BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0011.p (198 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IR30.1 D8IR30_HERSS Recombination protein recR 404 e-111 A4G3Z0.2 RECR_HERAR Recombination protein recR 347 6e-94 A6T0H1.1 RECR_JANMA Recombination protein recR 345 2e-93 F1W0G8.1 F1W0G8_9BURK Recombination protein RecR 334 3e-90 B2JG60.1 RECR_BURP8 Recombination protein recR 310 9e-83 C5AFH8.1 C5AFH8_BURGB Recombination protein recR 310 9e-83 B9B817.1 B9B817_9BURK Recombination protein recR 310 1e-82 A9AGY1.1 RECR_BURM1 Recombination protein recR 310 1e-82 B1FYT9.1 B1FYT9_9BURK Recombination protein recR 310 1e-82 Q13Z78.1 RECR_BURXL Recombination protein recR 309 1e-82 >D8IR30.1 D8IR30_HERSS Recombination protein recR Length = 198 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 197/198 (99%), Positives = 198/198 (100%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +KTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC Sbjct: 1 MKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR Sbjct: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL Sbjct: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRTT 198 EYVDAGTIARAMLDRRTT Sbjct: 181 EYVDAGTIARAMLDRRTT 198 >A4G3Z0.2 RECR_HERAR Recombination protein recR Length = 198 Score = 347 bits (890), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 160/198 (80%), Positives = 184/198 (92%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +K+PSSL LT++LRRLPG+GPK+AQRMAYHL+QHDRD AA L ++L++A++ ++HCA+C Sbjct: 1 MKSPSSLAFLTEALRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVERVQHCAMC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE VCETC D++R+ LCVVE+P DQ+MIEQTLTFKGLYFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTESAVCETCLDAERNAALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 DIHLEKLI+RATDG+V EVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL Sbjct: 121 DIHLEKLISRATDGIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRTT 198 EYVDAGTIARAMLDRRTT Sbjct: 181 EYVDAGTIARAMLDRRTT 198 >A6T0H1.1 RECR_JANMA Recombination protein recR Length = 198 Score = 345 bits (885), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 161/198 (81%), Positives = 184/198 (92%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +KTPSSL LT++LRRLPG+GPK+AQRMAYHL+QHDRD AA L ++L++A++ ++HCA+C Sbjct: 1 MKTPSSLDFLTEALRRLPGVGPKSAQRMAYHLMQHDRDGAAMLGRALSQAVEKVQHCAMC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE VCETC D++R+ LCVVE+P DQ+MIEQTLTFKGLYFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTEHEVCETCLDAERNPALLCVVETPGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 DIHLEKLI+RATDG+V EVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL Sbjct: 121 DIHLEKLISRATDGIVQEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRTT 198 EYVDAGTIARAMLDRRTT Sbjct: 181 EYVDAGTIARAMLDRRTT 198 >F1W0G8.1 F1W0G8_9BURK Recombination protein RecR Length = 198 Score = 334 bits (857), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 155/198 (78%), Positives = 180/198 (90%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +KTPSSL LT++LRRLPG+GPK+AQR+AYHL+QHDRD A L ++L +A+D ++HC+ C Sbjct: 1 MKTPSSLEFLTETLRRLPGVGPKSAQRIAYHLMQHDRDGAEQLGRALLQAVDRVQHCSRC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE +VCETC D +RD T LCVVE+P DQ+MIEQTLT+KG YFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTEHLVCETCLDPERDATLLCVVETPGDQLMIEQTLTYKGFYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 DIHL+KLI RA+DG+V+EVVLATNFTNEGEATAHYISET+KARGL VSRLARGVPVGGEL Sbjct: 121 DIHLDKLILRASDGIVAEVVLATNFTNEGEATAHYISETMKARGLSVSRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRTT 198 EYVDAGTIARAMLDRRTT Sbjct: 181 EYVDAGTIARAMLDRRTT 198 >B2JG60.1 RECR_BURP8 Recombination protein recR Length = 198 Score = 310 bits (793), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 139/197 (70%), Positives = 172/197 (87%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +K PS+L+ L ++LR LPG+GPK+AQRMAYHL+QHDR+ A L +SL A + ++HC C Sbjct: 1 MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAEKLGRSLLFATEHLQHCEKC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE +CE C D++RD T LCVVE+P+DQ+M+EQT+T++GLYFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTEAQICEVCSDTERDPTLLCVVETPADQIMLEQTMTWRGLYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 +IH ++L+ RATDGVV EVVLATNFTNEGEATAHY+ +TLK+RGL V+RLARGVPVGGEL Sbjct: 121 EIHFDRLVKRATDGVVKEVVLATNFTNEGEATAHYLGQTLKSRGLSVTRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRT 197 EYVDAGTIARAMLDRR+ Sbjct: 181 EYVDAGTIARAMLDRRS 197 >C5AFH8.1 C5AFH8_BURGB Recombination protein recR Length = 198 Score = 310 bits (793), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 140/197 (71%), Positives = 171/197 (86%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +K PS+L+ L ++LR LPG+GPK+AQRMAYHL+QHDR+ A L QSL A ++HC C Sbjct: 1 MKQPSALSALVEALRVLPGVGPKSAQRMAYHLMQHDREGAERLGQSLLFATQHLQHCEKC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE +CE C D++RD + LCVVE+P+DQ+M+EQTLT++GLYFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTEAQICEVCSDTERDPSLLCVVETPADQIMLEQTLTYRGLYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 +IH ++L+ RA+DG+V EVVLATNFTNEGEATAHY+ +TLKARGL V+RLARGVPVGGEL Sbjct: 121 EIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLSVTRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRT 197 EYVDAGTIARAMLDRRT Sbjct: 181 EYVDAGTIARAMLDRRT 197 >B9B817.1 B9B817_9BURK Recombination protein recR Length = 198 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 140/197 (71%), Positives = 171/197 (86%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +K PS+L+ L ++LR LPG+GPK+AQRMAYHL+QHDR+ A L +SL A + +RHC C Sbjct: 1 MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLRHCDKC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE +CE C D +RD T LCVVE+P+DQ+M+EQT+T++GLYFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 +IH ++L+ RA+DG+V EVVLATNFTNEGEATAHY+ +TLKARGL V+RLARGVPVGGEL Sbjct: 121 EIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRT 197 EYVDAGTIARAMLDRRT Sbjct: 181 EYVDAGTIARAMLDRRT 197 >A9AGY1.1 RECR_BURM1 Recombination protein recR Length = 198 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 140/197 (71%), Positives = 171/197 (86%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +K PS+L+ L ++LR LPG+GPK+AQRMAYHL+QHDR+ A L +SL A + +RHC C Sbjct: 1 MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDREGAERLGRSLLFATEHLRHCDKC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE +CE C D +RD T LCVVE+P+DQ+M+EQT+T++GLYFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTEAQICEVCSDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 +IH ++L+ RA+DG+V EVVLATNFTNEGEATAHY+ +TLKARGL V+RLARGVPVGGEL Sbjct: 121 EIHFDRLVRRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRT 197 EYVDAGTIARAMLDRRT Sbjct: 181 EYVDAGTIARAMLDRRT 197 >B1FYT9.1 B1FYT9_9BURK Recombination protein recR Length = 198 Score = 310 bits (793), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 139/197 (70%), Positives = 172/197 (87%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +K PS+L+ L ++LR LPG+GPK+AQRMAYHL+QHDRD A L ++L A + ++HC C Sbjct: 1 MKQPSALSALVEALRVLPGVGPKSAQRMAYHLMQHDRDGAEKLGRALLFATEHLQHCEKC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE +CE C DS+RD T LCVVE+P+DQ+M+EQT+T++GLYFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTEAQICEVCLDSERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 +IH ++L+ RA+DG+V EVVLATNFTNEGEATAHY+ +TLKARGL V+RLARGVPVGGEL Sbjct: 121 EIHFDRLVKRASDGIVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRT 197 EYVDAGTIARAMLDRR+ Sbjct: 181 EYVDAGTIARAMLDRRS 197 >Q13Z78.1 RECR_BURXL Recombination protein recR Length = 198 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 140/197 (71%), Positives = 171/197 (86%) Query: 1 LKTPSSLTVLTDSLRRLPGIGPKTAQRMAYHLLQHDRDAAADLSQSLAKALDTIRHCALC 60 +K PS+L+ L ++LR LPG+GPK+AQRMAYHL+QHDRD A L +SL A + ++HC C Sbjct: 1 MKQPSALSALVEALRALPGVGPKSAQRMAYHLMQHDRDGAEKLGRSLLFATEHLQHCEKC 60 Query: 61 NTFTEQVVCETCQDSQRDHTQLCVVESPSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPR 120 NTFTE +CE C D +RD T LCVVE+P+DQ+M+EQT+T++GLYFVLMGRLSPLDGIGP+ Sbjct: 61 NTFTEAQICEVCLDEERDPTLLCVVETPADQIMLEQTMTYRGLYFVLMGRLSPLDGIGPK 120 Query: 121 DIHLEKLITRATDGVVSEVVLATNFTNEGEATAHYISETLKARGLKVSRLARGVPVGGEL 180 +IH ++L+ RA+DGVV EVVLATNFTNEGEATAHY+ +TLKARGL V+RLARGVPVGGEL Sbjct: 121 EIHFDRLVRRASDGVVKEVVLATNFTNEGEATAHYLGQTLKARGLAVTRLARGVPVGGEL 180 Query: 181 EYVDAGTIARAMLDRRT 197 EYVDAGTIARAMLDRR+ Sbjct: 181 EYVDAGTIARAMLDRRS 197