BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0072.p (585 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IT00.1 D8IT00_HERSS Putative uncharacterized protein 1157 0.0 F1VUG6.1 F1VUG6_9BURK Flagellar M-ring protein fliF 656 0.0 A6SXY4.1 A6SXY4_JANMA Flagellar basal-body M-ring protein 648 0.0 E6QR78.1 E6QR78_9ZZZZ Flagellar M-ring protein 635 e-180 A4G690.2 A4G690_HERAR Flagellar M-ring protein 630 e-178 Q3SIH5.1 Q3SIH5_THIDA Flagellar M-ring protein FliF 624 e-177 E4QKJ7.1 E4QKJ7_METS6 Flagellar M-ring protein FliF 611 e-172 C6XAS2.1 C6XAS2_METSD Flagellar M-ring protein FliF 610 e-172 C6WV87.1 C6WV87_METML Flagellar M-ring protein FliF 593 e-167 D7DQ15.1 D7DQ15_METS0 Flagellar M-ring protein FliF 582 e-164 >D8IT00.1 D8IT00_HERSS Putative uncharacterized protein Length = 569 Score = 1157 bits (2994), Expect = 0.0, Method: Compositional matrix adjust. Identities = 569/569 (100%), Positives = 569/569 (100%) Query: 17 MPGSQPAQNGMMGYARSPQGKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDG 76 MPGSQPAQNGMMGYARSPQGKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDG Sbjct: 1 MPGSQPAQNGMMGYARSPQGKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDG 60 Query: 77 GAIVASLQQMNVPYKYSDGGTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGI 136 GAIVASLQQMNVPYKYSDGGTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGI Sbjct: 61 GAIVASLQQMNVPYKYSDGGTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGI 120 Query: 137 SQFLEQVNFQRALEGELARSVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPG 196 SQFLEQVNFQRALEGELARSVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPG Sbjct: 121 SQFLEQVNFQRALEGELARSVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPG 180 Query: 197 RYLDPQQVSAIVHLVASSVPELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDM 256 RYLDPQQVSAIVHLVASSVPELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDM Sbjct: 181 RYLDPQQVSAIVHLVASSVPELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDM 240 Query: 257 QQDIVKRVESIIAPIVGNGNVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEA 316 QQDIVKRVESIIAPIVGNGNVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEA Sbjct: 241 QQDIVKRVESIIAPIVGNGNVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEA 300 Query: 317 NSASNGTSGVPGALSNQPPAPATAPIVNPAVANGAANQTGAATPNGALPTPTATGNSRKD 376 NSASNGTSGVPGALSNQPPAPATAPIVNPAVANGAANQTGAATPNGALPTPTATGNSRKD Sbjct: 301 NSASNGTSGVPGALSNQPPAPATAPIVNPAVANGAANQTGAATPNGALPTPTATGNSRKD 360 Query: 377 ETINYEVDKTVRYTQQPMGGVRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVK 436 ETINYEVDKTVRYTQQPMGGVRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVK Sbjct: 361 ETINYEVDKTVRYTQQPMGGVRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVK 420 Query: 437 EAMGYNKDRGDSLNVVNTQFSTDMEPEVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRV 496 EAMGYNKDRGDSLNVVNTQFSTDMEPEVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRV Sbjct: 421 EAMGYNKDRGDSLNVVNTQFSTDMEPEVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRV 480 Query: 497 LRPIVWKLSGREERERLAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLSGESEVDERAQY 556 LRPIVWKLSGREERERLAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLSGESEVDERAQY Sbjct: 481 LRPIVWKLSGREERERLAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLSGESEVDERAQY 540 Query: 557 KANLETAKQWAKNDPKLVASIIKSWVNNE 585 KANLETAKQWAKNDPKLVASIIKSWVNNE Sbjct: 541 KANLETAKQWAKNDPKLVASIIKSWVNNE 569 >F1VUG6.1 F1VUG6_9BURK Flagellar M-ring protein fliF Length = 564 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/564 (62%), Positives = 435/564 (77%), Gaps = 19/564 (3%) Query: 25 NGMMGYARSPQGKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDGGAIVASLQ 84 N ++ +A S G+ +LL++ AA +AVMAG+W+WSQ+ +YRVLFSNF DRDGGAIV LQ Sbjct: 12 NPLISFAESQGGRNLLLMLGAAIVIAVMAGVWMWSQQPDYRVLFSNFTDRDGGAIVTQLQ 71 Query: 85 QMNVPYKYSDGGTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGISQFLEQVN 144 QMNVPYK+++GG AILVP + VHDARL++AA GLPKGGNVGFELMENQKLG+SQFLEQVN Sbjct: 72 QMNVPYKFAEGGGAILVPADQVHDARLRIAAMGLPKGGNVGFELMENQKLGVSQFLEQVN 131 Query: 145 FQRALEGELARSVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPGRYLDPQQV 204 FQRALEGELARSV S+ +V++ARVHLA+PKASVFVRDQQKPTASVVL+L PGR L QQV Sbjct: 132 FQRALEGELARSVQSIGAVESARVHLAMPKASVFVRDQQKPTASVVLNLNPGRSLSEQQV 191 Query: 205 SAIVHLVASSVPELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDMQQDIVKRV 264 SAIVHLVASSVP+L P ++++DQNGNLLSDT+K A+ LDPTQLKY+Q++QQ+IV+R+ Sbjct: 192 SAIVHLVASSVPDLPPGNISVIDQNGNLLSDTSKAAKATGLDPTQLKYIQEVQQNIVRRI 251 Query: 265 ESIIAPIVGNGNVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEANSASNGTS 324 ESII PIVG NVRAEATAD+DFS SEQA+E YKPN + + +RS+QSSE+ ++ G Sbjct: 252 ESIITPIVGPNNVRAEATADIDFSTSEQAAETYKPNSPPNQSTMRSQQSSESQGSNPGAG 311 Query: 325 GVPGALSNQPPAPATAPIVNPAVANGAANQTGAATPNGALPTPTATGNSRKDETINYEVD 384 GVPGALSNQP A ATAPI PA A A G +T GA T TA S+KD T+NYEVD Sbjct: 312 GVPGALSNQPAANATAPINPPAPAPAPAAGQGVST--GA--TATAAVPSQKDMTVNYEVD 367 Query: 385 KTVRYTQQPMGGVRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVKEAMGYNKD 444 KTVRY QQPMGGV+R++VAVVVNYK+ D GK+ PLTEAER QITDLVKEAMG+NKD Sbjct: 368 KTVRYVQQPMGGVKRISVAVVVNYKQVTDKAGKVTATPLTEAERVQITDLVKEAMGFNKD 427 Query: 445 RGDSLNVVNTQFS---TDMEPEVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRVLRPIV 501 RGD+LNVVN+ F+ ++ PEVP+WK+P MI LAKE+GKY+L LL+L+F VLRP++ Sbjct: 428 RGDTLNVVNSAFAGVPKEVFPEVPIWKRPEMIQLAKELGKYLLGGIALLYLFFGVLRPML 487 Query: 502 WKLSGREERER--LAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLSGESEVDERAQYKAN 559 K + + + R + E EAE A AA + P +++ Y+ N Sbjct: 488 KKFNTPQPKIRAVVDDEDDEAETPEMRAMHAAERTTEVPAESASMA----------YQQN 537 Query: 560 LETAKQWAKNDPKLVASIIKSWVN 583 L+ AKQ AK+DPK+VA+I+K+WV+ Sbjct: 538 LDLAKQLAKDDPKVVANIVKNWVS 561 >A6SXY4.1 A6SXY4_JANMA Flagellar basal-body M-ring protein Length = 585 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/595 (57%), Positives = 424/595 (71%), Gaps = 34/595 (5%) Query: 9 GELGTNEAMPGSQPA----QNGMMGYARSPQGKRILLIIAAAATLAVMAGIWLWSQKVEY 64 GE G +P A QN M A+SP G++++L++ +AA +A+M + LWSQK EY Sbjct: 7 GEGGLPPGVPAEASATTNMQNSFMDMAKSPNGRKVMLMLGSAAVIAIMIALVLWSQKPEY 66 Query: 65 RVLFSNFNDRDGGAIVASLQQMNVPYKYSDGGTAILVPENMVHDARLKLAAQGLPKGGNV 124 +VLFSNF+DRDGGAI++SLQ NVPYK+++GG AILVP + VH+ RLKLAA+GLPKGG V Sbjct: 67 KVLFSNFSDRDGGAIMSSLQASNVPYKFAEGGGAILVPADKVHEIRLKLAAEGLPKGGGV 126 Query: 125 GFELMENQKLGISQFLEQVNFQRALEGELARSVGSLASVQTARVHLALPKASVFVRDQQK 184 GFELMENQKLG+SQFLEQVNFQRALEGELARS+ S+ +VQ ARVHLA+PKASVFVRDQQK Sbjct: 127 GFELMENQKLGVSQFLEQVNFQRALEGELARSIQSVGAVQAARVHLAMPKASVFVRDQQK 186 Query: 185 PTASVVLSLYPGRYLDPQQVSAIVHLVASSVPELSPKAVTIVDQNGNLLSDTTKQAQPNT 244 PTASV+L+L GR LD QQVSAIVHLVASSVPELSPK VTIVDQ+GNLLS+T K A NT Sbjct: 187 PTASVLLNLRQGRALDQQQVSAIVHLVASSVPELSPKNVTIVDQSGNLLSETNKPAGSNT 246 Query: 245 LDPTQLKYVQDMQQDIVKRVESIIAPIVGNGNVRAEATADVDFSRSEQASEAYKPNQTKD 304 LDP+QLKYVQ++QQ I KR+ESII PIVG N+RAEATADVDFS SEQA+E YKPNQ + Sbjct: 247 LDPSQLKYVQELQQSITKRIESIITPIVGASNIRAEATADVDFSTSEQAAEIYKPNQVPN 306 Query: 305 SAAVRSKQSSEANSASNGTSGVPGALSNQPPAPATAPIVNPAVANGAANQTGA------- 357 SA VRS Q+SE+ G SGVPGAL+NQP ATAP+ P +A T Sbjct: 307 SATVRSLQTSESRGNGTGASGVPGALTNQPAPNATAPLTAPPLAADGTPSTATNPPAPGT 366 Query: 358 ----ATPNGALPTPTATGNSRKDETINYEVDKTVRYTQQPMGGVRRLTVAVVVNYKRTMD 413 A A ++KD T N+EVDKTVRY QQPMGG++RL+VAVVVNYKR + Sbjct: 367 PAAAAAAAAAATAAANATPTQKDTTTNFEVDKTVRYVQQPMGGLKRLSVAVVVNYKRVVA 426 Query: 414 NTGKIVMRPLTEAERNQITDLVKEAMGYNKDRGDSLNVVNTQFSTDMEPEV---PLWKQP 470 GK+ + PL+E E+NQITDLVKEAMGYNKDRGD+LNVVN+ F+ + E+ PLW++P Sbjct: 427 KDGKVTIAPLSETEKNQITDLVKEAMGYNKDRGDTLNVVNSPFAGVEKDEIVQPPLWERP 486 Query: 471 GMIDLAKEIGKYVLVAAVLLFLYFRVLRPIVWKLSGREERERLAKEKAEAEAAAAAAAVA 530 +I++A + KY+ + VL LY ++L+P++ KL+ E LA E AEA Sbjct: 487 EIIEMAIQAAKYLAIGIVLFLLYRKLLKPMLNKLN-PPPPEPLALEDESAEALEKMHLEE 545 Query: 531 AGFDPDDPDAIVNLSGESEVDERAQYKANLETAKQWAKNDPKLVASIIKSWVNNE 585 G P I N Y+ NLE AK+ A+ DPK+VA+I+KSWV N+ Sbjct: 546 DG----KPMGIQN-----------TYQQNLEAAKELARKDPKVVANIVKSWVGND 585 >E6QR78.1 E6QR78_9ZZZZ Flagellar M-ring protein Length = 552 Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust. Identities = 325/566 (57%), Positives = 408/566 (72%), Gaps = 44/566 (7%) Query: 30 YARSPQGKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDGGAIVASLQQMNVP 89 + +S G+++ L++ AA +A+MAGIW+WSQK +YRVLFSNF+D+DGGAIVA LQQMNVP Sbjct: 16 FTQSANGRKLFLMLGIAAVVAIMAGIWMWSQKPDYRVLFSNFSDKDGGAIVAVLQQMNVP 75 Query: 90 YKYSDGGTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGISQFLEQVNFQRAL 149 YKYSDGG AILVP + VHD RLKLAAQ LPKGGNVGFELMENQKLG SQFLEQVNFQRAL Sbjct: 76 YKYSDGGGAILVPADQVHDLRLKLAAQDLPKGGNVGFELMENQKLGTSQFLEQVNFQRAL 135 Query: 150 EGELARSVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPGRYLDPQQVSAIVH 209 EGELA+++ ++++VQ ARVHLALPK+SVFVR+QQKPTASV++ L PGR LDP QV+AI+H Sbjct: 136 EGELAQTIQAISAVQAARVHLALPKSSVFVREQQKPTASVLIDLAPGRALDPAQVNAIIH 195 Query: 210 LVASSVPELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDMQQDIVKRVESIIA 269 L+ASSVP+L+ VTIVDQNGNLLSD T ++ + LDPTQLKY+Q +Q +I +R+E+II Sbjct: 196 LLASSVPDLTADNVTIVDQNGNLLSDNTSKSGNDGLDPTQLKYIQTVQHEIAERIEAIIT 255 Query: 270 PIVGNGNVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEANSASNGTSGVPGA 329 PIVG NV AE TAD+DFS SEQA+E YKPN D+ A+RS+Q+SE + +N SG+PGA Sbjct: 256 PIVGANNVHAEVTADIDFSHSEQAAETYKPNPAPDT-AIRSQQTSETMNDNNTASGIPGA 314 Query: 330 LSNQPPAPATAPI-----VNPAVANGAANQTGAATPNGALPTPTATGNSRKDETINYEVD 384 LSNQPPAPATAPI PA+ + + N+T P P KD T NYEVD Sbjct: 315 LSNQPPAPATAPINAPATSTPAIPSASGNKT---------PAPDNPSIVHKDATTNYEVD 365 Query: 385 KTVRYTQQPMGGVRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVKEAMGYNKD 444 KT+RY QQPMGG++RL+VAVVVNY+ + D GK+ PLT ++ QI+DL KEAMGY++ Sbjct: 366 KTIRYVQQPMGGLKRLSVAVVVNYQTSTDKNGKLKKVPLTALQKTQISDLAKEAMGYDQT 425 Query: 445 RGDSLNVVNTQFSTDME--PEVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRVLRPIVW 502 RGD+LNVVN+ F+T E E P WKQP I+LAKE G+Y+L LL++Y + LRP+ Sbjct: 426 RGDTLNVVNSPFATTREVIAETPWWKQPDNIELAKEAGRYLLAFIALLYVYKKFLRPMFD 485 Query: 503 KL-----SGREERERLAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLSGESEVDERAQYK 557 KL EE E +E E + V+LS A Y Sbjct: 486 KLMAPPVHSAEENEPEFDADSEVEGSK-----------------VHLSHRD-----ANYH 523 Query: 558 ANLETAKQWAKNDPKLVASIIKSWVN 583 NLE KQ AK++PK+VA++IK+WVN Sbjct: 524 TNLEKVKQLAKDNPKVVANVIKTWVN 549 >A4G690.2 A4G690_HERAR Flagellar M-ring protein Length = 562 Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust. Identities = 338/578 (58%), Positives = 418/578 (72%), Gaps = 49/578 (8%) Query: 27 MMGYARSPQGKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDGGAIVASLQQM 86 ++ A+SP G++ LL++ AA +AVM G+ LW QK EYRVLFSNF+DRDGGAI+ SLQ Sbjct: 15 ILNMAKSPNGRKFLLMVGVAAVIAVMIGLVLWGQKPEYRVLFSNFSDRDGGAIMTSLQAA 74 Query: 87 NVPYKYSDGGTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGISQFLEQVNFQ 146 NVPYK+++GG AILVP + VH+ RLKLAA+GLPKGG+VGFELMENQKLG+SQFLEQVNFQ Sbjct: 75 NVPYKFAEGGGAILVPADKVHEIRLKLAAEGLPKGGSVGFELMENQKLGVSQFLEQVNFQ 134 Query: 147 RALEGELARSVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPGRYLDPQQVSA 206 RALEGELARS+ S+ +VQ ARVHLALPKASVFVRDQQKPTASV+L+L+ GR+LD QQVSA Sbjct: 135 RALEGELARSIQSVGAVQAARVHLALPKASVFVRDQQKPTASVLLNLHAGRFLDQQQVSA 194 Query: 207 IVHLVASSVPELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDMQQDIVKRVES 266 IVHLVASSVPELSPK VTIVDQ GNLLS+ K A NTLDP+QLKYVQ++QQ+I KR+ES Sbjct: 195 IVHLVASSVPELSPKNVTIVDQAGNLLSENNKPAGTNTLDPSQLKYVQELQQNIAKRIES 254 Query: 267 IIAPIVGNGNVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEANSASNGTSGV 326 II PIVG NVRAEATADVDFS SEQA+E YKPNQ SA VRS+Q+SE+ + SN +GV Sbjct: 255 IITPIVGLNNVRAEATADVDFSTSEQAAEIYKPNQVPSSATVRSQQTSESTNGSNNATGV 314 Query: 327 PGALSNQPPAPATAPI-VNPAVANGAANQTGAATPNGALPTPTATGNS--RKDETINYEV 383 PGAL+NQP ATAP+ P TP T TA + ++D T NYEV Sbjct: 315 PGALTNQPAPAATAPLNTTPQTTAAPGTPGAPGTPGAPAATATAPQATPIQRDTTTNYEV 374 Query: 384 DKTVRYTQQPMGGVRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVKEAMGYNK 443 DKT+RY QQPMGG++RL+VAVVVNYKR + GK+ PLTE E+ QITDLV+EAMGYNK Sbjct: 375 DKTIRYVQQPMGGLKRLSVAVVVNYKRVVGKDGKVSFLPLTEIEKTQITDLVREAMGYNK 434 Query: 444 DRGDSLNVVNTQFS---TDMEPEVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRVLRPI 500 DRGD+LNVVN+ F+ + P++PLW++P ID+ + KY+L+ VLL LYF+VL+P+ Sbjct: 435 DRGDTLNVVNSPFAGSNKEEAPKLPLWERPEAIDMGMQGAKYLLLGIVLLILYFKVLKPL 494 Query: 501 VWKLSGREERERLAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLSGE-----SEVDERA- 554 + KL+ P A+ + SG+ E++E Sbjct: 495 LNKLN------------------------------PPPLALTDESGQPVGMAQELEEEVG 524 Query: 555 -------QYKANLETAKQWAKNDPKLVASIIKSWVNNE 585 Y+ NLE AK+ A+ DPK+VA+I+K+WV NE Sbjct: 525 PMGIHMHSYQQNLEAAKELARQDPKVVANIVKAWVGNE 562 >Q3SIH5.1 Q3SIH5_THIDA Flagellar M-ring protein FliF Length = 548 Score = 624 bits (1610), Expect = e-177, Method: Compositional matrix adjust. Identities = 332/570 (58%), Positives = 429/570 (75%), Gaps = 48/570 (8%) Query: 27 MMGYARSPQGKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDGGAIVASLQQM 86 +M + R+ G++ILL++ AA++AVMA +W+W Q+ EYRVLFSNF+DRDGGAIVA L++M Sbjct: 13 VMEFTRTAGGRKILLMLGVAASVAVMAAVWMWGQQPEYRVLFSNFSDRDGGAIVAELEKM 72 Query: 87 NVPYKYSDGGTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGISQFLEQVNFQ 146 NVPYKY++GG A+LVP + VHDARLKLA+QGLPKGGNVGFELMENQ+LG SQF+EQVNFQ Sbjct: 73 NVPYKYAEGGGAVLVPADRVHDARLKLASQGLPKGGNVGFELMENQRLGASQFVEQVNFQ 132 Query: 147 RALEGELARSVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPGRYLDPQQVSA 206 RA+EGELARS+ S+++VQ ARVHLALPK S+FV +Q++PTASV+L+L+PGR LDPQQVSA Sbjct: 133 RAMEGELARSIESVSAVQAARVHLALPKDSIFVSEQKQPTASVLLNLHPGRALDPQQVSA 192 Query: 207 IVHLVASSVPELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDMQQDIVKRVES 266 IVHLVASSVPEL+ K VT+VDQNGNLLSD K + N +DP+Q+KYVQ++QQD+V+R+ES Sbjct: 193 IVHLVASSVPELATKNVTVVDQNGNLLSDAGKAPRVNGMDPSQIKYVQELQQDVVQRIES 252 Query: 267 IIAPIVGNGNVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEANSASNGTSGV 326 II PIVG GNVRAEATADVDFSRSEQA E+YKPNQT D+ A+RS+Q+SE+ + S +GV Sbjct: 253 IITPIVGPGNVRAEATADVDFSRSEQAVESYKPNQTPDAMAIRSQQTSESLNGSANPAGV 312 Query: 327 PGALSNQPPAPATAPIVNPAVANGAANQTGAATPNGALPTPTATGNSRKDETINYEVDKT 386 PGAL NQPPAPATAPI P G ATP A ++RKD T+NYEVDKT Sbjct: 313 PGALINQPPAPATAPITVP----------GQATPAPAAAAAQPATSTRKDATVNYEVDKT 362 Query: 387 VRYTQQPMGGVRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVKEAMGYNKDRG 446 ++Y QQ GG++RL+V VVVNYK+T+D GK+ M+PL+EAE+ QIT+LVKEAMGYN+ RG Sbjct: 363 IQYVQQAGGGLKRLSVGVVVNYKKTVDKAGKVAMKPLSEAEKTQITNLVKEAMGYNQARG 422 Query: 447 DSLNVVNTQFSTDME---PEVPLWKQP---GMIDLAKEIGKYVLVAAVLLFLYFRVLRPI 500 D++NVVN+ F++ E P+ P WKQP D+A+ +GKY+L+ LL LY +V +P+ Sbjct: 423 DTVNVVNSPFASAQEEDLPQPPFWKQPEYAEYFDIARNVGKYLLMGIALLLLYLKVAKPL 482 Query: 501 VWKLSGREERERLAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLSGESEVDERA------ 554 + K+S E +A AA P+ P + L+ DERA Sbjct: 483 LKKMS-------------EQQALAA---------PNHPLHLEQLA----TDERAALPGQR 516 Query: 555 QYKANLETAKQWAKNDPKLVASIIKSWVNN 584 Y+ NL A++ A DP++VA+I+K+WV N Sbjct: 517 NYQENLSRAQRLANEDPRVVANIVKTWVAN 546 >E4QKJ7.1 E4QKJ7_METS6 Flagellar M-ring protein FliF Length = 580 Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust. Identities = 319/551 (57%), Positives = 401/551 (72%), Gaps = 38/551 (6%) Query: 55 IWLWSQKVEYRVLFSNFNDRDGGAIVASLQQMNVPYKYSDGGTAILVPENMVHDARLKLA 114 WLWSQ+ EYRVLFSN+ D+DGGAIVASL+QMN+PYK+S+ GTAILVP + VH RLKLA Sbjct: 48 FWLWSQQPEYRVLFSNYADKDGGAIVASLEQMNIPYKFSESGTAILVPASQVHQVRLKLA 107 Query: 115 AQGLPKGGNVGFELMENQKLGISQFLEQVNFQRALEGELARSVGSLASVQTARVHLALPK 174 AQGLPKGGN+GFEL+ENQK G+SQF+EQVNFQR LEGEL RS+ ++++V+ AR+HLA+PK Sbjct: 108 AQGLPKGGNIGFELLENQKFGVSQFVEQVNFQRGLEGELERSIQTISAVEVARIHLAIPK 167 Query: 175 ASVFVRDQQKPTASVVLSLYPGRYLDPQQVSAIVHLVASSVPELSPKAVTIVDQNGNLLS 234 SVFVRDQQKPTASV+L+L PGR LD QQVSAIVHLVASSVPEL VT+VDQNGNLLS Sbjct: 168 PSVFVRDQQKPTASVLLNLRPGRMLDQQQVSAIVHLVASSVPELPIANVTVVDQNGNLLS 227 Query: 235 DTTKQAQPNTLDPTQLKYVQDMQQDIVKRVESIIAPIVGNGNVRAEATADVDFSRSEQAS 294 DT K+A N LDPTQLKY+ ++QQ+IV+RVESIIAP+VG NV AEA+A+VDFS EQA+ Sbjct: 228 DTDKKAGRNNLDPTQLKYIDELQQNIVRRVESIIAPMVGAKNVHAEASAEVDFSTQEQAA 287 Query: 295 EAYKPNQTKDSAAVRSKQSSEANSAS-NGTSGVPGALSNQPPAPATAPIVNPAVANGAAN 353 E Y+PNQ D+ +VRS+QS+E+ S S G GVPGALSNQPPAPATAP+ AN A Sbjct: 288 ETYRPNQAPDAMSVRSQQSNESQSTSPAGVGGVPGALSNQPPAPATAPLNTAVPANAGAP 347 Query: 354 QTGAATPNGALPTPTATG----NSRKDETINYEVDKTVRYTQQPMGGVRRLTVAVVVNYK 409 G A AT N++K+ T NYE+DKT+RY QQPMGGV+RLTVAVVVN+K Sbjct: 348 GAGTPANAAAANAANATPAVPVNTQKNVTTNYELDKTIRYVQQPMGGVKRLTVAVVVNHK 407 Query: 410 RTMDNTGKIVMRPLTEAERNQITDLVKEAMGYNKDRGDSLNVVNTQFSTDM---EPEVPL 466 + +D GK+ RPLT+AE+ +I+DL K+AMG+N++RGDSL VVN+ F+ D P++PL Sbjct: 408 QVVDKNGKVTNRPLTDAEKTEISDLAKQAMGFNQERGDSLTVVNSSFAGDQIEAIPDLPL 467 Query: 467 WKQPGMIDLAKEIGKYVLVAAVLLFLYFRVLRPIVWKLSGREERERLAKEKAEAEAAAAA 526 WKQP I++AKE K V+ LY ++++P++ KL +E+E L Sbjct: 468 WKQPENIEMAKEWLKMAAGLLVIFLLYRKLMKPMMQKLVKSDEKEALP------------ 515 Query: 527 AAVAAGFDPDDPDAIVNLSGESEVDERAQ------------YKANLETAKQWAKNDPKLV 574 A G DD A+V L+G +E E Y+ NLE AKQ AK +PKLV Sbjct: 516 ---APG---DDDAAVVTLTGAAEGAEGENMVGVPRKLAAKGYEQNLEAAKQLAKENPKLV 569 Query: 575 ASIIKSWVNNE 585 AS++ +WV+ E Sbjct: 570 ASLVTNWVSKE 580 >C6XAS2.1 C6XAS2_METSD Flagellar M-ring protein FliF Length = 576 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 318/551 (57%), Positives = 401/551 (72%), Gaps = 38/551 (6%) Query: 55 IWLWSQKVEYRVLFSNFNDRDGGAIVASLQQMNVPYKYSDGGTAILVPENMVHDARLKLA 114 WLWSQ+ EYRVLFSN+ D+DGGAIVASL+QMN+PYK+S+ GTAILVP + VH RLKLA Sbjct: 44 FWLWSQQPEYRVLFSNYADKDGGAIVASLEQMNIPYKFSESGTAILVPASQVHQVRLKLA 103 Query: 115 AQGLPKGGNVGFELMENQKLGISQFLEQVNFQRALEGELARSVGSLASVQTARVHLALPK 174 AQGLPKGGN+GFEL+ENQK G+SQF+EQVNFQR LEGEL RS+ ++++V+ AR+HLA+PK Sbjct: 104 AQGLPKGGNIGFELLENQKFGVSQFVEQVNFQRGLEGELERSIQTISAVEVARIHLAIPK 163 Query: 175 ASVFVRDQQKPTASVVLSLYPGRYLDPQQVSAIVHLVASSVPELSPKAVTIVDQNGNLLS 234 SVFVRDQQKPTASV+L+L PGR LD QQVSAIVHLVASSVPEL VT+VDQNGNLLS Sbjct: 164 PSVFVRDQQKPTASVLLNLRPGRMLDQQQVSAIVHLVASSVPELPIANVTVVDQNGNLLS 223 Query: 235 DTTKQAQPNTLDPTQLKYVQDMQQDIVKRVESIIAPIVGNGNVRAEATADVDFSRSEQAS 294 DT K+A N LDPTQLKY+ ++QQ+IV+RVESIIAP+VG NV AEA+A+VDFS EQA+ Sbjct: 224 DTDKKAGRNNLDPTQLKYIDELQQNIVRRVESIIAPMVGAKNVHAEASAEVDFSTQEQAA 283 Query: 295 EAYKPNQTKDSAAVRSKQSSEANSAS-NGTSGVPGALSNQPPAPATAPIVNPAVANGAAN 353 E Y+PNQ D+ +VRS+QS+E+ S S G GVPGALSNQPPAPATAP+ AN A Sbjct: 284 ETYRPNQAPDAMSVRSQQSNESQSTSPAGVGGVPGALSNQPPAPATAPLNTAVPANAGAP 343 Query: 354 QTGAATPNGALPTPTATG----NSRKDETINYEVDKTVRYTQQPMGGVRRLTVAVVVNYK 409 G A AT N++K+ T NYE+DKT+RY QQPMGGV+RLTVAVVVN+K Sbjct: 344 GAGTPANAAAANAANATPAVPVNTQKNVTTNYELDKTIRYVQQPMGGVKRLTVAVVVNHK 403 Query: 410 RTMDNTGKIVMRPLTEAERNQITDLVKEAMGYNKDRGDSLNVVNTQFS---TDMEPEVPL 466 + +D GK+ RPLT+AE+ +I+DL K+AMG+N++RGDSL VVN+ F+ + P++PL Sbjct: 404 QVVDKNGKVTNRPLTDAEKTEISDLAKQAMGFNQERGDSLTVVNSSFAGEQIEAIPDLPL 463 Query: 467 WKQPGMIDLAKEIGKYVLVAAVLLFLYFRVLRPIVWKLSGREERERLAKEKAEAEAAAAA 526 WKQP I++AKE K V+ LY ++++P++ KL +E+E L Sbjct: 464 WKQPENIEMAKEWLKMAAGLLVIFLLYRKLMKPMMQKLVKSDEKEALP------------ 511 Query: 527 AAVAAGFDPDDPDAIVNLSGESEVDERAQ------------YKANLETAKQWAKNDPKLV 574 A G DD A+V L+G +E E Y+ NLE AKQ AK +PKLV Sbjct: 512 ---APG---DDDAAVVTLTGAAEGAEGENMVGVPRKLAAKGYEQNLEAAKQLAKENPKLV 565 Query: 575 ASIIKSWVNNE 585 AS++ +WV+ E Sbjct: 566 ASLVTNWVSKE 576 >C6WV87.1 C6WV87_METML Flagellar M-ring protein FliF Length = 546 Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust. Identities = 313/553 (56%), Positives = 398/553 (71%), Gaps = 35/553 (6%) Query: 36 GKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDGGAIVASLQQMNVPYKYSDG 95 G ++LL+ AA +AVM WLWSQ+ +YRVLFSN++D+DGGAIVA+L+++NVPYK+SD Sbjct: 21 GGKLLLVAGIAAVVAVMVVFWLWSQQPDYRVLFSNYSDKDGGAIVAALEKLNVPYKFSDS 80 Query: 96 GTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGISQFLEQVNFQRALEGELAR 155 GTAI+VP VH RLKLAA GLPKGGN+GFEL+ENQK G+SQF+EQVNFQR LEGEL R Sbjct: 81 GTAIMVPAAQVHQVRLKLAADGLPKGGNIGFELLENQKFGVSQFVEQVNFQRGLEGELER 140 Query: 156 SVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPGRYLDPQQVSAIVHLVASSV 215 S+ S+A+V+ AR+HLA+PK SVFVRDQQKPTASV+L+L PGR LD QQVSA+VHLVASSV Sbjct: 141 SIQSIAAVEVARIHLAIPKPSVFVRDQQKPTASVLLNLRPGRTLDAQQVSAVVHLVASSV 200 Query: 216 PELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDMQQDIVKRVESIIAPIVGNG 275 P L VT+VDQNGNLLSDTTK+ LDP QLKYV+++QQ IVKRVESII+PIVG Sbjct: 201 PNLPTTNVTVVDQNGNLLSDTTKKMGAKNLDPEQLKYVEEIQQSIVKRVESIISPIVGAK 260 Query: 276 NVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEANSASNGTSGVPGALSNQPP 335 NVRAEA+A++DFS EQA+E YKPNQ D+AAVRS QS+E SA+ T+GVPGALSNQPP Sbjct: 261 NVRAEASAEIDFSVQEQAAETYKPNQQPDAAAVRSMQSNETKSANGETAGVPGALSNQPP 320 Query: 336 APATAPIVNPAVANGAANQTGAATPNGALPTPTATGNSRKDETINYEVDKTVRYTQQPMG 395 ATAPI A A+ ATP N+ K+ T NYEVDKTV Y QQPMG Sbjct: 321 PAATAPITTEANADANGQPASNATPT----------NTEKNLTTNYEVDKTVSYRQQPMG 370 Query: 396 GVRRLTVAVVVNYKRTMD-NTGKIVMRPLTEAERNQITDLVKEAMGYNKDRGDSLNVVNT 454 GV+RL VAVVVN +D TGK+ R LT AE+ QI DL +AMG+NK+RGDSL +VNT Sbjct: 371 GVKRLNVAVVVNNMPVVDKKTGKVSYRALTVAEKTQINDLAMQAMGFNKERGDSLAIVNT 430 Query: 455 QFS---TDMEPEVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRVLRPIVWKLSGREERE 511 F+ ++ P +PLW+ P +I+ K++ ++ + LL +Y +VL+P++ KL+ Sbjct: 431 PFAGEPQEVLPAIPLWENPRVIENVKDVLRFAVGVIALLIIYRKVLKPLLNKLT------ 484 Query: 512 RLAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLSGE-SEVDERAQYKANLETAKQWAKND 570 AAV G + PDA+V++S + S E+ Y +ETAKQ AK++ Sbjct: 485 -----------TPPKAAVNQG---EAPDAVVSISADGSNAAEKPAYTQKIETAKQIAKDN 530 Query: 571 PKLVASIIKSWVN 583 P++VAS++ +W N Sbjct: 531 PRMVASVVANWTN 543 >D7DQ15.1 D7DQ15_METS0 Flagellar M-ring protein FliF Length = 551 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 310/553 (56%), Positives = 398/553 (71%), Gaps = 39/553 (7%) Query: 36 GKRILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDGGAIVASLQQMNVPYKYSDG 95 G +++L++AAAA +AVM WLWSQ+ +YRVLFSN+ D+DGGAIVA L++MNVPYK+SD Sbjct: 26 GNKLILVVAAAAVVAVMVVFWLWSQQPDYRVLFSNYTDKDGGAIVAELEKMNVPYKFSDS 85 Query: 96 GTAILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGISQFLEQVNFQRALEGELAR 155 GTAILVP + VH ARLKLA+ GLPKGGN+GFE++ENQK G+SQF+EQVNFQRALEGEL R Sbjct: 86 GTAILVPASQVHQARLKLASDGLPKGGNIGFEILENQKFGVSQFVEQVNFQRALEGELER 145 Query: 156 SVGSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPGRYLDPQQVSAIVHLVASSV 215 S+ S+ +V+TAR+HLA+PKASVFVRDQQ PTASV+L+L GR LD QQV A+VHLVASSV Sbjct: 146 SIQSIGAVETARIHLAIPKASVFVRDQQSPTASVLLNLRAGRSLDAQQVGAVVHLVASSV 205 Query: 216 PELSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDMQQDIVKRVESIIAPIVGNG 275 P L VT+VDQNGNLLSDT+K+ N LDPTQLKY+ D+QQ I+KRVESII PIVG Sbjct: 206 PNLPAANVTVVDQNGNLLSDTSKKMGANNLDPTQLKYIDDIQQSIIKRVESIITPIVGAK 265 Query: 276 NVRAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEANSASNG-TSGVPGALSNQP 334 NVRAEA+A++DFS EQA+E YKPNQ D AA+RS QS+E+ +++ G +GVPGALSNQP Sbjct: 266 NVRAEASAEIDFSSLEQAAEIYKPNQKPDDAAIRSLQSNESLTSNGGAATGVPGALSNQP 325 Query: 335 PAPATAPIVNPAVANGAANQTGAATPNGALPTPTATGNSRKDETINYEVDKTVRYTQQPM 394 P ATAPI PA A A A N++K+ T N+EVDKTVRY+QQ M Sbjct: 326 PPNATAPITTPAGAAPGATAEAAPV------------NNQKNTTTNFEVDKTVRYSQQGM 373 Query: 395 GGVRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVKEAMGYNKDRGDSLNVVNT 454 GG++RL VAVVVN +D GK+ RPLT AE+ QI DL +AMG+NK+RGD+L VVN+ Sbjct: 374 GGIKRLNVAVVVNNMPVVDKKGKVTYRPLTAAEKTQINDLAMQAMGFNKERGDALTVVNS 433 Query: 455 QFSTDME---PEVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRVLRPIVWKLSGREERE 511 F+ + E PEVP+WK P I+ K+ ++++ VLL +Y R L P++ KL+ + Sbjct: 434 SFAGEPEEIIPEVPMWKNPETIEYGKDALRFIVGIVVLLLIYKRALSPMLRKLTAPSPKL 493 Query: 512 RLAKEKAEAEAAAAAAAVAAGFDPDDPDAIVNLS---GESEVDERAQYKANLETAKQWAK 568 A P D DA+VNLS G++++ A +NL AKQ AK Sbjct: 494 LNA--------------------PGDEDAVVNLSGAEGQAQLAAVAGSNSNLAAAKQLAK 533 Query: 569 NDPKLVASIIKSW 581 ++P++VAS++ +W Sbjct: 534 DNPRMVASVVANW 546