BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0064.p (334 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISZ3.1 D8ISZ3_HERSS Flagellar motor switch FliM protein 684 0.0 A6SXX7.1 A6SXX7_JANMA FliM flagellar motor switch protein 528 e-148 Q5QCQ0.1 Q5QCQ0_HERAR FliM 528 e-148 F1VUF9.1 F1VUF9_9BURK Flagellar motor switch protein FliM 521 e-146 E4QKK4.1 E4QKK4_METS6 Flagellar motor switch protein FliM 496 e-138 C6XAS9.1 C6XAS9_METSD Flagellar motor switch protein FliM 496 e-138 Q1GZU9.1 Q1GZU9_METFK Flagellar motor switch protein FliM 496 e-138 Q3SIG8.1 Q3SIG8_THIDA Flagellar motor switch protein FliM 494 e-138 C6WV94.1 C6WV94_METML Flagellar motor switch protein FliM 494 e-138 E2SUN3.1 E2SUN3_9RALS Flagellar motor switch protein FliM 493 e-137 >D8ISZ3.1 D8ISZ3_HERSS Flagellar motor switch FliM protein Length = 334 Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/334 (100%), Positives = 334/334 (100%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER Sbjct: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP Sbjct: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI Sbjct: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE Sbjct: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV Sbjct: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 Query: 301 MECSYGQSNGQYALRVEKLLSITHQETPESFQGD 334 MECSYGQSNGQYALRVEKLLSITHQETPESFQGD Sbjct: 301 MECSYGQSNGQYALRVEKLLSITHQETPESFQGD 334 >A6SXX7.1 A6SXX7_JANMA FliM flagellar motor switch protein Length = 332 Score = 528 bits (1360), Expect = e-148, Method: Compositional matrix adjust. Identities = 245/327 (74%), Positives = 287/327 (87%), Gaps = 1/327 (0%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MA++FLSQEEVDALLKGV GD+DE E++ G VR YNLATQERIVRGRMPTLEIINER Sbjct: 1 MADNFLSQEEVDALLKGVNGDQDETGKPEDSAG-VRPYNLATQERIVRGRMPTLEIINER 59 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 F+RL RIGLFNF+HR+AE+S+GPV+VSKYSEFIRNLVVPTNLNL+H+KP RG GL+V DP Sbjct: 60 FSRLLRIGLFNFLHRSAEVSIGPVRVSKYSEFIRNLVVPTNLNLIHMKPLRGTGLIVLDP 119 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 VF+LVDN+FGGDGRFHTR+EGR+FT TEQRII R+L I FETYAKSWEP+YP+EFE+I Sbjct: 120 NLVFLLVDNLFGGDGRFHTRVEGRDFTQTEQRIIQRILGIIFETYAKSWEPVYPVEFEYI 179 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEVVV+TTFT+ELGPVSG++H CTPY+MIEP+RD LTSSMQGE LE Sbjct: 180 RSEMNTQFANIATPNEVVVATTFTIELGPVSGDMHFCTPYAMIEPIRDLLTSSMQGETLE 239 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 +DKRWIRLM QQIQTAEVE++ N G+A+V D+L+MQ GD+IP+ T+ A+VD VPV Sbjct: 240 MDKRWIRLMTQQIQTAEVEILANMGSAKVTLGDILNMQKGDIIPIAVPDTITAEVDSVPV 299 Query: 301 MECSYGQSNGQYALRVEKLLSITHQET 327 MECSYG+ NGQYALRVEKL+ + T Sbjct: 300 MECSYGKLNGQYALRVEKLIYSANDTT 326 >Q5QCQ0.1 Q5QCQ0_HERAR FliM Length = 332 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 245/327 (74%), Positives = 287/327 (87%), Gaps = 1/327 (0%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MA++FLSQEEVDALLKGV GD+DE E++ G VR YNLATQERIVRGRMPTLEIINER Sbjct: 1 MADNFLSQEEVDALLKGVNGDQDEAGKPEDSTG-VRPYNLATQERIVRGRMPTLEIINER 59 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 F+RL RIGLFNF+HR+AE+S+GPV+VSKYSEFIRNLVVPTNLNL+H+KP RGIGL+V DP Sbjct: 60 FSRLLRIGLFNFLHRSAEVSIGPVRVSKYSEFIRNLVVPTNLNLIHMKPLRGIGLIVLDP 119 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 VF+LVDN+FGGDGRFHTR+EGR+FT TEQRII R+L I FETYAKSWEP+YP+EFE+I Sbjct: 120 NLVFLLVDNLFGGDGRFHTRVEGRDFTQTEQRIIQRILGIIFETYAKSWEPVYPVEFEYI 179 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEVVV+TTFT+ELGPVSG++H C PYSMIEP+RD LTSSMQGE LE Sbjct: 180 RSEMNTQFANIATPNEVVVATTFTIELGPVSGDLHFCVPYSMIEPIRDLLTSSMQGETLE 239 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 +DKRWIRLM QQIQTAEVE++ N G+A+V D+L+M++GD+I + V A+VDGVPV Sbjct: 240 MDKRWIRLMTQQIQTAEVEILANMGSAKVTLGDILNMKIGDIISIAVPEQVTAEVDGVPV 299 Query: 301 MECSYGQSNGQYALRVEKLLSITHQET 327 MECSYG+ NGQYALRVEKL+ + T Sbjct: 300 MECSYGKLNGQYALRVEKLIYSANDTT 326 >F1VUF9.1 F1VUF9_9BURK Flagellar motor switch protein FliM Length = 333 Score = 521 bits (1343), Expect = e-146, Method: Compositional matrix adjust. Identities = 247/334 (73%), Positives = 287/334 (85%), Gaps = 4/334 (1%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MA++FLSQEEVDALLKGV GD+++ E+ G VR YNLATQERIVRGRMPTLEIINER Sbjct: 1 MADNFLSQEEVDALLKGVNGDQEDAHAPEDQSG-VRPYNLATQERIVRGRMPTLEIINER 59 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 FARL RIGLFNF+ R+AE+S+GPV+VSKYSEFIRNLVVPTNLNLVH+KP RG L+VFDP Sbjct: 60 FARLLRIGLFNFLRRSAEVSIGPVRVSKYSEFIRNLVVPTNLNLVHMKPLRGTVLMVFDP 119 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 VF++VDN+FGGDGRFHTR+EGR+FT TEQRII R+L I FE YAKSWEP+YP+EFE+I Sbjct: 120 NLVFLIVDNLFGGDGRFHTRVEGRDFTQTEQRIIQRILAIVFENYAKSWEPVYPVEFEYI 179 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEVV+ TTFT+ELGPVSGE+H C PYS IEP+RD LTSS+QGE LE Sbjct: 180 RSEMNTQFANIATPNEVVICTTFTIELGPVSGEMHFCIPYSTIEPIRDILTSSLQGETLE 239 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 VDKRWIRLM QQIQTAEVE+I +FG AR NF +L+M+VGD+IPL V A+VDGVPV Sbjct: 240 VDKRWIRLMTQQIQTAEVEIIADFGVARSNFGAILNMKVGDIIPLAVPDVVLAKVDGVPV 299 Query: 301 MECSYGQSNGQYALRVEKLLSITHQETPESFQGD 334 MEC+YG+ NGQYALRVEKLL+ Q + ++ GD Sbjct: 300 MECTYGKFNGQYALRVEKLLA---QSSTDALHGD 330 >E4QKK4.1 E4QKK4_METS6 Flagellar motor switch protein FliM Length = 334 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 236/326 (72%), Positives = 269/326 (82%), Gaps = 1/326 (0%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MA+ FLSQ+EVDALLKGV D+D+ V E P VR YNLATQERIVRGRMPTLEIINER Sbjct: 1 MADSFLSQDEVDALLKGVGLDQDDTPV-EHDPHGVREYNLATQERIVRGRMPTLEIINER 59 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 FARL RIGLFNF+ R+ E+SVGPV++SKYSEF+RNLVVPTNLNLVH+ P RG GL+VFDP Sbjct: 60 FARLLRIGLFNFMRRSVEVSVGPVRISKYSEFVRNLVVPTNLNLVHMNPLRGTGLMVFDP 119 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 VF +VDNMFGGDGRFHTRIEGR+FT TEQRII RVL I E Y KSWEP+Y ++FE++ Sbjct: 120 SLVFSIVDNMFGGDGRFHTRIEGRDFTQTEQRIIQRVLAIVIENYEKSWEPVYQVKFEYL 179 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEV+V+TTF++ELGP GEIH C PYSMIEPVRD LTSS+QGE L Sbjct: 180 RSEMNTQFANIATPNEVIVATTFSIELGPAGGEIHFCFPYSMIEPVRDLLTSSLQGEVLG 239 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 VDKRW+RLM QQIQ AEVEL+ N AR+ D+L+M+VGDVIPL + T+EA VD VPV Sbjct: 240 VDKRWVRLMTQQIQAAEVELVANLAKARMQLGDVLNMKVGDVIPLNISETIEAHVDNVPV 299 Query: 301 MECSYGQSNGQYALRVEKLLSITHQE 326 MEC YG NGQY+LRVEKLL E Sbjct: 300 MECKYGVFNGQYSLRVEKLLRANASE 325 >C6XAS9.1 C6XAS9_METSD Flagellar motor switch protein FliM Length = 334 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 236/326 (72%), Positives = 269/326 (82%), Gaps = 1/326 (0%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MA+ FLSQ+EVDALLKGV D+D+ V E P VR YNLATQERIVRGRMPTLEIINER Sbjct: 1 MADSFLSQDEVDALLKGVGLDQDDTPV-EHDPHGVREYNLATQERIVRGRMPTLEIINER 59 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 FARL RIGLFNF+ R+ E+SVGPV++SKYSEF+RNLVVPTNLNLVH+ P RG GL+VFDP Sbjct: 60 FARLLRIGLFNFMRRSVEVSVGPVRISKYSEFVRNLVVPTNLNLVHMNPLRGTGLMVFDP 119 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 VF +VDNMFGGDGRFHTRIEGR+FT TEQRII RVL I E Y KSWEP+Y ++FE++ Sbjct: 120 SLVFSIVDNMFGGDGRFHTRIEGRDFTQTEQRIIQRVLAIVIENYEKSWEPVYQVKFEYL 179 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEV+V+TTF++ELGP GEIH C PYSMIEPVRD LTSS+QGE L Sbjct: 180 RSEMNTQFANIATPNEVIVATTFSIELGPAGGEIHFCFPYSMIEPVRDLLTSSLQGEVLG 239 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 VDKRW+RLM QQIQ AEVEL+ N AR+ D+L+M+VGDVIPL + T+EA VD VPV Sbjct: 240 VDKRWVRLMTQQIQAAEVELVANLAKARMQLGDVLNMKVGDVIPLNISETIEAHVDNVPV 299 Query: 301 MECSYGQSNGQYALRVEKLLSITHQE 326 MEC YG NGQY+LRVEKLL E Sbjct: 300 MECKYGVFNGQYSLRVEKLLRANASE 325 >Q1GZU9.1 Q1GZU9_METFK Flagellar motor switch protein FliM Length = 335 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 238/326 (73%), Positives = 270/326 (82%), Gaps = 1/326 (0%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MA++FLSQEEVDALL+GVT +E E+ P VR YNLATQERIVRGRMPTLEIINER Sbjct: 1 MADNFLSQEEVDALLRGVT-NEQEDDTPALDPAGVREYNLATQERIVRGRMPTLEIINER 59 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 FARL RIGLFNF+ RT E+SVGPVK+SKYSEFIRNLVVPTNLNLV +KP RG L+VFDP Sbjct: 60 FARLLRIGLFNFLRRTTEVSVGPVKISKYSEFIRNLVVPTNLNLVQMKPLRGTALMVFDP 119 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 VF++VDN+FGGDGRFHTR+EGR+FT TEQRII RVL I FETYAKSWEP+Y +EFE+I Sbjct: 120 TLVFLIVDNLFGGDGRFHTRVEGRDFTQTEQRIIQRVLAIVFETYAKSWEPVYKLEFEYI 179 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEVVVSTTF +ELG SGEIH C PYSMIEP+RD LTS +QGEAL Sbjct: 180 RSEMNTQFANIATPNEVVVSTTFNIELGSASGEIHFCFPYSMIEPIRDLLTSPLQGEALG 239 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 VDKRW+RLM QQIQ+AEV LI + A + D+L+M+VGDVIPL + +EA+VD VPV Sbjct: 240 VDKRWVRLMTQQIQSAEVMLIADLAKAEMTLGDILNMKVGDVIPLSISEEIEAKVDNVPV 299 Query: 301 MECSYGQSNGQYALRVEKLLSITHQE 326 M+C YG NGQYALRVEKLL E Sbjct: 300 MQCKYGVFNGQYALRVEKLLRSNSSE 325 >Q3SIG8.1 Q3SIG8_THIDA Flagellar motor switch protein FliM Length = 334 Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust. Identities = 232/326 (71%), Positives = 273/326 (83%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MA++FLSQ+EVDALLKGV+G+ D+ G R YNLATQERIVRGRMPTLEIINER Sbjct: 1 MADNFLSQDEVDALLKGVSGEVDDAPQEAVDTGGPRPYNLATQERIVRGRMPTLEIINER 60 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 FARL RIGL+NF+ R EISVGPV+VSKYSEFIRNLVVPTNLNLV KP RG L++F+P Sbjct: 61 FARLLRIGLYNFLRRGVEISVGPVRVSKYSEFIRNLVVPTNLNLVQFKPLRGTALMIFNP 120 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 VF++VDN+FGGDGRFHTR+EGR+FT TE RII R+L I FE Y KSWEP+YPIEFEFI Sbjct: 121 DLVFLMVDNLFGGDGRFHTRVEGRDFTQTEHRIIQRILNIVFEAYGKSWEPVYPIEFEFI 180 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEVVV+ TF +ELG +SGE+H C PYSMIEP++D LTSS+Q E LE Sbjct: 181 RSEMNTQFANIATPNEVVVAVTFAIELGQISGEMHFCMPYSMIEPIKDLLTSSLQAENLE 240 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 VDKRWIRLM+QQIQ AEVE++ + GTA V+ D+++++VGDVIPL T+EA+VDGVPV Sbjct: 241 VDKRWIRLMRQQIQLAEVEIVADLGTAEVSLRDIVNLKVGDVIPLDIPPTIEAKVDGVPV 300 Query: 301 MECSYGQSNGQYALRVEKLLSITHQE 326 MEC+YG+ NGQY LRVEKLLS + E Sbjct: 301 MECAYGKFNGQYTLRVEKLLSTSAVE 326 >C6WV94.1 C6WV94_METML Flagellar motor switch protein FliM Length = 334 Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust. Identities = 230/326 (70%), Positives = 270/326 (82%), Gaps = 1/326 (0%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 MA+ FLSQ+EVDALLKGV GD D+++ EA G VR YNLATQERIVRGRMPTLEIINER Sbjct: 1 MADKFLSQDEVDALLKGVGGDHDDDQAASEAEG-VRDYNLATQERIVRGRMPTLEIINER 59 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 FARL RI LFNF+ RT E+SVGPV+++KYS+FIRNLVVPTNLNLV +KP RG L+VFDP Sbjct: 60 FARLVRIELFNFLRRTVEVSVGPVRITKYSDFIRNLVVPTNLNLVQMKPLRGTALMVFDP 119 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 VF++VDNMFGGDGRFHTR+EGR+FT TEQRII R+L I FETYAKSWEP+YPIEFE++ Sbjct: 120 TLVFLVVDNMFGGDGRFHTRVEGRDFTQTEQRIIQRILAIVFETYAKSWEPVYPIEFEYL 179 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 RSEMNTQFANIATPNEVVV TTF VELGP SGEIH C PYSM+EP+RD LTS +QGE L Sbjct: 180 RSEMNTQFANIATPNEVVVVTTFNVELGPASGEIHFCMPYSMVEPIRDLLTSPLQGEVLG 239 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 DKRW++LM QQ+Q AE+E++ + T ++ +L+M+VGDVIP+ + +EA+VDGVPV Sbjct: 240 ADKRWVKLMTQQVQAAEIEIVADLATTEMHLGKVLNMKVGDVIPISMDDAIEAKVDGVPV 299 Query: 301 MECSYGQSNGQYALRVEKLLSITHQE 326 M C YG NGQYALRVEKLL E Sbjct: 300 MLCKYGLFNGQYALRVEKLLRSNSTE 325 >E2SUN3.1 E2SUN3_9RALS Flagellar motor switch protein FliM Length = 336 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 221/334 (66%), Positives = 279/334 (83%) Query: 1 MAEHFLSQEEVDALLKGVTGDEDEEKVVEEAPGTVRTYNLATQERIVRGRMPTLEIINER 60 + E FLSQEE+DALLKGV+ D D++ V P +R+YNL +QERIVRGRMPTLEIINER Sbjct: 2 LKEEFLSQEEIDALLKGVSDDADDDPVEAADPSGIRSYNLGSQERIVRGRMPTLEIINER 61 Query: 61 FARLFRIGLFNFIHRTAEISVGPVKVSKYSEFIRNLVVPTNLNLVHIKPFRGIGLVVFDP 120 FAR +RIGLFNF+ R AEISVGPVKV KYSEFIRNLVVPT+LNLVH+KP RG L VFDP Sbjct: 62 FARNWRIGLFNFMRRNAEISVGPVKVQKYSEFIRNLVVPTSLNLVHVKPLRGTALFVFDP 121 Query: 121 QFVFMLVDNMFGGDGRFHTRIEGREFTPTEQRIIMRVLEITFETYAKSWEPIYPIEFEFI 180 +F++VDN+FGGDGRFH R+EGR+FT EQRII R+L + FE YAK+W+P+YPI+FEF+ Sbjct: 122 NLIFLVVDNLFGGDGRFHMRVEGRDFTDVEQRIIQRMLHLVFEHYAKAWQPVYPIDFEFL 181 Query: 181 RSEMNTQFANIATPNEVVVSTTFTVELGPVSGEIHICTPYSMIEPVRDRLTSSMQGEALE 240 R EM+T+FAN+ATPNEVV++T+F++ELG G++HIC PY+MIEP+RDRLTS++QGEALE Sbjct: 182 RMEMHTEFANVATPNEVVITTSFSIELGSNGGDVHICMPYTMIEPIRDRLTSAIQGEALE 241 Query: 241 VDKRWIRLMKQQIQTAEVELIVNFGTARVNFTDLLHMQVGDVIPLQTNTTVEAQVDGVPV 300 VDKRW+RL+ QQ+QTAEVELI + TA+V +D+L+M+VGDVIPL+ + V A+VDGVPV Sbjct: 242 VDKRWLRLLSQQVQTAEVELIADLATAKVQVSDILNMKVGDVIPLELDDCVTAKVDGVPV 301 Query: 301 MECSYGQSNGQYALRVEKLLSITHQETPESFQGD 334 MEC+YG NGQYALRV ++L+++ E+ D Sbjct: 302 MECNYGTFNGQYALRVNRMLNMSGSESATESDDD 335