BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0036.p         (202 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J0Q5.1 D8J0Q5_HERSS Putative uncharacterized protein                370   e-101

>D8J0Q5.1 D8J0Q5_HERSS Putative uncharacterized protein
          Length = 202

 Score =  370 bits (949), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/203 (95%), Positives = 196/203 (96%), Gaps = 2/203 (0%)

Query: 1   MSAYQNFLDFFTMYNRERLDGLNETYFAPMTAEERSKAFDHLLEMTRPGGSDESVKGLFL 60
           MSAYQNFLDFFTMYNRERLDGLNETYFAPMTAEERSKAFDHLLEMTRPGGSDESVKGLFL
Sbjct: 1   MSAYQNFLDFFTMYNRERLDGLNETYFAPMTAEERSKAFDHLLEMTRPGGSDESVKGLFL 60

Query: 61  ADAERAVPVVRELLEQGVLNDDAALAAAWELYRRQPDPALIEVFLRLARARARA-RARAR 119
           ADAERAVPVVRELLEQGVLNDDAALAAAWELYRRQPDPALIEVFLRL  +  R  R+RA 
Sbjct: 61  ADAERAVPVVRELLEQGVLNDDAALAAAWELYRRQPDPALIEVFLRLMSSTDRTLRSRA- 119

Query: 120 AFYVPADESNEALLEALRGMIRTETETLPLVNATNKLLECYGITEDSLPEAQYLRLYRGL 179
           AFYVPADESNEALLEALRGMIRTETETLPLVNATNKLLECYGITEDSLPEAQYLRLYRGL
Sbjct: 120 AFYVPADESNEALLEALRGMIRTETETLPLVNATNKLLECYGITEDSLPEAQYLRLYRGL 179

Query: 180 RSDDLKTKEATFKDLDRLFGLDA 202
           RSDDLKTKEATFKDLDRLFGLDA
Sbjct: 180 RSDDLKTKEATFKDLDRLFGLDA 202