BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0086.p (121 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IT15.1 D8IT15_HERSS 30S ribosomal protein S6 252 1e-65 A2RPY5.1 A2RPY5_HERSE 30S ribosomal protein S6 252 1e-65 A6SXJ4.1 RS6_JANMA 30S ribosomal protein S6 229 9e-59 A4G712.1 RS6_HERAR 30S ribosomal protein S6 229 1e-58 F1W3J8.1 F1W3J8_9BURK SSU ribosomal protein S6p 218 2e-55 C3XA42.1 C3XA42_OXAFO 30S ribosomal protein S6 204 3e-51 C3X264.1 C3X264_OXAFO 30S ribosomal protein S6 203 9e-51 B5WQT2.1 B5WQT2_9BURK 30S ribosomal protein S6 201 3e-50 E1T6P4.1 E1T6P4_BURSG 30S ribosomal protein S6 201 4e-50 E8YF44.1 E8YF44_9BURK Ribosomal protein S6 201 4e-50 >D8IT15.1 D8IT15_HERSS 30S ribosomal protein S6 Length = 121 Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA Sbjct: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 Query: 121 A 121 A Sbjct: 121 A 121 >A2RPY5.1 A2RPY5_HERSE 30S ribosomal protein S6 Length = 121 Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA Sbjct: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 Query: 121 A 121 A Sbjct: 121 A 121 >A6SXJ4.1 RS6_JANMA 30S ribosomal protein S6 Length = 122 Score = 229 bits (584), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 110/122 (90%), Positives = 114/122 (93%), Gaps = 1/122 (0%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKGIVT RGG +HRVEDWGRRQ+AY IQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTARGGVIHRVEDWGRRQMAYMIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKS-RTEAP 119 CLNIE D ETLAEIETGFKFNDAVLRHLTVKMKKAET PSP++KAVQKEDAAKS R EAP Sbjct: 61 CLNIECDGETLAEIETGFKFNDAVLRHLTVKMKKAETAPSPMMKAVQKEDAAKSHRAEAP 120 Query: 120 AA 121 AA Sbjct: 121 AA 122 >A4G712.1 RS6_HERAR 30S ribosomal protein S6 Length = 122 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 111/122 (90%), Positives = 114/122 (93%), Gaps = 1/122 (0%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKGIVT RGG VHRVEDWGRRQ+AY IQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTARGGVVHRVEDWGRRQMAYLIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKS-RTEAP 119 CLNIE D ETL EIETGFKFNDAVLRHLTVKMKKAET PSP++KAVQKEDAAKS RTEAP Sbjct: 61 CLNIECDGETLTEIETGFKFNDAVLRHLTVKMKKAETAPSPMMKAVQKEDAAKSHRTEAP 120 Query: 120 AA 121 AA Sbjct: 121 AA 122 >F1W3J8.1 F1W3J8_9BURK SSU ribosomal protein S6p Length = 122 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 103/122 (84%), Positives = 111/122 (90%), Gaps = 1/122 (0%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK +V G VHRVEDWGRRQ+AY IQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKAVVAAHSGVVHRVEDWGRRQMAYLIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKS-RTEAP 119 C+NIE D+ETL EIETGFKFNDAVLRHLTVK+KKAET PSP++KAVQKEDAAKS R+EAP Sbjct: 61 CMNIECDNETLVEIETGFKFNDAVLRHLTVKLKKAETAPSPMMKAVQKEDAAKSHRSEAP 120 Query: 120 AA 121 AA Sbjct: 121 AA 122 >C3XA42.1 C3XA42_OXAFO 30S ribosomal protein S6 Length = 121 Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 94/121 (77%), Positives = 104/121 (85%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK VTTRGGK+HRVEDWGRRQLAY I K AKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKNSVTTRGGKIHRVEDWGRRQLAYMINKFAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 +NIE D ETL E+ET FKFNDA+LRHLTVKMK AETGPSP++K+ QKE+A K+ E + Sbjct: 61 LMNIECDGETLNELETAFKFNDAILRHLTVKMKHAETGPSPMMKSAQKEEAPKAAAEQAS 120 Query: 121 A 121 A Sbjct: 121 A 121 >C3X264.1 C3X264_OXAFO 30S ribosomal protein S6 Length = 125 Score = 203 bits (516), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 94/120 (78%), Positives = 105/120 (87%), Gaps = 2/120 (1%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK VT+RGGK+HRVEDWGRRQLAY I K AKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKNSVTSRGGKIHRVEDWGRRQLAYMINKFAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 +NIE D ETL E+ET FKFNDA+LRHLTVKMK AETGPSP++K+ QKE++AK+ APA Sbjct: 61 LMNIECDGETLNELETAFKFNDAILRHLTVKMKHAETGPSPMMKSAQKEESAKA--PAPA 118 >B5WQT2.1 B5WQT2_9BURK 30S ribosomal protein S6 Length = 124 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 91/119 (76%), Positives = 103/119 (86%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKG +T+ GG++HRVEDWGRRQLAY I+KLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAP 119 C+NIE D TL E+E FKFNDAVLRHL VK+KKAETGPSP++K VQ+E+A KS P Sbjct: 61 CMNIECDQTTLDELEHAFKFNDAVLRHLIVKLKKAETGPSPMMKEVQREEAKKSAAAQP 119 >E1T6P4.1 E1T6P4_BURSG 30S ribosomal protein S6 Length = 124 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 90/120 (75%), Positives = 103/120 (85%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK +T+ GG++HR+EDWGRRQLAY I+KLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKSTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 C+NIE D TL E+E FKFNDAVLRHL VKMKKAETGPSP++K VQ+E+A KS P+ Sbjct: 61 CMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREEAKKSAATQPS 120 >E8YF44.1 E8YF44_9BURK Ribosomal protein S6 Length = 124 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 90/120 (75%), Positives = 103/120 (85%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK +T+ GG++HR+EDWGRRQLAY I+KLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKSTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 C+NIE D TL E+E FKFNDAVLRHL VKMKKAETGPSP++K VQ+E+A KS P+ Sbjct: 61 CMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREEAKKSAATQPS 120