS6_RALPJ Small multidrug resistance protein 160 5e-38 C6BH18.1 C6BH18_RALP1 Putative small multidrug resistance transm... 160 7e-38 D5W7Q6.1 D5W7Q6_BURSC Putative uncharacterized protein 158 2e-37 B5WNF4.1 B5WNF4_9BURK Small multidrug resistance protein 157 4e-37 B9C704.1 B9C704_9BURK Putative membrane protein 157 6e-37 B9BYE3.1 B9BYE3_9BURK Putative membrane protein 157 6e-37 >D8IT30.1 D8IT30_HERSS Small multidrug resistance transmembrane protein Length = 123 Score = 236 bits (602), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 122/123 (99%), Positives = 122/123 (99%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTA NWFSTGLKLAMQLPIIGGLSCY Sbjct: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAENWFSTGLKLAMQLPIIGGLSCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL Sbjct: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 Query: 121 TRS 123 TRS Sbjct: 121 TRS 123 >F1W2Q1.1 F1W2Q1_9BURK Putative small multidrug resistance transmembrane protein Length = 124 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 92/106 (86%), Positives = 100/106 (94%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFGFI GICLNA+AQLLLKAGTNAVGAIHLTA NWFSTG+KLA QLPI+GGL+CY Sbjct: 2 MNLPTFGFILTGICLNAIAQLLLKAGTNAVGAIHLTAENWFSTGIKLATQLPILGGLTCY 61 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQR 106 V+SV+VWIIGLSRVDVT+AYPMLSLGYIINAVGAWYFLGE VS+QR Sbjct: 62 VVSVLVWIIGLSRVDVTIAYPMLSLGYIINAVGAWYFLGEMVSMQR 107 >D8NJS4.1 D8NJS4_RALSO Putative small multidrug resistance transmembrane protein Length = 123 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 80/123 (65%), Positives = 96/123 (78%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFG I G+ LNA AQLLLKAG NA+G + N G+KLA QLPIIGGL+CY Sbjct: 1 MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLTCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWI+GLSRVDVT+AYPMLSLGY++NA+ AWY GE ++ QRL+ I +I+VGV +L Sbjct: 61 VISVVVWILGLSRVDVTIAYPMLSLGYVVNAILAWYLFGEVLTAQRLIGIAIILVGVFVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >E2T2F3.1 E2T2F3_9RALS Membrane protein Length = 123 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 81/123 (65%), Positives = 96/123 (78%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFG I G+ LNA AQLLLKAG N +G +A N G+KLA Q PIIGGLSCY Sbjct: 1 MNLVTFGLILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIIGGLSCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWI+GLSRVDVT+AYPMLSLGY++NA AWY GE +S+QRL+ I +I+VGV++L Sbjct: 61 VISVVVWILGLSRVDVTIAYPMLSLGYVVNAFLAWYLFGEVLSVQRLIGIAIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >B2UAS6.1 B2UAS6_RALPJ Small multidrug resistance protein Length = 123 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 80/123 (65%), Positives = 96/123 (78%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFG I G+ LNA AQLLLKAG N +G +A N G+KLA Q PI+GGLSCY Sbjct: 1 MNLVTFGLILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIVGGLSCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWI+GLSRVDVT+AYPMLSLGY++NA AWY GE +S+QRL+ I +I+VGV++L Sbjct: 61 VISVVVWILGLSRVDVTIAYPMLSLGYVVNAFLAWYLFGEVLSVQRLIGIAIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >C6BH18.1 C6BH18_RALP1 Putative small multidrug resistance transmembrane protein Length = 123 Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 80/123 (65%), Positives = 96/123 (78%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFG I G+ LNA AQLLLKAG N +G +A N G+KLA Q PIIGGLSCY Sbjct: 1 MNLVTFGLILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIIGGLSCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWI+GLSRVDVT+AYPMLSLGY++NA AWY GE +++QRL+ I +I+VGV++L Sbjct: 61 VISVVVWILGLSRVDVTIAYPMLSLGYVVNAFLAWYLFGEVLTVQRLIGIAIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >D5W7Q6.1 D5W7Q6_BURSC Putative uncharacterized protein Length = 123 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/123 (65%), Positives = 95/123 (77%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MN + I AG+ LNA AQLLLKAGTNAVG T N G KLA Q PIIGGL+CY Sbjct: 1 MNPISLFCILAGVTLNAGAQLLLKAGTNAVGHFEFTRANILPIGFKLATQPPIIGGLACY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISV VWIIGLSRVDV++AYPMLSLGY++NA+ AWY GE +S+Q+L+ IG+I+VGVV+L Sbjct: 61 VISVAVWIIGLSRVDVSIAYPMLSLGYVVNAIAAWYLFGEVMSVQKLVGIGIILVGVVVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >B5WNF4.1 B5WNF4_9BURK Small multidrug resistance protein Length = 123 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 78/123 (63%), Positives = 95/123 (77%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MN + I AG+ LNA AQLLLKAGTNAVG T N G KLA Q PIIGGL+CY Sbjct: 1 MNPISLFCILAGVTLNAGAQLLLKAGTNAVGHFEFTRANILPIGFKLATQPPIIGGLACY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 V+SV VWIIGLSRVDV++AYPMLSLGY++NA+ AWY GE +S+Q+L+ IG+I++GVV+L Sbjct: 61 VVSVAVWIIGLSRVDVSIAYPMLSLGYVVNAIAAWYLFGEVMSVQKLVGIGIILIGVVVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >B9C704.1 B9C704_9BURK Putative membrane protein Length = 123 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 78/123 (63%), Positives = 95/123 (77%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MN +F I G+ LNA AQLLLKAG NAVG + N GLK+A QLPIIGGL CY Sbjct: 1 MNPISFVCIITGVLLNACAQLLLKAGVNAVGHFEFSRANIIPVGLKIATQLPIIGGLGCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 V+SVVVWI+GLSRVDV++AYPMLSLGY++NA AWY GE +S+QRL+ IG+I+VGV++L Sbjct: 61 VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >B9BYE3.1 B9BYE3_9BURK Putative membrane protein Length = 123 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 78/123 (63%), Positives = 95/123 (77%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MN +F I G+ LNA AQLLLKAG NAVG + N GLK+A QLPIIGGL CY Sbjct: 1 MNPISFVCIITGVLLNACAQLLLKAGVNAVGHFEFSRANIIPVGLKIATQLPIIGGLGCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 V+SVVVWI+GLSRVDV++AYPMLSLGY++NA AWY GE +S+QRL+ IG+I+VGV++L Sbjct: 61 VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123