BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0061.p (265 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISZ0.1 D8ISZ0_HERSS Flagellar biosynthetic protein FliP protein 484 e-135 Q1GZV2.1 Q1GZV2_METFK Flagellar biosynthetic protein FliP 362 2e-98 D7DQ25.1 D7DQ25_METS0 Flagellar biosynthetic protein FliP 357 8e-97 A6SXX4.1 A6SXX4_JANMA Flip component of flagellar biosynthesis p... 355 3e-96 Q5QCQ6.1 Q5QCQ6_HERAR FliP 353 2e-95 F1VUF6.1 F1VUF6_9BURK Flagellar biosynthesis protein fliP 352 2e-95 A4G6A1.1 A4G6A1_HERAR Flagellar biosynthetic protein FliP 352 3e-95 Q2T2N8.1 Q2T2N8_BURTA Flagellar biosynthetic protein 350 2e-94 Q3V7T3.1 Q3V7T3_BURPS Flagellar biosynthetic protein 348 5e-94 A3NPP6.1 A3NPP6_BURP0 Flagellar biosynthetic protein FliP 347 1e-93 >D8ISZ0.1 D8ISZ0_HERSS Flagellar biosynthetic protein FliP protein Length = 244 Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust. Identities = 243/244 (99%), Positives = 244/244 (100%) Query: 22 LRNRYCWLALLCLPLAASAQQGIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLM 81 +RNRYCWLALLCLPLAASAQQGIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLM Sbjct: 1 MRNRYCWLALLCLPLAASAQQGIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLM 60 Query: 82 MTCFTRIVIVLSLLRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENK 141 MTCFTRIVIVLSLLRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENK Sbjct: 61 MTCFTRIVIVLSLLRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENK 120 Query: 142 IQMMEALDKGAQPLKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELK 201 IQMMEALDKGAQPLKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELK Sbjct: 121 IQMMEALDKGAQPLKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELK 180 Query: 202 TAFQIGFAIFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLA 261 TAFQIGFAIFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLA Sbjct: 181 TAFQIGFAIFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLA 240 Query: 262 QSFY 265 QSFY Sbjct: 241 QSFY 244 >Q1GZV2.1 Q1GZV2_METFK Flagellar biosynthetic protein FliP Length = 250 Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 181/228 (79%), Positives = 206/228 (90%) Query: 38 ASAQQGIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLMMTCFTRIVIVLSLLRQ 97 A+ G+ +NS PAPGGG NYSL IQT++LLTSL+FLPAALLMMT FTRI+IVLSLLRQ Sbjct: 23 AAEPGGLGLINSQPAPGGGQNYSLSIQTLILLTSLTFLPAALLMMTGFTRIIIVLSLLRQ 82 Query: 98 ALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENKIQMMEALDKGAQPLKE 157 ALGTQS+PP QVLVGL+LFLTFFVM PVF+RIYT+AYQPF E +I M EA+ +G+ PLKE Sbjct: 83 ALGTQSSPPNQVLVGLALFLTFFVMGPVFERIYTEAYQPFDEERITMQEAMVRGSIPLKE 142 Query: 158 FMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELKTAFQIGFAIFLPFLII 217 FMLKQTRESDLAL+ K+SR A+ PE+VPLR+LVPAFVTSELKTAFQIGFAIF+PFLII Sbjct: 143 FMLKQTRESDLALFFKMSRADAVATPEEVPLRVLVPAFVTSELKTAFQIGFAIFIPFLII 202 Query: 218 DMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLAQSFY 265 DMVVASILMSMGMMM+SPA+V+LPFKLMLFVLVDGWQLL+GSLAQSFY Sbjct: 203 DMVVASILMSMGMMMVSPAIVALPFKLMLFVLVDGWQLLLGSLAQSFY 250 >D7DQ25.1 D7DQ25_METS0 Flagellar biosynthetic protein FliP Length = 258 Score = 357 bits (916), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 173/236 (73%), Positives = 208/236 (88%) Query: 30 ALLCLPLAASAQQGIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLMMTCFTRIV 89 ++L LP A A+ G+P +N++PA GGG NY+L +QT++LLTSL+FLPAALLMMT FTRI+ Sbjct: 23 SMLMLPGTALAENGMPLVNALPAAGGGQNYTLSLQTLILLTSLTFLPAALLMMTGFTRII 82 Query: 90 IVLSLLRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENKIQMMEALD 149 IVLSLLRQALGTQS PP QV+VGL+LFLTFFVMSPV D+IY DAYQP +ENKI M EA+D Sbjct: 83 IVLSLLRQALGTQSAPPNQVMVGLALFLTFFVMSPVIDKIYVDAYQPLSENKITMQEAMD 142 Query: 150 KGAQPLKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELKTAFQIGFA 209 KGA PLK FM+KQTRE DLAL+V +++ ++ P+ VPL +LVPAF+TSELKTAFQIGFA Sbjct: 143 KGAAPLKAFMMKQTREGDLALFVNMAKIEKIETPDQVPLLVLVPAFMTSELKTAFQIGFA 202 Query: 210 IFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLAQSFY 265 IF+PFLIIDMVVAS+LM+MGMMM+SP++VSLPFKLMLFVLVDGWQLL+GSL QSFY Sbjct: 203 IFIPFLIIDMVVASVLMAMGMMMVSPSIVSLPFKLMLFVLVDGWQLLLGSLVQSFY 258 >A6SXX4.1 A6SXX4_JANMA Flip component of flagellar biosynthesis pathway Length = 252 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 189/231 (81%), Positives = 209/231 (90%), Gaps = 1/231 (0%) Query: 36 LAASAQQ-GIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLMMTCFTRIVIVLSL 94 +AA AQQ G+PA S PAPGGG YSL +QT+LLLT LSFLPA LLMMT FTRI+IVLSL Sbjct: 22 VAAMAQQAGLPAFTSSPAPGGGQTYSLSLQTLLLLTGLSFLPAVLLMMTSFTRIIIVLSL 81 Query: 95 LRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENKIQMMEALDKGAQP 154 LRQALGTQS+PP QV++GLSLFLT FVMSPV D+IY DAYQPF++NKIQM EALDK P Sbjct: 82 LRQALGTQSSPPNQVIIGLSLFLTLFVMSPVLDKIYVDAYQPFSQNKIQMQEALDKAVAP 141 Query: 155 LKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELKTAFQIGFAIFLPF 214 LK FM+KQTRESDLALYVKLS+GP LQGPED+PLR+LVPAFVTSELKTAFQI FAIF+PF Sbjct: 142 LKTFMIKQTRESDLALYVKLSKGPELQGPEDIPLRILVPAFVTSELKTAFQISFAIFIPF 201 Query: 215 LIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLAQSFY 265 LIIDMVVAS+LMSMGMMM+SPA+V+LPFKLMLFVLVDGWQLLIGSLAQSFY Sbjct: 202 LIIDMVVASVLMSMGMMMVSPAIVALPFKLMLFVLVDGWQLLIGSLAQSFY 252 >Q5QCQ6.1 Q5QCQ6_HERAR FliP Length = 271 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 187/231 (80%), Positives = 208/231 (90%), Gaps = 1/231 (0%) Query: 36 LAASAQQ-GIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLMMTCFTRIVIVLSL 94 +AA AQQ G+PAL S P PGGG YSL +QT+LLLT LSFLPA LLMMT FTRI+IVLSL Sbjct: 41 MAAMAQQAGLPALTSTPTPGGGQTYSLSLQTLLLLTGLSFLPAVLLMMTSFTRIIIVLSL 100 Query: 95 LRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENKIQMMEALDKGAQP 154 LRQALGTQS+PP QV++GLSLFLT FVMSPV D+IY DAYQPF+ NKIQM EALDK P Sbjct: 101 LRQALGTQSSPPNQVIIGLSLFLTLFVMSPVLDKIYVDAYQPFSANKIQMGEALDKAVAP 160 Query: 155 LKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELKTAFQIGFAIFLPF 214 LK FM+KQTRESDLALYVK+S+GP LQGPED+PLR+LVPAF+TSELKTAFQI FAIF+PF Sbjct: 161 LKTFMIKQTRESDLALYVKMSKGPELQGPEDIPLRILVPAFITSELKTAFQISFAIFIPF 220 Query: 215 LIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLAQSFY 265 LIIDMVVAS+LMSMGMMM+SPA+V+LPFKLMLFVLVDGWQLLIGSLAQSFY Sbjct: 221 LIIDMVVASVLMSMGMMMVSPAIVALPFKLMLFVLVDGWQLLIGSLAQSFY 271 >F1VUF6.1 F1VUF6_9BURK Flagellar biosynthesis protein fliP Length = 251 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 187/242 (77%), Positives = 215/242 (88%), Gaps = 1/242 (0%) Query: 25 RYCWLALLCLPLAASAQQ-GIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLMMT 83 R+ +AL+ LPLAA AQQ G+PAL S P GGG NY+L +QT+LLLT+LSFLPAALLMMT Sbjct: 10 RWSAVALVVLPLAAYAQQAGLPALTSTPTAGGGQNYTLSLQTLLLLTALSFLPAALLMMT 69 Query: 84 CFTRIVIVLSLLRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENKIQ 143 FTRI+IVLSLLRQALGTQS PP QV+VGL+LFLT FVM PVFD+IY DAY P ENKI Sbjct: 70 SFTRIIIVLSLLRQALGTQSAPPNQVMVGLALFLTLFVMGPVFDKIYADAYLPLQENKIN 129 Query: 144 MMEALDKGAQPLKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELKTA 203 M +A+++GA PLK FM+KQTR++DLALYVK+S PALQGP+DVPLR+LVPAF+TSELKTA Sbjct: 130 MTQAMERGAAPLKAFMMKQTRQADLALYVKMSNSPALQGPDDVPLRILVPAFITSELKTA 189 Query: 204 FQIGFAIFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLAQS 263 FQI FAIF+PFLIIDMVVAS+LMSMGMMM+SP++VSLPFKLMLFVLVDGWQLLIGSLAQS Sbjct: 190 FQISFAIFIPFLIIDMVVASVLMSMGMMMVSPSIVSLPFKLMLFVLVDGWQLLIGSLAQS 249 Query: 264 FY 265 FY Sbjct: 250 FY 251 >A4G6A1.1 A4G6A1_HERAR Flagellar biosynthetic protein FliP Length = 252 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 187/231 (80%), Positives = 208/231 (90%), Gaps = 1/231 (0%) Query: 36 LAASAQQ-GIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFLPAALLMMTCFTRIVIVLSL 94 +AA AQQ G+PAL S P PGGG YSL +QT+LLLT LSFLPA LLMMT FTRI+IVLSL Sbjct: 22 MAAMAQQAGLPALTSTPTPGGGQTYSLSLQTLLLLTGLSFLPAVLLMMTSFTRIIIVLSL 81 Query: 95 LRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQPFAENKIQMMEALDKGAQP 154 LRQALGTQS+PP QV++GLSLFLT FVMSPV D+IY DAYQPF+ NKIQM EALDK P Sbjct: 82 LRQALGTQSSPPNQVIIGLSLFLTLFVMSPVLDKIYVDAYQPFSANKIQMGEALDKAVAP 141 Query: 155 LKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAFVTSELKTAFQIGFAIFLPF 214 LK FM+KQTRESDLALYVK+S+GP LQGPED+PLR+LVPAF+TSELKTAFQI FAIF+PF Sbjct: 142 LKTFMIKQTRESDLALYVKMSKGPELQGPEDIPLRILVPAFITSELKTAFQISFAIFIPF 201 Query: 215 LIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQLLIGSLAQSFY 265 LIIDMVVAS+LMSMGMMM+SPA+V+LPFKLMLFVLVDGWQLLIGSLAQSFY Sbjct: 202 LIIDMVVASVLMSMGMMMVSPAIVALPFKLMLFVLVDGWQLLIGSLAQSFY 252 >Q2T2N8.1 Q2T2N8_BURTA Flagellar biosynthetic protein Length = 276 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 180/257 (70%), Positives = 204/257 (79%), Gaps = 4/257 (1%) Query: 12 STAARKAAALLRNRYCWLALLCLPLAASAQQ----GIPALNSMPAPGGGTNYSLPIQTML 67 S + A LR WL + + LA + G+PA NS P P GGT YSL +QTML Sbjct: 19 SDSRSMKTAFLRGAARWLPAILIGLAPALACAQAAGLPAFNSAPGPNGGTTYSLSVQTML 78 Query: 68 LLTSLSFLPAALLMMTCFTRIVIVLSLLRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFD 127 LLT LSFLPA LLMMT FTRI+IVLSLLRQA+GT STPP QVLVGL+LFLT FVMSPV D Sbjct: 79 LLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLD 138 Query: 128 RIYTDAYQPFAENKIQMMEALDKGAQPLKEFMLKQTRESDLALYVKLSRGPALQGPEDVP 187 + YTDAY+PF+E +QM +A+ +G P K FMLKQTRE+DLAL+ K+S+ +QGPEDVP Sbjct: 139 KAYTDAYKPFSEGTLQMDQAVQRGTAPFKTFMLKQTRETDLALFAKISKAAPMQGPEDVP 198 Query: 188 LRLLVPAFVTSELKTAFQIGFAIFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLF 247 L LLVPAFVTSELKT FQIGF IF+PFLIIDMVVAS+LMSMGMMM+SPA VSLPFKLMLF Sbjct: 199 LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPATVSLPFKLMLF 258 Query: 248 VLVDGWQLLIGSLAQSF 264 VLVDGWQLLIGSLAQSF Sbjct: 259 VLVDGWQLLIGSLAQSF 275 >Q3V7T3.1 Q3V7T3_BURPS Flagellar biosynthetic protein Length = 253 Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 179/249 (71%), Positives = 202/249 (81%), Gaps = 4/249 (1%) Query: 20 ALLRNRYCWLALLCLPLAASAQQ----GIPALNSMPAPGGGTNYSLPIQTMLLLTSLSFL 75 A LR WL + + LA + G+PA NS P P GGT YSL +QTMLLLT LSFL Sbjct: 4 ACLRGAARWLPAILIGLAPALACAQAAGLPAFNSAPGPNGGTTYSLSVQTMLLLTMLSFL 63 Query: 76 PAALLMMTCFTRIVIVLSLLRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFDRIYTDAYQ 135 PA LLMMT FTRI+IVLSLLRQA+GT STPP+QVLVGL+LFLT FVMSPV DR Y DAY+ Sbjct: 64 PAMLLMMTSFTRIIIVLSLLRQAIGTASTPPSQVLVGLALFLTLFVMSPVLDRAYNDAYK 123 Query: 136 PFAENKIQMMEALDKGAQPLKEFMLKQTRESDLALYVKLSRGPALQGPEDVPLRLLVPAF 195 PF+E +QM +A+ +G P K FMLKQTRE+DLAL+ K+S+ +QGPEDVPL LLVPAF Sbjct: 124 PFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLALFAKISKAAPMQGPEDVPLSLLVPAF 183 Query: 196 VTSELKTAFQIGFAIFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLFVLVDGWQL 255 VTSELKT FQIGF IF+PFLIIDMVVAS+LMSMGMMM+SPA VSLPFKLMLFVLVDGWQL Sbjct: 184 VTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPATVSLPFKLMLFVLVDGWQL 243 Query: 256 LIGSLAQSF 264 LIGSLAQSF Sbjct: 244 LIGSLAQSF 252 >A3NPP6.1 A3NPP6_BURP0 Flagellar biosynthetic protein FliP Length = 276 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 180/257 (70%), Positives = 203/257 (78%), Gaps = 4/257 (1%) Query: 12 STAARKAAALLRNRYCWLALLCLPLAASAQQ----GIPALNSMPAPGGGTNYSLPIQTML 67 S + A LR WL + + LA + G+PA NS P P GGT YSL +QTML Sbjct: 19 SDSRSMKTACLRGAARWLPAILIGLAPALACAQAAGLPAFNSAPGPNGGTTYSLSVQTML 78 Query: 68 LLTSLSFLPAALLMMTCFTRIVIVLSLLRQALGTQSTPPTQVLVGLSLFLTFFVMSPVFD 127 LLT LSFLPA LLMMT FTRI+IVLSLLRQA+GT STPP QVLVGL+LFLT FVMSPV D Sbjct: 79 LLTMLSFLPAMLLMMTSFTRIIIVLSLLRQAIGTASTPPNQVLVGLALFLTLFVMSPVLD 138 Query: 128 RIYTDAYQPFAENKIQMMEALDKGAQPLKEFMLKQTRESDLALYVKLSRGPALQGPEDVP 187 R Y DAY+PF+E +QM +A+ +G P K FMLKQTRE+DLAL+ K+S+ +QGPEDVP Sbjct: 139 RAYNDAYKPFSEGTLQMDQAVQRGTAPFKAFMLKQTRETDLALFAKISKAAPMQGPEDVP 198 Query: 188 LRLLVPAFVTSELKTAFQIGFAIFLPFLIIDMVVASILMSMGMMMMSPALVSLPFKLMLF 247 L LLVPAFVTSELKT FQIGF IF+PFLIIDMVVAS+LMSMGMMM+SPA VSLPFKLMLF Sbjct: 199 LSLLVPAFVTSELKTGFQIGFTIFIPFLIIDMVVASVLMSMGMMMVSPATVSLPFKLMLF 258 Query: 248 VLVDGWQLLIGSLAQSF 264 VLVDGWQLLIGSLAQSF Sbjct: 259 VLVDGWQLLIGSLAQSF 275