BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0025.p (578 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQD3.1 D8IQD3_HERSS ABC-type multidrug transport system, ATPas... 1168 0.0 A6SVC8.1 A6SVC8_JANMA ABC-type multidrug transport system, ATPas... 833 0.0 A4G2D7.1 A4G2D7_HERAR Lipid A export ATP-binding/permease protei... 807 0.0 F1VXL9.1 F1VXL9_9BURK Lipid A export ATP-binding/permease protei... 796 0.0 C3X7L6.1 C3X7L6_OXAFO Lipid ABC transporter membrane/ATP-binding... 672 0.0 C6BK37.1 C6BK37_RALP1 Lipid A ABC exporter, fused ATPase and inn... 581 e-164 B2U901.1 B2U901_RALPJ Lipid A ABC exporter, fused ATPase and inn... 581 e-163 E2T1F8.1 E2T1F8_9RALS Lipid A export permease/ATP-binding protei... 580 e-163 D8N9R6.1 D8N9R6_RALSO Lipid A export ATP-binding/permease protei... 580 e-163 Q8XXB6.1 MSBA_RALSO Lipid A export ATP-binding/permease protein ... 579 e-163 >D8IQD3.1 D8IQD3_HERSS ABC-type multidrug transport system, ATPase and permease components protein Length = 578 Score = 1168 bits (3022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 575/578 (99%), Positives = 576/578 (99%) Query: 1 MLSNNMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLV 60 MLSNNMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLV Sbjct: 1 MLSNNMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLV 60 Query: 61 PVAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINS 120 PVAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINS Sbjct: 61 PVAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINS 120 Query: 121 MMFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGK 180 MMFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGK Sbjct: 121 MMFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGK 180 Query: 181 RLKKLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAA 240 RLKKLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAA Sbjct: 181 RLKKLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAA 240 Query: 241 FSSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGP 300 FSSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGP Sbjct: 241 FSSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGP 300 Query: 301 LQRGMAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVE 360 LQRGMAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVE Sbjct: 301 LQRGMAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVE 360 Query: 361 AGETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTV 420 AGETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISL SLRQQIAMVNQNTV Sbjct: 361 AGETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLPSLRQQIAMVNQNTV 420 Query: 421 LFDDTLAANIAYGDAHPDPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQR 480 LFDDTLAANIAYGDA+PDPARVEAAVEAAHL DVVAGLPEGLQTRLGDNGSRLSGGQRQR Sbjct: 421 LFDDTLAANIAYGDANPDPARVEAAVEAAHLTDVVAGLPEGLQTRLGDNGSRLSGGQRQR 480 Query: 481 VAIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRI 540 VAIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRI Sbjct: 481 VAIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRI 540 Query: 541 VVLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQASV 578 VVLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQASV Sbjct: 541 VVLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQASV 578 >A6SVC8.1 A6SVC8_JANMA ABC-type multidrug transport system, ATPase and permease components Length = 578 Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/574 (70%), Positives = 491/574 (85%) Query: 1 MLSNNMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLV 60 ++S ++KRL + PYKKRLAVA + MI+TA TEP+ P + +VLLDKGF GKP+FSLWLV Sbjct: 2 IVSPHLKRLFGMLAPYKKRLAVALLGMIMTALTEPMFPAVMRVLLDKGFGGKPSFSLWLV 61 Query: 61 PVAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINS 120 PVA++GIF +RGI+TFT++YMMTWVS+R+L LR+QMF RMLD+PL FYAT++VG+VINS Sbjct: 62 PVAIVGIFVLRGISTFTTTYMMTWVSSRLLTTLRKQMFERMLDVPLGFYATHSVGRVINS 121 Query: 121 MMFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGK 180 MMFEVQQII+M+TKV+TSI+R +LTV+ LL++L +LNW LT+V LVLLPL+ +VVR TG+ Sbjct: 122 MMFEVQQIIEMITKVYTSIIRDSLTVIVLLSFLFWLNWRLTLVALVLLPLIAIVVRATGR 181 Query: 181 RLKKLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAA 240 RL++L R+ VN EMTQVIEETTRA QVIKIFGG YE+ERF RA+ LR YTMRM A Sbjct: 182 RLRRLTREYQTVNGEMTQVIEETTRANQVIKIFGGHRYEEERFEVRADKLRGYTMRMATA 241 Query: 241 FSSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGP 300 ++T P+TQ+M +TAVA+VIV+ALIQSG Q TVGGFVSFITAMLMLLTPLK +AE+NGP Sbjct: 242 MAATTPVTQVMASTAVAIVIVIALIQSGQNQTTVGGFVSFITAMLMLLTPLKNIAEVNGP 301 Query: 301 LQRGMAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVE 360 LQRG+ AAE V+KLID ER G+ LA RA G+LDFV +GF YPG + +AL++INL V+ Sbjct: 302 LQRGLTAAEAVFKLIDAEPERTNGKDLAARAAGRLDFVRLGFTYPGQQTMALQDINLSVQ 361 Query: 361 AGETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTV 420 GETIAFVGMSGGGKSTLV+L+PGFYS ++GEI+LDG IE ISL SLR+QIAMV+Q+ V Sbjct: 362 PGETIAFVGMSGGGKSTLVNLVPGFYSATAGEIQLDGVSIEEISLSSLRKQIAMVSQHVV 421 Query: 421 LFDDTLAANIAYGDAHPDPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQR 480 LFDDT+AANIAYGDA+PD R+ AA AAHL++V+AGLPEGL+T +GDNGSRLSGGQRQR Sbjct: 422 LFDDTIAANIAYGDANPDRTRIMAAAHAAHLDEVIAGLPEGLETMIGDNGSRLSGGQRQR 481 Query: 481 VAIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRI 540 +AIARAIYKDAPILILDEATSALD+ESERAVQAALD LM+GRTT VIAHRLSTIERADRI Sbjct: 482 LAIARAIYKDAPILILDEATSALDSESERAVQAALDELMKGRTTLVIAHRLSTIERADRI 541 Query: 541 VVLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQ 574 VLA G I E+G+HQ LL + GVYANLY LQF++ Sbjct: 542 AVLAEGHIVELGSHQELLARNGVYANLYHLQFAK 575 >A4G2D7.1 A4G2D7_HERAR Lipid A export ATP-binding/permease protein MsbA EC=3.6.3.- Length = 581 Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/574 (68%), Positives = 486/574 (84%) Query: 2 LSNNMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLVP 61 +S ++KRL + PYKKRLAVAFI MI+TA TEP+ P + ++LLDKGF GKP FSLWLVP Sbjct: 3 ISPHLKRLYGMLGPYKKRLAVAFIGMIMTALTEPMFPAVMRLLLDKGFGGKPTFSLWLVP 62 Query: 62 VAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINSM 121 +A+IGIF +RGI+TFT++Y MTWVS+R+L+ LR++MF R+LD+PL FY T++VG+VINSM Sbjct: 63 LAIIGIFVLRGISTFTTTYTMTWVSSRLLSTLRKKMFERILDVPLGFYGTHSVGRVINSM 122 Query: 122 MFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGKR 181 MFEVQQII+M+TKV+TSI+R +LTV+ LLA+L +LNW LT+V LVLLPL+ +VVR TGKR Sbjct: 123 MFEVQQIIEMITKVYTSIIRDSLTVIVLLAFLFWLNWRLTLVALVLLPLIAIVVRFTGKR 182 Query: 182 LKKLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAF 241 +++L R+ AVNAEMTQVIEE+TRA QVIKIFGG YE +RF RA+ LRSYTMRM + Sbjct: 183 VRRLTREYQAVNAEMTQVIEESTRANQVIKIFGGHQYENDRFEVRADKLRSYTMRMASTL 242 Query: 242 SSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPL 301 ++T P+TQ+M + AVA+VIV+ALIQS Q TVGGFVSFITAMLMLL PLK +AE+NGPL Sbjct: 243 AATTPVTQIMASCAVAIVIVIALIQSEQNQTTVGGFVSFITAMLMLLAPLKNIAEVNGPL 302 Query: 302 QRGMAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEA 361 Q+G+ AAE V+ LID ER +G+ L RA G+LDF+ +GF+YPGH+ +AL++INL V Sbjct: 303 QKGLTAAEAVFGLIDAKPERTSGKTLEARAAGKLDFINLGFSYPGHQSMALEDINLSVLP 362 Query: 362 GETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVL 421 GETIAFVGMSGGGKSTLV+L+PGFY + GEIRLD IE I+L SLR+QIAMV+Q+ VL Sbjct: 363 GETIAFVGMSGGGKSTLVNLVPGFYPATVGEIRLDDVPIEEIALTSLRRQIAMVSQHVVL 422 Query: 422 FDDTLAANIAYGDAHPDPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRV 481 FDDT+AANIAYGD PD AR+ AA AAHL+DV+AGLP+GL+T +GDNGSRLSGGQRQR+ Sbjct: 423 FDDTIAANIAYGDETPDRARILAAATAAHLDDVIAGLPQGLETMIGDNGSRLSGGQRQRL 482 Query: 482 AIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIV 541 AIARAIYKDAPILILDEATSALD+ESERAVQAALD LM+GRTT VIAHRLSTIERADRI Sbjct: 483 AIARAIYKDAPILILDEATSALDSESERAVQAALDALMKGRTTLVIAHRLSTIERADRIA 542 Query: 542 VLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQ 575 VLA G+I E+G+HQ LLE+ VYANLY LQF+++ Sbjct: 543 VLAEGRIVELGSHQELLEKNAVYANLYHLQFAKE 576 >F1VXL9.1 F1VXL9_9BURK Lipid A export ATP-binding/permease protein MsbA Length = 578 Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/575 (66%), Positives = 468/575 (81%) Query: 2 LSNNMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLVP 61 S ++ RLA + P++ RL +AF+ M +TA+TEP+ P + + LLD GFVGK LW VP Sbjct: 3 FSPHLMRLARMLKPFRGRLGLAFLGMAITASTEPMFPAVMKTLLDNGFVGKSTIPLWTVP 62 Query: 62 VAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINSM 121 VAVIG+F +RG++TF ++YMMTWVST +LN LRRQMF+R+LD+P FY +VG+VINSM Sbjct: 63 VAVIGMFVLRGLSTFLTTYMMTWVSTHLLNILRRQMFSRLLDVPAQFYERTSVGRVINSM 122 Query: 122 MFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGKR 181 MFEVQQII+MVTKVFTS++R +LTV+ LLA+LL+LNW LTIV LVLLPL+ +VVR TGKR Sbjct: 123 MFEVQQIIEMVTKVFTSLIRDSLTVIVLLAFLLWLNWRLTIVALVLLPLMAIVVRMTGKR 182 Query: 182 LKKLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAF 241 L+KL RD L VNAE+TQVIEETTRAQQVIKIFGG DYEK RF +RA LR+Y+MRM + F Sbjct: 183 LRKLTRDFLDVNAELTQVIEETTRAQQVIKIFGGHDYEKNRFEQRAIKLRNYSMRMASTF 242 Query: 242 SSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPL 301 ++TVPITQ+M + AV+VVIV+AL+QSG QIT GGFVSFITAMLMLLTPLK LAE+NGPL Sbjct: 243 AATVPITQIMASCAVSVVIVIALLQSGQNQITAGGFVSFITAMLMLLTPLKHLAEVNGPL 302 Query: 302 QRGMAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEA 361 QRG+AAAE V+ LID ER G AL GR+ G ++F V FAYP AL NINL + Sbjct: 303 QRGIAAAEAVFALIDTPPERTNGVALTGRSVGHIEFQNVCFAYPEQTLPALANINLTIHP 362 Query: 362 GETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVL 421 GET+AFVG+SGGGKSTLV+L+PGF++ SG+I LDG ++++SL SLR Q+AMV+QN VL Sbjct: 363 GETVAFVGISGGGKSTLVNLVPGFHTPQSGQICLDGAPLDSLSLTSLRSQMAMVSQNVVL 422 Query: 422 FDDTLAANIAYGDAHPDPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRV 481 FDDT+AANIAYGD PD R+EAA AAHL +++ GLP+G + +GDNGSRLSGGQRQR+ Sbjct: 423 FDDTVAANIAYGDPQPDRERIEAAASAAHLTEMIMGLPKGFDSPIGDNGSRLSGGQRQRM 482 Query: 482 AIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIV 541 AIARAIYKDAPILILDEATSALD ESERAVQ+AL LMQ RTT VIAHRLSTIERADRIV Sbjct: 483 AIARAIYKDAPILILDEATSALDNESERAVQSALVDLMQNRTTLVIAHRLSTIERADRIV 542 Query: 542 VLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQA 576 VL G I E+GTH LL ++GVYA+L+ LQF ++A Sbjct: 543 VLVSGHIVELGTHAELLARDGVYASLHHLQFEKEA 577 >C3X7L6.1 C3X7L6_OXAFO Lipid ABC transporter membrane/ATP-binding protein Length = 583 Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/573 (55%), Positives = 432/573 (75%) Query: 2 LSNNMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLVP 61 LS+ +KRL L YK R+ + I M++TA TEP+ P I + +LD GFV P FS WLVP Sbjct: 11 LSSPIKRLIKLALQYKGRMILVLIGMLITAGTEPIFPVILKFVLDDGFVKNPTFSFWLVP 70 Query: 62 VAVIGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINSM 121 +IG+F IRG ATF + Y M W+++ ++N+LR +M+ R+L + FY+ +++G+V+NS+ Sbjct: 71 FVIIGVFVIRGSATFLTDYTMAWITSNLVNQLREKMYVRVLRVGRDFYSKHSLGQVVNSL 130 Query: 122 MFEVQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGKR 181 M+E Q++D++ + TSI+R LT GL +LL+LNW LTIVT++L+PLV++V+R +G+R Sbjct: 131 MYEANQVVDLLRNIMTSIVRDILTAFGLFVYLLWLNWRLTIVTMILIPLVSVVMRLSGRR 190 Query: 182 LKKLNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAF 241 L+KLN D VNA++T+++ ETTRA +VIKIF G+ +E+ RF + LR + M+M + Sbjct: 191 LRKLNEDFRNVNAQLTKMLTETTRASEVIKIFNGETFEQNRFRQCIYQLRRFMMKMVSTQ 250 Query: 242 SSTVPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPL 301 + T+P+TQL+ AT V+++I++ALIQS + Q TVGGFVSFITAMLM+L PL++LA++N L Sbjct: 251 AMTMPLTQLIAATGVSIIILIALIQSSHDQTTVGGFVSFITAMLMMLPPLRRLADVNNNL 310 Query: 302 QRGMAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEA 361 Q G+ A + V+ L++ ER G L GRA G+L+F V F+Y G + AL +++L V Sbjct: 311 QAGIVATKSVFDLMNSPIERQDGFDLPGRARGKLEFDHVTFSYEGQAKPALSDVSLTVNP 370 Query: 362 GETIAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVL 421 GET+A VGMSGGGKSTL L+P FY+ SGEIRLDG + +SL+SLR QIAMVNQ VL Sbjct: 371 GETLALVGMSGGGKSTLSHLVPEFYAPVSGEIRLDGVPLHKLSLKSLRSQIAMVNQQVVL 430 Query: 422 FDDTLAANIAYGDAHPDPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRV 481 FD T+A NIAYGDA+PD +R++AA+EAA+L DV+ LPEGL + +G NG SGGQRQR+ Sbjct: 431 FDGTVAENIAYGDANPDVSRIKAAIEAAYLKDVIEQLPEGLNSPVGVNGMSFSGGQRQRI 490 Query: 482 AIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIV 541 AIARAIYKDAPILILDEATSALDTESE+AVQ+AL+ LM+GRTT VIAHRLSTIE ADRI Sbjct: 491 AIARAIYKDAPILILDEATSALDTESEKAVQSALNTLMKGRTTIVIAHRLSTIEHADRIA 550 Query: 542 VLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQ 574 V+ G+I EIGTH LLE+ G Y+NLY LQF + Sbjct: 551 VITSGKIVEIGTHAELLEKNGTYSNLYHLQFKE 583 >C6BK37.1 C6BK37_RALP1 Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Length = 574 Score = 581 bits (1498), Expect = e-164, Method: Compositional matrix adjust. Identities = 292/573 (50%), Positives = 401/573 (69%), Gaps = 3/573 (0%) Query: 6 MKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLVPVAVI 65 +KRL P +A +AM V AATE ++P + + LLD+GF G+ A LW VP ++ Sbjct: 2 LKRLWGYLRPELTAFILAMVAMGVVAATEGIIPKVVKDLLDQGFGGEYAGKLWQVPAMLV 61 Query: 66 GIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINSMMFEV 125 GI +RGIA F S+Y+++ VS ++L LR +MF R+L P +Y NT +IN+++FEV Sbjct: 62 GIAVVRGIAQFASTYLLSLVSNKVLLNLRMKMFERLLQAPASYYQRNTAASIINAVIFEV 121 Query: 126 QQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGKRLKKL 185 Q++ ++T VF +++R ++TVL LL +L Y NW LT+V V+LP++ L++ +RL+ L Sbjct: 122 NQVLQVLTGVFITLVRDSMTVLALLIFLFYTNWRLTLVVAVILPIIGLLMSRINRRLRSL 181 Query: 186 NRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAFSSTV 245 NR+S + + V+EE +V+K+ GG+ YE RFN LR Y MR+ A Sbjct: 182 NRESQNLTNQAAYVVEEAVGGYKVVKLHGGEAYESLRFNAMTNRLRGYAMRVAVAGGLNQ 241 Query: 246 PITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRGM 305 P+TQ + A A++V++ +A++Q+ Q TVGGF F+ AML+L++PLK L ++N PLQRG+ Sbjct: 242 PVTQFLAALALSVILAIAMLQAQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPLQRGL 301 Query: 306 AAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGETI 365 AAE ++ LID E G RA G + F V F Y + AL N+NLHV+ GE + Sbjct: 302 TAAEFIFGLIDTPIEPQEGGKKIDRARGDVRFDNVTFRYGEDGRAALDNVNLHVKPGEVV 361 Query: 366 AFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDDT 425 A VG SG GK+TLV+L+P F+ +SG I LDG + ++L LR+QIA V+Q+ VLF+DT Sbjct: 362 ALVGPSGSGKTTLVNLLPRFFDPTSGTISLDGDALADLALHDLRRQIAFVSQDVVLFNDT 421 Query: 426 LAANIAYG--DAHP-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRVA 482 +AAN+AYG DA D ARV A+EAA+L DVV LPEG+ T +GDNGS+LSGGQRQR+A Sbjct: 422 IAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPEGIDTNVGDNGSKLSGGQRQRLA 481 Query: 483 IARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIVV 542 IARAIYKDAPILILDEATSALD+ESER VQAAL+RLM+GRTT VIAHRLSTIE ADRI+V Sbjct: 482 IARAIYKDAPILILDEATSALDSESERQVQAALERLMEGRTTLVIAHRLSTIENADRIIV 541 Query: 543 LAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQ 575 L HG+IAE GTH+ L+E++G+YA L+R+QF+ Q Sbjct: 542 LEHGKIAEAGTHRELIERDGLYAGLHRIQFATQ 574 >B2U901.1 B2U901_RALPJ Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Length = 574 Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust. Identities = 292/573 (50%), Positives = 401/573 (69%), Gaps = 3/573 (0%) Query: 6 MKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLVPVAVI 65 +KRL P +A +AM V AATE ++P + + LLD+GF G+ A LW VP ++ Sbjct: 2 LKRLWGYLRPELTAFILAMVAMGVVAATEGIIPKVVKDLLDQGFGGEYAGKLWQVPAMLV 61 Query: 66 GIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINSMMFEV 125 GI +RGIA F S+Y+++ VS ++L LR +MF R+L P +Y NT +IN+++FEV Sbjct: 62 GIAVVRGIAQFASTYLLSLVSNKVLLNLRMKMFERLLQAPASYYQRNTAASIINAVIFEV 121 Query: 126 QQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGKRLKKL 185 Q++ ++T VF +++R ++TVL LL +L Y NW LT+V V+LP++ L++ +RL+ L Sbjct: 122 NQVLQVLTGVFITLVRDSMTVLALLIFLFYTNWRLTLVVAVILPIIGLLMSRINRRLRSL 181 Query: 186 NRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAFSSTV 245 NR+S + + V+EE +V+K+ GG+ YE RFN LR Y MR+ A Sbjct: 182 NRESQNLTNQAAYVVEEAVGGYKVVKLHGGEAYESLRFNAMTNRLRGYAMRVAVAGGLNQ 241 Query: 246 PITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRGM 305 P+TQ + A A++V++ +A++Q+ Q TVGGF F+ AML+L++PLK L ++N PLQRG+ Sbjct: 242 PVTQFLAALALSVILAIAMMQAQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPLQRGL 301 Query: 306 AAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGETI 365 AAE ++ LID E G RA G + F V F Y + AL N+NLHV+ GE + Sbjct: 302 TAAEFIFGLIDTPIEPQEGGKKIDRARGDVRFDNVTFRYGEDGRAALDNVNLHVKPGEVV 361 Query: 366 AFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDDT 425 A VG SG GK+TLV+L+P F+ +SG I LDG + ++L LR+QIA V+Q+ VLF+DT Sbjct: 362 ALVGPSGSGKTTLVNLLPRFFDPTSGTISLDGDALADLALHDLRRQIAFVSQDVVLFNDT 421 Query: 426 LAANIAYG--DAHP-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRVA 482 +AAN+AYG DA D ARV A+EAA+L DVV LPEG+ T +GDNGS+LSGGQRQR+A Sbjct: 422 IAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPEGIDTNVGDNGSKLSGGQRQRLA 481 Query: 483 IARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIVV 542 IARAIYKDAPILILDEATSALD+ESER VQAAL+RLM+GRTT VIAHRLSTIE ADRI+V Sbjct: 482 IARAIYKDAPILILDEATSALDSESERQVQAALERLMEGRTTLVIAHRLSTIENADRIIV 541 Query: 543 LAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQ 575 L HG+IAE GTH+ L+E++G+YA L+R+QF+ Q Sbjct: 542 LEHGKIAEAGTHRELIERDGLYAGLHRIQFATQ 574 >E2T1F8.1 E2T1F8_9RALS Lipid A export permease/ATP-binding protein MsbA Length = 589 Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust. Identities = 292/573 (50%), Positives = 401/573 (69%), Gaps = 3/573 (0%) Query: 6 MKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLVPVAVI 65 +KRL P +A +AM V AATE ++P + + LLD+GF G+ A LW VP ++ Sbjct: 17 LKRLWGYLRPELTAFILAMVAMGVVAATEGIIPKVVKDLLDQGFGGEYAGKLWQVPAMLV 76 Query: 66 GIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINSMMFEV 125 GI +RGIA F S+Y+++ VS ++L LR +MF R+L P +Y NT +IN+++FEV Sbjct: 77 GIAVVRGIAQFASTYLLSLVSNKVLLNLRMKMFERLLQAPASYYQRNTAASIINAVIFEV 136 Query: 126 QQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGKRLKKL 185 Q++ ++T VF +++R ++TVL LL +L Y NW LT+V V+LP++ L++ +RL+ L Sbjct: 137 NQVLQVLTGVFITLVRDSMTVLALLIFLFYTNWRLTLVVAVILPIIGLLMSRINRRLRSL 196 Query: 186 NRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAFSSTV 245 NR+S + + V+EE +V+K+ GG+ YE RFN LR Y MR+ A Sbjct: 197 NRESQNLTNQAAYVVEEAVGGYKVVKLHGGEAYESLRFNAMTNRLRGYAMRVAVAGGLNQ 256 Query: 246 PITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRGM 305 P+TQ + A A++V++ +A++Q+ Q TVGGF F+ AML+L++PLK L ++N PLQRG+ Sbjct: 257 PVTQFLAALALSVILAIAMMQAQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPLQRGL 316 Query: 306 AAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGETI 365 AAE ++ LID E G RA G + F V F Y + AL N+NLHV+ GE + Sbjct: 317 TAAEFIFGLIDTPIEPQEGGKKIDRARGDVRFDNVTFRYGEDGRAALDNVNLHVKPGEVV 376 Query: 366 AFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDDT 425 A VG SG GK+TLV+L+P F+ +SG I LDG + ++L LR+QIA V+Q+ VLF+DT Sbjct: 377 ALVGPSGSGKTTLVNLLPRFFDPTSGTISLDGDALADLALHDLRRQIAFVSQDVVLFNDT 436 Query: 426 LAANIAYG--DAHP-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRVA 482 +AAN+AYG DA D ARV A+EAA+L DVV LPEG+ T +GDNGS+LSGGQRQR+A Sbjct: 437 IAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPEGIDTNVGDNGSKLSGGQRQRLA 496 Query: 483 IARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIVV 542 IARAIYKDAPILILDEATSALD+ESER VQAAL+RLM+GRTT VIAHRLSTIE ADRI+V Sbjct: 497 IARAIYKDAPILILDEATSALDSESERQVQAALERLMEGRTTLVIAHRLSTIENADRIIV 556 Query: 543 LAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQ 575 L HG+IAE GTH+ L+E++G+YA L+R+QF+ Q Sbjct: 557 LEHGKIAEAGTHRELIERDGLYAGLHRIQFATQ 589 >D8N9R6.1 D8N9R6_RALSO Lipid A export ATP-binding/permease protein EC=3.6.3.- Length = 592 Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust. Identities = 294/574 (51%), Positives = 399/574 (69%), Gaps = 3/574 (0%) Query: 5 NMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLVPVAV 64 + KRL A P +A +AM V AATE ++P + + LLD+GF G+ A LW VP + Sbjct: 19 HFKRLWAYLRPELSSFILAMVAMGVVAATEGIIPKVVKDLLDQGFGGEYAGKLWRVPAML 78 Query: 65 IGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINSMMFE 124 +GI +RG+A F ++Y ++ VS ++L LR +MF R+L P FY NT +IN+++FE Sbjct: 79 VGIAVVRGVAQFGATYFLSLVSNKVLLNLRMKMFERLLQAPAAFYQRNTAATLINAVIFE 138 Query: 125 VQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGKRLKK 184 V Q++ ++T VF +++R ++TVL LL +L Y NW LT+V V+LP++ ++ +RL+ Sbjct: 139 VNQVLQVLTGVFITLVRDSMTVLALLIFLFYTNWRLTLVVAVILPVIGFLMSRINRRLRS 198 Query: 185 LNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAFSST 244 LNR+ + E V+EE +V+K+ GG+ YE RFN LR Y MRM A Sbjct: 199 LNREHQNLTNEAAYVVEEAAGGYKVVKLHGGEAYESRRFNAMTNRLRGYAMRMAVAGGLN 258 Query: 245 VPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRG 304 P+TQ + A A++V++ +A++Q+ Q TVGGF F+ AML+L++PLK L ++N P+QRG Sbjct: 259 QPVTQFLAALALSVILAIAMVQAQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPMQRG 318 Query: 305 MAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGET 364 + AAE ++ LID E G RA G L F V F Y + AL +I+LHV+AGE Sbjct: 319 LTAAEFIFGLIDTPIEPQDGGKHIDRARGDLRFEHVTFRYGPDGRAALDSIDLHVKAGEI 378 Query: 365 IAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDD 424 +A VG SG GK+TLV+L+P F+ +SG I LDG + +SLQ LR+QIA V+Q+ VLF+D Sbjct: 379 VALVGPSGSGKTTLVNLLPRFFEPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFND 438 Query: 425 TLAANIAYG--DAHP-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRV 481 T+AAN+AYG DA D ARV A+EAA+L DVV LP+G+ T +GDNGS+LSGGQRQR+ Sbjct: 439 TIAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRL 498 Query: 482 AIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIV 541 AIARAIYKDAPILILDEATSALD+ESER VQAAL+ LMQGRTT VIAHRLSTIE ADRIV Sbjct: 499 AIARAIYKDAPILILDEATSALDSESERQVQAALEALMQGRTTLVIAHRLSTIENADRIV 558 Query: 542 VLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQ 575 VL HGQI E GTH+ LL+++G+YA L+R+QF+ Q Sbjct: 559 VLEHGQIVEAGTHRELLDRDGLYAGLHRIQFATQ 592 >Q8XXB6.1 MSBA_RALSO Lipid A export ATP-binding/permease protein MsbA EC=3.6.3.- Length = 592 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 293/574 (51%), Positives = 399/574 (69%), Gaps = 3/574 (0%) Query: 5 NMKRLAALHWPYKKRLAVAFIAMIVTAATEPVVPYIFQVLLDKGFVGKPAFSLWLVPVAV 64 + KRL A P +A +AM V AATE ++P + + LLD+GF G+ A LW VP + Sbjct: 19 HFKRLWAYLRPELSSFILAMVAMGVVAATEGIIPKVVKDLLDQGFGGEYAGKLWRVPAML 78 Query: 65 IGIFFIRGIATFTSSYMMTWVSTRILNELRRQMFARMLDLPLHFYATNTVGKVINSMMFE 124 +GI +RG+A F ++Y ++ VS ++L LR +MF R+L P FY NT +IN+++FE Sbjct: 79 VGIAVVRGVAQFGATYFLSLVSNKVLLNLRMKMFERLLQAPAAFYQRNTAASLINAVIFE 138 Query: 125 VQQIIDMVTKVFTSILRSALTVLGLLAWLLYLNWVLTIVTLVLLPLVTLVVRTTGKRLKK 184 V Q++ ++T VF +++R ++TVL LL +L Y NW LT+V V+LP++ ++ +RL+ Sbjct: 139 VNQVLQVLTGVFITLVRDSMTVLALLIFLFYTNWRLTLVVAVILPVIGFLMSRINRRLRS 198 Query: 185 LNRDSLAVNAEMTQVIEETTRAQQVIKIFGGQDYEKERFNRRAENLRSYTMRMTAAFSST 244 LNR+ + E V+EE +V+K+ GG+ YE RFN LR Y MRM A Sbjct: 199 LNREHQNLTNEAAYVVEEAAGGYKVVKLHGGEAYESRRFNAMTNRLRGYAMRMAVAGGLN 258 Query: 245 VPITQLMTATAVAVVIVMALIQSGNGQITVGGFVSFITAMLMLLTPLKQLAEINGPLQRG 304 P+TQ + A A++V++ +A++Q+ Q TVGGF F+ AML+L++PLK L ++N P+QRG Sbjct: 259 QPVTQFLAALALSVILAIAMVQAQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPMQRG 318 Query: 305 MAAAEEVYKLIDKTTERITGEALAGRATGQLDFVEVGFAYPGHEQLALKNINLHVEAGET 364 + AAE ++ LID E G RA G L F V F Y + AL +I+LHV+AGE Sbjct: 319 LTAAEFIFGLIDTPIEPQDGGKHIDRARGDLRFEHVTFRYGPDGRAALDSIDLHVKAGEI 378 Query: 365 IAFVGMSGGGKSTLVSLIPGFYSCSSGEIRLDGRDIETISLQSLRQQIAMVNQNTVLFDD 424 +A VG SG GK+TLV+L+P F+ +SG I LDG + +SLQ LR+QIA V+Q+ VLF+D Sbjct: 379 VALVGPSGSGKTTLVNLLPRFFEPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFND 438 Query: 425 TLAANIAYG--DAHP-DPARVEAAVEAAHLNDVVAGLPEGLQTRLGDNGSRLSGGQRQRV 481 T+AAN+AYG DA D ARV A+EAA+L DVV LP+G+ T +GDNGS+LSGGQRQR+ Sbjct: 439 TIAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRL 498 Query: 482 AIARAIYKDAPILILDEATSALDTESERAVQAALDRLMQGRTTFVIAHRLSTIERADRIV 541 AIARA+YKDAPILILDEATSALD+ESER VQAAL+ LMQGRTT VIAHRLSTIE ADRIV Sbjct: 499 AIARAVYKDAPILILDEATSALDSESERQVQAALEALMQGRTTLVIAHRLSTIENADRIV 558 Query: 542 VLAHGQIAEIGTHQALLEQEGVYANLYRLQFSQQ 575 VL HGQI E GTH+ LL+++G+YA L+R+QF+ Q Sbjct: 559 VLEHGQIVEAGTHRELLDRDGLYAGLHRIQFATQ 592