BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0020.p (1135 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQD8.1 D8IQD8_HERSS DNA polymerase III (Alpha chain) protein E... 2328 0.0 A6SVC7.1 A6SVC7_JANMA DNA polymerase III alpha subunit 1805 0.0 A4G2D5.1 A4G2D5_HERAR DNA polymerase III, alpha subunit EC=2.7.7.7 1793 0.0 F1W087.1 F1W087_9BURK DNA polymerase III alpha subunit 1778 0.0 C3X1A7.1 C3X1A7_OXAFO DNA polymerase III 1626 0.0 C3X7L4.1 C3X7L4_OXAFO DNA polymerase III alpha subunit 1624 0.0 B2T257.1 B2T257_BURPP DNA polymerase III, alpha subunit EC=2.7.7.7 1536 0.0 B2JE49.1 B2JE49_BURP8 DNA polymerase III, alpha subunit EC=2.7.7.7 1532 0.0 Q142P8.1 Q142P8_BURXL DNA polymerase III, alpha subunit EC=2.7.7.7 1531 0.0 D5NFU1.1 D5NFU1_9BURK DNA polymerase III, alpha subunit 1530 0.0 >D8IQD8.1 D8IQD8_HERSS DNA polymerase III (Alpha chain) protein EC=2.7.7.7 Length = 1152 Score = 2328 bits (6032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1134/1135 (99%), Positives = 1135/1135 (100%) Query: 1 VDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDAD 60 VDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDAD Sbjct: 18 VDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDAD 77 Query: 61 REKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALS 120 REKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALS Sbjct: 78 REKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALS 137 Query: 121 GAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKL 180 GAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKL Sbjct: 138 GAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKL 197 Query: 181 GLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFAD 240 GLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFAD Sbjct: 198 GLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFAD 257 Query: 241 LPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNE 300 LPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNE Sbjct: 258 LPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNE 317 Query: 301 AEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA 360 AEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA Sbjct: 318 AEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA 377 Query: 361 YCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA 420 YCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA Sbjct: 378 YCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA 437 Query: 421 TFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEE 480 TFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEE Sbjct: 438 TFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEE 497 Query: 481 EVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV 540 EVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV Sbjct: 498 EVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV 557 Query: 541 GLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQL 600 GLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQL Sbjct: 558 GLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQL 617 Query: 601 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEAFDYPDPRTEGILSE 660 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEAFDYPDPRTEGILSE Sbjct: 618 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEAFDYPDPRTEGILSE 677 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA Sbjct: 678 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 737 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI Sbjct: 738 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 797 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLGAVKGAGQNAIEAILEAR 840 LIEDAIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLGAVKGAGQNAIEAILEAR Sbjct: 798 LIEDAIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLGAVKGAGQNAIEAILEAR 857 Query: 841 KSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAEK 900 KSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAEK Sbjct: 858 KSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAEK 917 Query: 901 SANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRFV 960 SANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRFV Sbjct: 918 SANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRFV 977 Query: 961 RTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKHI 1020 RTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKH+ Sbjct: 978 RTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKHL 1037 Query: 1021 IKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDTL 1080 IKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDTL Sbjct: 1038 IKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDTL 1097 Query: 1081 SAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1135 SAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY Sbjct: 1098 SAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1152 >A6SVC7.1 A6SVC7_JANMA DNA polymerase III alpha subunit Length = 1152 Score = 1805 bits (4676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 865/1135 (76%), Positives = 990/1135 (87%), Gaps = 1/1135 (0%) Query: 1 VDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDAD 60 VDGL+RIDD+++AAA D Q ALA++DLANLF MV+FYKEAR G+KPI GCD+WI+ND D Sbjct: 18 VDGLIRIDDVIQAAAADMQPALAISDLANLFGMVKFYKEARSNGIKPIVGCDVWISNDND 77 Query: 61 REKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALS 120 R+KP RLL+L+KN+ GYLQLCE+LS+AWL N ++GRAE+R EWL+ + +G NGLI LS Sbjct: 78 RDKPSRLLLLVKNKDGYLQLCELLSKAWLTNLHRGRAEIRPEWLEQV-AADGKNGLIVLS 136 Query: 121 GAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKL 180 GA GD+G AIDNGNL AE CA+RWAE+FPG FY+E+QRAGQ NM+ VRQ+ L AKL Sbjct: 137 GAHFGDVGIAIDNGNLGAAERCAQRWAELFPGHFYIEVQRAGQPNMDGHVRQASVLAAKL 196 Query: 181 GLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFAD 240 GLP VATHP+QF EEF AHEARTCI+EGEI+AN RR++RFNEQQ FK+QAEM ELFAD Sbjct: 197 GLPLVATHPVQFLGLEEFTAHEARTCISEGEILANPRRIKRFNEQQRFKTQAEMAELFAD 256 Query: 241 LPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNE 300 +P A+ N+VEIAKRCNLVL+LGKP+LP+FPTPDG +ID+FLV + + GL+ R++ L+P+ Sbjct: 257 MPNALQNSVEIAKRCNLVLELGKPKLPNFPTPDGSSIDEFLVKEAQRGLDQRMEHLYPDP 316 Query: 301 AEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA 360 A REK R RY+ARL+FE +TIIKM FPGYFLIVADFI+WAKNNGVPVGPGRGSGAGSLVA Sbjct: 317 AAREKHRERYQARLKFETDTIIKMGFPGYFLIVADFIKWAKNNGVPVGPGRGSGAGSLVA 376 Query: 361 YCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA 420 Y LLITDLDPL+YNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKD+YGK+AVSQIA Sbjct: 377 YSLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDQYGKDAVSQIA 436 Query: 421 TFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEE 480 TFGTMAAKGAVRDVGRVLD GYNFCDGISKLIPFKPGKLVT++DAI+EEPLL ERLENEE Sbjct: 437 TFGTMAAKGAVRDVGRVLDFGYNFCDGISKLIPFKPGKLVTISDAIKEEPLLAERLENEE 496 Query: 481 EVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV 540 EVKQL+ LAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGD+GVVSQYDKDDVEAV Sbjct: 497 EVKQLLDLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDAGVVSQYDKDDVEAV 556 Query: 541 GLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQL 600 GLVKFDFLGLTTLTILDRAVRYI+ LDPAMADF L KLPL+DRPSYELLTKAKTVAVFQL Sbjct: 557 GLVKFDFLGLTTLTILDRAVRYIKDLDPAMADFALEKLPLNDRPSYELLTKAKTVAVFQL 616 Query: 601 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEAFDYPDPRTEGILSE 660 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKHGE F+YPDPRTE ILSE Sbjct: 617 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKHGERFEYPDPRTESILSE 676 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMA+HRELFR GA+KN L Sbjct: 677 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAEHRELFRAGASKNDLSAE 736 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHAAAYALLSY+TAYLKAHHPAAFMAANLSLAM+DTDK+KI Sbjct: 737 KADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAFMAANLSLAMDDTDKIKI 796 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLGAVKGAGQNAIEAILEAR 840 L+EDAIDIC L++LPPDIN+SDYRF PVG PGKKATQIRYGLGAVKG+G+ AI+A++EAR Sbjct: 797 LVEDAIDICGLSLLPPDINQSDYRFTPVGVPGKKATQIRYGLGAVKGSGKGAIDAVIEAR 856 Query: 841 KSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAEK 900 K PF DLFDFAKRVDK+QINRRTIDSLIRAGAFDCF VDRA+L ASV A E AEQAE Sbjct: 857 KERPFTDLFDFAKRVDKRQINRRTIDSLIRAGAFDCFDVDRAILLASVAFAMECAEQAEA 916 Query: 901 SANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRFV 960 +ANQVSLFGGDDSDLE P EYV+V PWSDKQ+LTEEK ALGFYLSGHLF+AY E RRF Sbjct: 917 AANQVSLFGGDDSDLETPPEYVKVSPWSDKQKLTEEKAALGFYLSGHLFNAYADEARRFA 976 Query: 961 RTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKHI 1020 R K++SLEPS EPR++AG+I+G+R QMTQRG++ I TLDDG+ ++ T+YNEL++ +H+ Sbjct: 977 RAKLSSLEPSREPRTIAGVISGLRTQMTQRGRITIVTLDDGSATVDVTVYNELYDANRHM 1036 Query: 1021 IKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDTL 1080 KEDE L V+GKVSEDRF+GGLR+ A+KVMD+ RIQY + +S+ + D N L+ TL Sbjct: 1037 FKEDEFLAVTGKVSEDRFSGGLRITAEKVMDIAGVRIQYANCVRLSLPASTDINVLKATL 1096 Query: 1081 SAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1135 + G P V++YQ E+ + WRINP D+++ L+ + + V + Y Sbjct: 1097 QPAARADGSPVVIQYQNPKGVSELCFAEQWRINPDDNIKQKLIDLYSDKNVQIAY 1151 >A4G2D5.1 A4G2D5_HERAR DNA polymerase III, alpha subunit EC=2.7.7.7 Length = 1153 Score = 1793 bits (4645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 859/1135 (75%), Positives = 983/1135 (86%) Query: 1 VDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDAD 60 VDGLVRIDD++ AAA D Q +LA+TDLANLF MV+FYKEAR KG+KPI GCD+WI+ND D Sbjct: 18 VDGLVRIDDVIAAAAADAQPSLAITDLANLFGMVKFYKEARSKGIKPIVGCDVWISNDND 77 Query: 61 REKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALS 120 R+KP RLL+L+KN+ GYLQLCE+LS+AWL N ++GRAE+R EWL+ L + NGLI LS Sbjct: 78 RDKPSRLLLLVKNKTGYLQLCELLSKAWLTNLHRGRAEIRPEWLEQLAAEGKPNGLIVLS 137 Query: 121 GAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKL 180 GA GDIG AIDNGNLA AE A+RWA++FPG FY+E+QRA Q NM+ VRQ+ L AKL Sbjct: 138 GAHFGDIGMAIDNGNLAAAERHAKRWADMFPGHFYIEVQRAEQPNMDAHVRQASVLAAKL 197 Query: 181 GLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFAD 240 LP VATHP+QF EF AHEARTCI+EGEI+AN RR++RFNE+Q F +QAEM ELFAD Sbjct: 198 NLPLVATHPVQFLDQNEFTAHEARTCISEGEILANPRRIKRFNERQRFTTQAEMAELFAD 257 Query: 241 LPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNE 300 +P A+ N+VEIAKRCNL+L+LGKP+LP+FPTPDG +ID+FLV + + GLE RL+ L+P+ Sbjct: 258 MPNALQNSVEIAKRCNLMLELGKPKLPNFPTPDGSSIDEFLVKEAQRGLEGRLQHLYPDP 317 Query: 301 AEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA 360 +REK R RY+ARL+FE +TII M FPGYFLIVADFI+WAKNNGVPVGPGRGSGAGSLVA Sbjct: 318 EQREKNRERYQARLKFETDTIIHMGFPGYFLIVADFIKWAKNNGVPVGPGRGSGAGSLVA 377 Query: 361 YCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA 420 Y LLITDLDPL+YNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKD+YGK+AVSQIA Sbjct: 378 YSLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDQYGKDAVSQIA 437 Query: 421 TFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEE 480 TFGTMAAKGAVRDVGRVLD GYNFCDGISKLIPFKPGKLVT+ADAI+EEPLL ERLENEE Sbjct: 438 TFGTMAAKGAVRDVGRVLDFGYNFCDGISKLIPFKPGKLVTIADAIKEEPLLAERLENEE 497 Query: 481 EVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV 540 EVKQL+ LAQ+VEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV Sbjct: 498 EVKQLLELAQKVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV 557 Query: 541 GLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQL 600 GLVKFDFLGLTTLTILDRAVRYI+ LDPAMADF L KLPL+DRPSY+LLTKAKTVAVFQL Sbjct: 558 GLVKFDFLGLTTLTILDRAVRYIKDLDPAMADFSLEKLPLNDRPSYDLLTKAKTVAVFQL 617 Query: 601 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEAFDYPDPRTEGILSE 660 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKHGE F+YPDPRTE ILSE Sbjct: 618 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKHGERFEYPDPRTEAILSE 677 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMA+HRELFR GAAKN L Sbjct: 678 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAQHRELFRAGAAKNDLSAE 737 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHAAAYALLSY+TAYLKAHHPAAFMAANLSLAM+DTDK+KI Sbjct: 738 KADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAFMAANLSLAMDDTDKIKI 797 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLGAVKGAGQNAIEAILEAR 840 L+ED +D+C L +LPPDIN+SDYRF PVG PGKKATQIRYGLGAVKG+G+ AI+AI+ AR Sbjct: 798 LVEDTLDVCGLTLLPPDINQSDYRFTPVGVPGKKATQIRYGLGAVKGSGKGAIDAIVNAR 857 Query: 841 KSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAEK 900 + PF DLFDF KRVDK+QINRRTIDSLIRAGAFDCF +DRAVL ASV A E AEQAE Sbjct: 858 QGKPFVDLFDFCKRVDKRQINRRTIDSLIRAGAFDCFNIDRAVLLASVGFAMECAEQAEA 917 Query: 901 SANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRFV 960 SANQVSLFGGDDSD+E P EYV+ PWSDKQ+LTEEK ALGFYLSGHLF AY +EVRRF Sbjct: 918 SANQVSLFGGDDSDMETPPEYVKASPWSDKQKLTEEKAALGFYLSGHLFDAYAEEVRRFA 977 Query: 961 RTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKHI 1020 RTK+++LEPS EPR++AG+I+GVR QMTQRG+++I TLDDG+ ++ T+YNE+F+ +++ Sbjct: 978 RTKLSNLEPSREPRTIAGVISGVRTQMTQRGRMIIVTLDDGSATVDVTVYNEVFDANRNL 1037 Query: 1021 IKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDTL 1080 KEDE L VSGK+SEDRF+GGLR+ A+KVMD+ A RIQY + +S+ + D N L TL Sbjct: 1038 FKEDEFLAVSGKISEDRFSGGLRITAEKVMDIAAVRIQYAKCIYLSLQASADVNTLMATL 1097 Query: 1081 SAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1135 A + G P V++YQ E+ + WRINP D+ + L+ + ++ V + Y Sbjct: 1098 QAAARADGSPVVIQYQNQKGVSELRFAEQWRINPDDNTKQKLIDLYSEKNVQIAY 1152 >F1W087.1 F1W087_9BURK DNA polymerase III alpha subunit Length = 1177 Score = 1778 bits (4605), Expect = 0.0, Method: Compositional matrix adjust. Identities = 865/1135 (76%), Positives = 992/1135 (87%), Gaps = 3/1135 (0%) Query: 1 VDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDAD 60 VDGL+RIDD+V AAA D Q +LA+TDLANLF MV+FYK AR KG+KPI GCD+WITND D Sbjct: 45 VDGLIRIDDVVDAAAADSQPSLAITDLANLFGMVKFYKAARKKGIKPIIGCDVWITNDDD 104 Query: 61 REKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALS 120 R+KP RLL+L KN GYLQLCE++SQAWL+N ++GRAE+R EWL+ L NGLIAL+ Sbjct: 105 RDKPSRLLLLAKNAAGYLQLCELISQAWLSNLHRGRAEIRTEWLEKL---SPANGLIALA 161 Query: 121 GAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKL 180 GA GD+G AI+NGNL AE A+RW+ IFPG FY+E+QRAGQ N E QVRQ VAL A+L Sbjct: 162 GAHFGDVGIAIENGNLPAAERNAQRWSRIFPGHFYIEIQRAGQPNQEAQVRQLVALAARL 221 Query: 181 GLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFAD 240 LP VATHPIQF + EEFIAHEARTCI+EGE++AN+RRVRRFN++Q F +QAEM LFAD Sbjct: 222 QLPVVATHPIQFLTKEEFIAHEARTCISEGEMLANSRRVRRFNDRQCFTTQAEMAGLFAD 281 Query: 241 LPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNE 300 LP A+ N+ EIAKRCNL LQLGKP+LPDFPTP+GMTI DFLVA+ ++GLE RL +L+P+E Sbjct: 282 LPAALQNSNEIAKRCNLTLQLGKPRLPDFPTPEGMTIGDFLVAEARSGLERRLLQLYPDE 341 Query: 301 AEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA 360 +RE +R RY RL+FE NTIIKM FPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA Sbjct: 342 TKREAERQRYADRLDFETNTIIKMGFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA 401 Query: 361 YCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA 420 Y L ITDLDPL YNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA Sbjct: 402 YSLSITDLDPLEYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA 461 Query: 421 TFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEE 480 TFGTMAAKGA+RDVGRVLD+GYNFCDGISKLIPFKPGK VT+ADAI EEPLL ER ENE+ Sbjct: 462 TFGTMAAKGAIRDVGRVLDMGYNFCDGISKLIPFKPGKQVTIADAILEEPLLAERQENED 521 Query: 481 EVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV 540 EV+QL+ LAQQVEGIARNIGMHAGGV+IAPGKLTDFCPLYTQGGD+GVVSQYDKDDVEAV Sbjct: 522 EVRQLLDLAQQVEGIARNIGMHAGGVVIAPGKLTDFCPLYTQGGDAGVVSQYDKDDVEAV 581 Query: 541 GLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQL 600 GLVKFDFLGLTTLTILD AVRYI+ LDPAMADF L KLPL+D+ SY+LLTKAKTVAVFQL Sbjct: 582 GLVKFDFLGLTTLTILDWAVRYIKRLDPAMADFSLEKLPLNDKASYDLLTKAKTVAVFQL 641 Query: 601 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEAFDYPDPRTEGILSE 660 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKHGE FDYPDPRTEGILSE Sbjct: 642 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKHGERFDYPDPRTEGILSE 701 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQV+GGYSLGGADLLRRAMGKKKAEEMA+HR++FR+GAAK+GL +A Sbjct: 702 TYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEMAEHRQIFRDGAAKDGLSEA 761 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHAAAYALL+Y+TAYLKAHHPAAFMAANLSLAM+DT+K++I Sbjct: 762 KADEIFDLMEKFAGYGFNKSHAAAYALLAYHTAYLKAHHPAAFMAANLSLAMDDTEKIRI 821 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEPGKKATQIRYGLGAVKGAGQNAIEAILEAR 840 L+ED ID+C + +LPPDIN+SDYRF PVGEPGK+A QIRYGLGAVKG+GQ AIEAI+ AR Sbjct: 822 LVEDVIDVCAMTLLPPDINQSDYRFTPVGEPGKRAKQIRYGLGAVKGSGQGAIEAIVAAR 881 Query: 841 KSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAEK 900 SGPF DLFDFAKRVDK+Q+NRRT+DSLIRAGAFDCF+VDRAVL ASV LA E+AEQ E Sbjct: 882 ASGPFTDLFDFAKRVDKRQVNRRTVDSLIRAGAFDCFEVDRAVLLASVALALEAAEQHEA 941 Query: 901 SANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRFV 960 S NQVSLFGGDDSDL+ EY++V PW+DKQRLTEEK ALGFYLSGHLF++Y +EVRRF Sbjct: 942 SINQVSLFGGDDSDLDTQPEYLKVAPWTDKQRLTEEKTALGFYLSGHLFNSYAEEVRRFA 1001 Query: 961 RTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKHI 1020 RTK++SLEPS +PR +AGII +RVQMTQRGK+VI TLDD + ++ T+YNE+++ K + Sbjct: 1002 RTKLSSLEPSRDPRMIAGIIVSLRVQMTQRGKMVIVTLDDSSATVDVTVYNEIYDANKRM 1061 Query: 1021 IKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDTL 1080 KEDE L VSGKVSEDRF+GGLR+ A+KVMD+ AARIQYG ++ ++ + +D ++ L Sbjct: 1062 FKEDEFLCVSGKVSEDRFSGGLRITAEKVMDIAAARIQYGKQITLAHSGKLDAAQIKTLL 1121 Query: 1081 SAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1135 + +R E GLPF++RY QA A CE+ L D W++ P+D L+ L G+E V EY Sbjct: 1122 TPYRSEAGLPFLLRYTQAGAECELRLADEWKVLPADGLKQALAEKMGRECVEFEY 1176 >C3X1A7.1 C3X1A7_OXAFO DNA polymerase III Length = 1153 Score = 1626 bits (4210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 792/1136 (69%), Positives = 932/1136 (82%), Gaps = 5/1136 (0%) Query: 1 VDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDAD 60 VDGLVRIDD+V AAAKDGQ ALA+TDL+NLF +++FYK AR KGVKPIAGCD+WITND D Sbjct: 18 VDGLVRIDDVVGAAAKDGQPALALTDLSNLFGLIKFYKAARKKGVKPIAGCDVWITNDVD 77 Query: 61 REKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALS 120 REKP RLL+L+K+R GYL LCE+LS+AWL NQY+GRAE+R+EWL+ L ++ GLIALS Sbjct: 78 REKPSRLLLLVKDRRGYLNLCELLSRAWLENQYRGRAEIRIEWLEELARRDSETGLIALS 137 Query: 121 GAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKL 180 GA GDIG A+D+ A+ CA RWA IFPG FY+E+QR GQ ME VRQ+ L KL Sbjct: 138 GAKQGDIGMALDSTGFENAKKCALRWAGIFPGNFYIEIQRTGQLGMEQYVRQAAELAEKL 197 Query: 181 GLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFAD 240 LP VATHP+QF SP++F AHEARTCI+EGE+++N +R R FNE Q F SQ EM +LFAD Sbjct: 198 QLPVVATHPVQFLSPDQFRAHEARTCISEGEVLSNKKRARLFNEHQCFLSQTEMAQLFAD 257 Query: 241 LPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNE 300 LPGA+ N VEIA+RCNLVL+LG +LP FPTPDGMT+D+FL ++ + GLE RL+ LFP+E Sbjct: 258 LPGALQNAVEIARRCNLVLELGHHKLPLFPTPDGMTLDEFLESEARHGLEKRLEVLFPDE 317 Query: 301 AEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA 360 ER+ +RP Y+ RL +E TII M F GYFLIVADFI+WAKNNGVPVGPGRGSGAGSLVA Sbjct: 318 EERKARRPVYDERLNYEIQTIINMGFSGYFLIVADFIRWAKNNGVPVGPGRGSGAGSLVA 377 Query: 361 YCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA 420 Y LLIT+LDP+ YNL+FERFLNPERVSMPDFDIDFCQ GRDRVIQYVK+RYGK+AVSQIA Sbjct: 378 YSLLITNLDPIAYNLIFERFLNPERVSMPDFDIDFCQHGRDRVIQYVKERYGKDAVSQIA 437 Query: 421 TFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEE 480 TFGTMAAK AVRDVGRVLDLGYNFCDGISKLIPFKPGK VT+ADA +EEPLL ER ++EE Sbjct: 438 TFGTMAAKAAVRDVGRVLDLGYNFCDGISKLIPFKPGKQVTIADAKKEEPLLAEREQSEE 497 Query: 481 EVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV 540 EVKQL+GLA+QVEGI RN+GMHAGGVLIAPGKLTDFCPLYTQ G+SGVVSQ+DK DVE + Sbjct: 498 EVKQLLGLAEQVEGITRNVGMHAGGVLIAPGKLTDFCPLYTQDGESGVVSQFDKKDVEEI 557 Query: 541 GLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQL 600 GLVKFDFLGLTTLTILD AV+YI LDPAM+ F+L +PL+D+ +++LLT+AKTVAVFQL Sbjct: 558 GLVKFDFLGLTTLTILDLAVKYIHQLDPAMSGFELDTIPLNDKETFDLLTRAKTVAVFQL 617 Query: 601 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEAFDYPDPRTEGILSE 660 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFC+RKHGEAF+YPD R + ILSE Sbjct: 618 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKHGEAFEYPDERAKDILSE 677 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIM+YQEQVMQMAQVIGGY+LGGADLLRRAMGKK A EMA+HR++FR+GAAKN L +A Sbjct: 678 TYGIMIYQEQVMQMAQVIGGYTLGGADLLRRAMGKKDAAEMARHRQIFRDGAAKNNLPEA 737 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHA AYALLSY TAYLK HH AAFMAAN+SLAM+DTDKV++ Sbjct: 738 KADEIFDLMEKFAGYGFNKSHATAYALLSYQTAYLKKHHAAAFMAANMSLAMDDTDKVRV 797 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEP----GKKATQIRYGLGAVKGAGQNAIEAI 836 L+EDA+D+C L ILPPDIN SD+ F PVGEP K TQIRYGLGAVKG+G++AIEAI Sbjct: 798 LVEDAVDVCGLEILPPDINSSDFYFKPVGEPPSVSKKPVTQIRYGLGAVKGSGESAIEAI 857 Query: 837 LEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAE 896 ++ARK PF+DLFDF RVDK+QINRRTI+SLIRAGAFDCFK DRAVL ASV LA E+AE Sbjct: 858 VQARKERPFRDLFDFCVRVDKRQINRRTIESLIRAGAFDCFKEDRAVLLASVGLAIEAAE 917 Query: 897 QAEKSANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEV 956 QAE SANQVSLFG +D+ L A +EYV+VP W++K RLTEEKG LGF LSGHLF AY E Sbjct: 918 QAEASANQVSLFGEEDTVLNA-VEYVRVPHWTEKSRLTEEKGVLGFCLSGHLFHAYAGEA 976 Query: 957 RRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEP 1016 R+F +++I+ LE S EPR +AGI+ G R QM+QRGK+++ +LDDG+ IE T+++EL E Sbjct: 977 RQFAKSRISELEASREPRWVAGIVAGTRAQMSQRGKMMVVSLDDGSATIEVTVFSELLEQ 1036 Query: 1017 FKHIIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHL 1076 + I +EDE L V GKVSEDRF+GGLR+ AD +D+ R+ +G M + + + L Sbjct: 1037 KRAIFREDEFLAVFGKVSEDRFSGGLRLNADDALDITEVRLHFGRHMAFDLPERFSVSAL 1096 Query: 1077 RDTLSAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVV 1132 ++ LSA+ G+ Y C + G WRI P D + L F VV Sbjct: 1097 KEILSAYVDGNGMHLRTDYVSCGNRCLIDFGTNWRILPKDECLNKLAQHFQNVRVV 1152 >C3X7L4.1 C3X7L4_OXAFO DNA polymerase III alpha subunit Length = 1153 Score = 1624 bits (4205), Expect = 0.0, Method: Compositional matrix adjust. Identities = 790/1130 (69%), Positives = 938/1130 (83%), Gaps = 5/1130 (0%) Query: 1 VDGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDAD 60 VDGLVRI+D++ AAAKDGQ A+A+TDLANLF +++FYK AR KGVKPI GCD+WITNDAD Sbjct: 18 VDGLVRIEDVIAAAAKDGQPAMALTDLANLFGLIKFYKAARKKGVKPIGGCDVWITNDAD 77 Query: 61 REKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALS 120 REKP RLL+L+K+R GYL LCE+LS++WL NQ++GRAE+R+EWL+ L + G GLIALS Sbjct: 78 REKPSRLLLLVKDRTGYLNLCELLSRSWLENQWRGRAEIRIEWLEELSKKTGDMGLIALS 137 Query: 121 GAAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKL 180 GA GDIG A + AE CARRWA IFP FY+E+QR G + ME +R +V L KL Sbjct: 138 GAKQGDIGMAFEASGFDNAEKCARRWASIFPDNFYIEIQRTGHSGMEQYLRHAVELADKL 197 Query: 181 GLPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFAD 240 LP VATHP+QF S EEF AHEARTCI+EGEI++N RR FNE+QYF +Q EM ELFAD Sbjct: 198 QLPVVATHPVQFLSQEEFAAHEARTCISEGEILSNKRRAHNFNERQYFYTQEEMAELFAD 257 Query: 241 LPGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNE 300 LPGA+ N+VEIA+RCNLVL+LG +LP+FPTPDGMT+D+FL ++ K GLE RL+ELFP+E Sbjct: 258 LPGAIQNSVEIARRCNLVLELGHHKLPEFPTPDGMTLDEFLTSEAKHGLEKRLEELFPDE 317 Query: 301 AEREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVA 360 ER+ QRPRY+ RL++E TII M F GYFLIVADFI+WAKNNGVPVGPGRGSGAGSLVA Sbjct: 318 EERKTQRPRYDERLDYEIGTIINMGFSGYFLIVADFIRWAKNNGVPVGPGRGSGAGSLVA 377 Query: 361 YCLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIA 420 Y LLIT+LDPL YNL+FERFLNPERVSMPDFD+DFCQ GRD+VIQYVKDRYGK+AVSQIA Sbjct: 378 YSLLITNLDPLAYNLIFERFLNPERVSMPDFDVDFCQHGRDKVIQYVKDRYGKDAVSQIA 437 Query: 421 TFGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEE 480 TFGTMAAK AVRDVGRVLDLGYNFCDGISKLIPFKPGK VT+A+A +EEPLL ER E+EE Sbjct: 438 TFGTMAAKAAVRDVGRVLDLGYNFCDGISKLIPFKPGKQVTIAEAKKEEPLLAEREESEE 497 Query: 481 EVKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAV 540 EVKQL+ LA+QVEGI RN+GMHAGGVLIAPGKLTDFCPLYTQGG++GVVS +DK DVEAV Sbjct: 498 EVKQLLALAEQVEGITRNVGMHAGGVLIAPGKLTDFCPLYTQGGEAGVVSHFDKSDVEAV 557 Query: 541 GLVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQL 600 GLVKFDFLGLTTLTILD AV+YIR LDP MA+F+L +PLDD+ +Y+LL KAKTVAVFQL Sbjct: 558 GLVKFDFLGLTTLTILDLAVKYIRQLDPEMANFNLDTIPLDDKATYDLLIKAKTVAVFQL 617 Query: 601 ESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEAFDYPDPRTEGILSE 660 ESRGMQGMLKDA+PDRFEDIIALVALYRPGPMDLIPDFC+RKHGE F+YPD RT+GILSE Sbjct: 618 ESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPDFCRRKHGEKFEYPDERTKGILSE 677 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQVIGGY+LGGADLLRRAMGKK A EMA+HR++FR+GAAKN L +A Sbjct: 678 TYGIMVYQEQVMQMAQVIGGYTLGGADLLRRAMGKKDANEMARHRQIFRDGAAKNDLTEA 737 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHAAAYALLSY TA+LK HH AAFMAAN+SLAM+DTDKVK+ Sbjct: 738 KADEIFDLMEKFAGYGFNKSHAAAYALLSYQTAFLKQHHAAAFMAANMSLAMDDTDKVKV 797 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGE----PGKKATQIRYGLGAVKGAGQNAIEAI 836 L+EDA+++C L ILPPDIN S+Y F PVGE K + IRYGLGAVKG+G++AIEAI Sbjct: 798 LVEDAVEVCGLTILPPDINHSEYYFTPVGEAPSVSKKPVSAIRYGLGAVKGSGESAIEAI 857 Query: 837 LEARKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAE 896 ++ARK PF DLFDF RVDK QINRRTI+SLIRAGAFDCF VDRAVL ASV+LA E+AE Sbjct: 858 VKARKERPFTDLFDFCMRVDKHQINRRTIESLIRAGAFDCFNVDRAVLLASVDLAIEAAE 917 Query: 897 QAEKSANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEV 956 QAE SANQVSLFG +++ + +EYVQVP W++K +LTEEKG LGF LSGHLF+AY E Sbjct: 918 QAEASANQVSLFGEEEAVINT-VEYVQVPHWTEKHKLTEEKGVLGFCLSGHLFNAYAAEA 976 Query: 957 RRFVRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEP 1016 R+F +T+I LEPS +P+ +AG+I+G R QMTQRGK++I TLDDG+G IE TI++EL + Sbjct: 977 RQFAKTRIIELEPSRDPKWVAGVISGNRTQMTQRGKMMIVTLDDGSGTIEVTIFSELMDQ 1036 Query: 1017 FKHIIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHL 1076 + I KEDE L V GKVSEDRF+GGLR+ AD +D+ +R+ +G + ++ + + L Sbjct: 1037 KRPIFKEDEFLAVFGKVSEDRFSGGLRLNADDALDISGSRLHFGQHISFTLPEKFNLAKL 1096 Query: 1077 RDTLSAHRQEQGLPFVMRYQQADAACEVVLGDAWRINPSDSLQSTLVASF 1126 ++T++ + E G+ + Y C + G + P+D ++L F Sbjct: 1097 KETITPWQTEDGMQLIADYIVDGNKCRIDFGANCLLGPNDECLNSLSQQF 1146 >B2T257.1 B2T257_BURPP DNA polymerase III, alpha subunit EC=2.7.7.7 Length = 1192 Score = 1536 bits (3978), Expect = 0.0, Method: Compositional matrix adjust. Identities = 779/1178 (66%), Positives = 912/1178 (77%), Gaps = 51/1178 (4%) Query: 2 DGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDADR 61 DG+VR+DDIVKAAAKDGQ ALA+TDL N F +VRFYKEARGKGVKPIAGCD+WITN DR Sbjct: 22 DGIVRLDDIVKAAAKDGQGALALTDLGNAFGLVRFYKEARGKGVKPIAGCDVWITNPDDR 81 Query: 62 EKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALSG 121 +KP RLL+L+K+R GYL LCE+LS+A L NQY+GRAEV WL++ G GL+ALSG Sbjct: 82 DKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEVEAGWLESGL----GEGLLALSG 137 Query: 122 AAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKLG 181 A GD+G A+ GN A+ A WA++FPG FY+ELQR+GQ E V+Q+VAL A L Sbjct: 138 AQQGDVGLALAAGNEEAAKRNALHWAKVFPGGFYIELQRSGQPGGEQYVQQAVALAASLK 197 Query: 182 LPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFADL 241 LP VATHP+QF +P++F AHEAR CI+EG+I+AN RR +RF +QYF++Q EM LFAD+ Sbjct: 198 LPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRSKRFTSEQYFRTQEEMAALFADI 257 Query: 242 PGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNEA 301 P A+AN+VEIAKRCNL L+LGKP+LP FPTPDGM++DD+LV +K GLE RL++L+P+ A Sbjct: 258 PSALANSVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQLSKEGLEKRLEQLYPDAA 317 Query: 302 EREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVAY 361 ERE QR Y ARLEFE TIIKM FPGYFLIVADFI WAKNNGVPVGPGRGSGAGSLVAY Sbjct: 318 EREAQRETYYARLEFECGTIIKMGFPGYFLIVADFINWAKNNGVPVGPGRGSGAGSLVAY 377 Query: 362 CLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIAT 421 L +TDLDPLRYNLLFERFLNPERVSMPDFDIDFCQ GRDRVIQYVK++YG +AVSQIAT Sbjct: 378 ALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYVKEKYGADAVSQIAT 437 Query: 422 FGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEEE 481 FGTMAAK AVRD+GRVLDLGY F DGI+KLIPFKPGK VT+ADA++EEPLL+ER +NE+E Sbjct: 438 FGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIADAMKEEPLLQERFDNEDE 497 Query: 482 VKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVG 541 V QL+ LAQ+VEG+ RN+GMHAGGVLIAPGKLTDFCPLYTQG +SGVVSQYDKDDVEAVG Sbjct: 498 VHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDESGVVSQYDKDDVEAVG 557 Query: 542 LVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQLE 601 LVKFDFLGLTTLTILD A RYIR LDP+ D+ L ++PLDD S+ +L KA TVAVFQLE Sbjct: 558 LVKFDFLGLTTLTILDWAERYIRRLDPSKQDWSLGQVPLDDPASFSILKKANTVAVFQLE 617 Query: 602 SRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHG-EAFDYPDPRTEGILSE 660 SRGMQGMLKDA+PDRFEDIIALVALYRPGPMDLIP FC RKHG E +YPDPR E +L E Sbjct: 618 SRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHGREVVEYPDPRVESVLRE 677 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQ+IGGYSLGGADLLRRAMGKKKAEEMA+HRELFR+GAAKNGL Sbjct: 678 TYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAEHRELFRQGAAKNGLTAE 737 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHAAAYALL+YYTA+LKAHHPA FMAAN+SLAM+DTDKVKI Sbjct: 738 KADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAANMSLAMDDTDKVKI 797 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEP-GKKATQIRYGLGAVKGAGQNAIEAILEA 839 L ED + K+A+LPPD+N S YRF PV EP GK++ IRYGLGA+KG+GQNAIE IL A Sbjct: 798 LFEDCL-ANKMAVLPPDVNLSAYRFEPVAEPDGKRSKTIRYGLGAIKGSGQNAIEEILRA 856 Query: 840 RKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAE 899 R+ GPF D+FDF RVD++ +NRRT+++LIRAGAFD +RA L ASV+LA E+AEQA Sbjct: 857 REEGPFIDIFDFCNRVDRRIVNRRTVEALIRAGAFDTLHANRAQLIASVSLAMEAAEQAS 916 Query: 900 KSANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRF 959 +A Q LF D+ + E V P W +K++L EEK ALGFYLSGHLF AY+ EVRRF Sbjct: 917 ANALQAGLFDMGDAPSQGH-ELVDEPEWPEKKKLQEEKAALGFYLSGHLFDAYKNEVRRF 975 Query: 960 VRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKH 1019 VR KI L+ + + +AG+I +R QMTQRGK++I LDDGTG E T++NE FE K Sbjct: 976 VRQKIGELKEGRD-KLVAGVIASLRTQMTQRGKMLIALLDDGTGQCEVTVFNETFEAHKQ 1034 Query: 1020 IIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDT 1079 + KEDELLVV G+ D F GG+R D VMDLG AR +Y + V +N D LR Sbjct: 1035 LFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKVQMNGNADALALRRV 1094 Query: 1080 LSAH--------------------------------------RQE----QGLPFVMRYQQ 1097 L AH RQ GL + Y+ Sbjct: 1095 LEAHSAGKDEPQAVAAPAASSRGGNGGNGGGRNGGGYGGGGQRQAVQIPNGLAVQVVYRS 1154 Query: 1098 ADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1135 +A E+ LGDAWR+ P+D L + L F ++ + Y Sbjct: 1155 QNAEGEMRLGDAWRVKPTDELLAALRGEFAGSSIEIVY 1192 >B2JE49.1 B2JE49_BURP8 DNA polymerase III, alpha subunit EC=2.7.7.7 Length = 1187 Score = 1532 bits (3966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 772/1173 (65%), Positives = 911/1173 (77%), Gaps = 46/1173 (3%) Query: 2 DGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDADR 61 DG+VRIDD+V AAAKDGQ ALA+TDL N F +VRFYKEARGKGVKPIAGCD+WITN DR Sbjct: 22 DGIVRIDDVVDAAAKDGQGALALTDLGNAFGLVRFYKEARGKGVKPIAGCDVWITNPDDR 81 Query: 62 EKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALSG 121 +KP RLL+L++N+ GYL LCE+LS+AWL NQY+GRAEV WL++ + GL+ALSG Sbjct: 82 DKPSRLLLLVRNKTGYLNLCELLSKAWLTNQYRGRAEVETAWLESGLAE----GLLALSG 137 Query: 122 AAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKLG 181 A GD+G A+ GN A+ A+RWA+IFP FY+ELQR GQA E V+Q+VAL A L Sbjct: 138 AQHGDVGLALAAGNQEAAQRNAQRWAQIFPNGFYIELQRGGQAGAEAYVQQAVALAASLK 197 Query: 182 LPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFADL 241 LP VATHP+QF +P++F AHEAR CI+EG+I+AN RR +RF QYF++Q EM+ L+AD+ Sbjct: 198 LPVVATHPLQFMTPDDFTAHEARVCISEGDILANPRRQKRFTTDQYFRTQDEMIALYADI 257 Query: 242 PGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNEA 301 P A+ANTVEIAKRCNL L+LGKP+LP FPTPDGM++DD+LV +K GLE RL++LFP +A Sbjct: 258 PSAIANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQLSKEGLEKRLEQLFPEQA 317 Query: 302 EREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVAY 361 ER+ QR Y ARL+FE TIIKM FPGYFLIVADFI WAKNNGVPVGPGRGSGAGSLVAY Sbjct: 318 ERDAQREGYYARLDFECGTIIKMGFPGYFLIVADFINWAKNNGVPVGPGRGSGAGSLVAY 377 Query: 362 CLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIAT 421 L ITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQ GRDRVIQYVK++YG +AVSQIAT Sbjct: 378 ALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYVKEKYGADAVSQIAT 437 Query: 422 FGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEEE 481 FGTMAAK AVRD+GRVLDLGY F DG++KLIPFKPGK VT+ADA++EEPLLKER +NE+E Sbjct: 438 FGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMKEEPLLKERFDNEDE 497 Query: 482 VKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVG 541 V QL+ LAQ+VEG+ RN+GMHAGGVLIAPGKLTDFCPLYTQG +SGVVSQYDKDDVEAVG Sbjct: 498 VHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDESGVVSQYDKDDVEAVG 557 Query: 542 LVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQLE 601 LVKFDFLGLTTLTILD A RYIR LDP+ ++ LA++PLDD ++ +L KA TVAVFQLE Sbjct: 558 LVKFDFLGLTTLTILDWAERYIRRLDPSKENWSLAQVPLDDPAAFSILKKANTVAVFQLE 617 Query: 602 SRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHG-EAFDYPDPRTEGILSE 660 SRGMQGMLKDA+PDRFEDIIALVALYRPGPMDLIP FC RKHG E +YPDPR E +L E Sbjct: 618 SRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHGRETVEYPDPRVEPVLKE 677 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQ+IGGYSLGGADLLRRAMGKKK EEMAKHRE+F EGAA+NGL + Sbjct: 678 TYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHREIFAEGAARNGLTRE 737 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADE FDLMEKFAGYGFNKSHAAAYALL+Y+TA+LKAHHPA FMAAN+SLAM+DTDKVKI Sbjct: 738 KADETFDLMEKFAGYGFNKSHAAAYALLAYHTAWLKAHHPAEFMAANMSLAMDDTDKVKI 797 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEP-GKKATQIRYGLGAVKGAGQNAIEAILEA 839 L ED + K+A+LPPDIN S YRF PV E GK++ IRYGLGA+KG+GQNAIE IL A Sbjct: 798 LFEDCL-ANKMAVLPPDINLSAYRFEPVAEADGKRSRTIRYGLGAIKGSGQNAIEEILRA 856 Query: 840 RKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAE 899 R+ GPF D+FDF R+D++ +NRRTI++LIRAGAFD +RA L ASV+LA E+A+QA Sbjct: 857 REEGPFVDIFDFCNRIDRRVVNRRTIEALIRAGAFDSLHENRAQLIASVSLAMEAADQAS 916 Query: 900 KSANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRF 959 +A Q LF D+ + E V P W DK+RL EEK ALGFYLSGHLF AY+ EVRRF Sbjct: 917 ANAMQAGLFDIGDAPSQGH-ELVDEPAWPDKRRLQEEKTALGFYLSGHLFDAYKDEVRRF 975 Query: 960 VRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKH 1019 VR KI L+ + + +AG+I +R QMTQRGK++I LDDGTG E T++NE FE K Sbjct: 976 VRQKIGELKEGRD-KLVAGVIVSLRTQMTQRGKMLIALLDDGTGQCEVTVFNEQFEAHKQ 1034 Query: 1020 IIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDT 1079 + KEDELLVV G+ D F GG+R D MDLG AR ++ + V +N + + LR Sbjct: 1035 LFKEDELLVVQGQARNDAFTGGIRFTVDTPMDLGRARTRFAQAVKVQMNGNANAHTLRSV 1094 Query: 1080 LSAHRQE-------------------------------------QGLPFVMRYQQADAAC 1102 L A+R + GL + Y+ +A Sbjct: 1095 LEAYRAKPEDAEVAAPAPRSGARGGFGGNGESGGRAQRPSAPIPNGLAVQIVYRSDNAEG 1154 Query: 1103 EVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1135 EV LGDAWR+ P+D L + L F A+ + Y Sbjct: 1155 EVRLGDAWRVKPTDELLAALRREFSGSAIEIVY 1187 >Q142P8.1 Q142P8_BURXL DNA polymerase III, alpha subunit EC=2.7.7.7 Length = 1193 Score = 1531 bits (3964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 777/1179 (65%), Positives = 911/1179 (77%), Gaps = 52/1179 (4%) Query: 2 DGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDADR 61 DG+VR+DD+VKAAAKDGQ ALA+TDL N F +VRFYKEARGKGVKPIAGCD+WITN DR Sbjct: 22 DGIVRLDDVVKAAAKDGQGALALTDLGNAFGLVRFYKEARGKGVKPIAGCDVWITNPDDR 81 Query: 62 EKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALSG 121 EKP RLL+L+K+R GYL LCE+LS+A L NQY+GRAE+ WL++ G GL+ALSG Sbjct: 82 EKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEIEAGWLESGL----GEGLLALSG 137 Query: 122 AAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKLG 181 A GDIG A+ GN A+ A WA++FPG FY+E+QR GQ E V+Q+VAL A L Sbjct: 138 AQQGDIGLALAAGNEEAAKRNALHWAKVFPGGFYIEVQRCGQPGGEHYVQQAVALAASLK 197 Query: 182 LPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFADL 241 LP VATHP+QF +P++F AHEAR CI+EG+I+AN RR +RF +QYF++Q EM LFAD+ Sbjct: 198 LPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRSKRFTPEQYFRTQEEMAALFADI 257 Query: 242 PGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNEA 301 P A+ N+VEIAKRCNL L+LGKP+LP FPTPDGM++DD+LV +K GLE RL++L+P+EA Sbjct: 258 PSALTNSVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVHLSKEGLEKRLEQLYPDEA 317 Query: 302 EREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVAY 361 ER QR Y RLEFE TIIKM FPGYFLIVADFI WAKNNGVPVGPGRGSGAGSLVAY Sbjct: 318 ERAAQRATYYERLEFECGTIIKMGFPGYFLIVADFINWAKNNGVPVGPGRGSGAGSLVAY 377 Query: 362 CLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIAT 421 L +TDLDPLRYNLLFERFLNPERVSMPDFDIDFCQ GRDRVIQYVK++YG +AVSQIAT Sbjct: 378 ALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYVKEKYGADAVSQIAT 437 Query: 422 FGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEEE 481 FGTMAAK AVRD+GRVLDLGY F DGI+KLIPFKPGK VT+ADA++EEPLL+ER +NE+E Sbjct: 438 FGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIADAMKEEPLLQERFDNEDE 497 Query: 482 VKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVG 541 V QL+ LAQ+VEG+ RN+GMHAGGVLIAPGKLTDFCPLYTQG +SGVVSQYDKDDVEAVG Sbjct: 498 VHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDESGVVSQYDKDDVEAVG 557 Query: 542 LVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQLE 601 LVKFDFLGLTTLTILD A RYIR LDP+ D+ LA++PLDD S+ +L KA TVAVFQLE Sbjct: 558 LVKFDFLGLTTLTILDWAERYIRRLDPSKQDWSLAQVPLDDPASFSILKKANTVAVFQLE 617 Query: 602 SRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHG-EAFDYPDPRTEGILSE 660 SRGMQGMLKDA+PDRFEDIIALVALYRPGPMDLIP FC RKHG E +YPDPR E +L E Sbjct: 618 SRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHGREVVEYPDPRVEPVLKE 677 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQ+IGGYSLGGADLLRRAMGKKKAEEMA+HRELFR+GAAKNGL Sbjct: 678 TYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAQHRELFRQGAAKNGLTGE 737 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHAAAYALL+YYTA+LKAHHPA FMAAN+SLAM+DTDKVKI Sbjct: 738 KADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAANMSLAMDDTDKVKI 797 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEP-GKKATQIRYGLGAVKGAGQNAIEAILEA 839 L ED + + K+A+LPPD+N S YRF PV EP GK++ IRYGLGA+KG+GQNAIE IL A Sbjct: 798 LFEDCL-VNKMAVLPPDVNLSAYRFEPVAEPDGKRSRTIRYGLGAIKGSGQNAIEEILRA 856 Query: 840 RKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAE 899 R+ GPF D+FDF RVD++ +NRRT+++LIRAGAFD +RA L ASV+LA E+AEQA Sbjct: 857 REEGPFIDIFDFCNRVDRRIVNRRTVEALIRAGAFDSLHANRAQLIASVSLAMEAAEQAS 916 Query: 900 KSANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRF 959 +A Q LF D+ + E V P W +K++L EEK ALGFYLSGHLF AY+ EVRRF Sbjct: 917 ANALQAGLFDMGDAPSQGH-ELVDEPEWPEKKKLQEEKAALGFYLSGHLFDAYKDEVRRF 975 Query: 960 VRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKH 1019 VR KI L+ + + +AG+I +R QMTQRGK++I LDDGTG E T++NE FE K Sbjct: 976 VRQKIGELKEGRD-KLVAGVIASLRTQMTQRGKMLIALLDDGTGQCEVTVFNETFEAHKQ 1034 Query: 1020 IIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDT 1079 + KEDELLVV G+ D F GG+R D VMDLG AR +Y + V +N D LR Sbjct: 1035 LFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKVQMNGNADALALRRV 1094 Query: 1080 LSAH---------------------------------------RQE----QGLPFVMRYQ 1096 L AH RQ GL + Y+ Sbjct: 1095 LEAHSAGKDEPQAAAAPAASSRGGNGGGNGGGRNGGGYGGGGQRQTVQIPNGLAVQVVYR 1154 Query: 1097 QADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1135 +A E+ LGDAWR+ P+D L + L F ++ + Y Sbjct: 1155 SQNAEGEMRLGDAWRVKPTDELLAALRGEFAGSSIEIVY 1193 >D5NFU1.1 D5NFU1_9BURK DNA polymerase III, alpha subunit Length = 1193 Score = 1530 bits (3962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 777/1179 (65%), Positives = 911/1179 (77%), Gaps = 52/1179 (4%) Query: 2 DGLVRIDDIVKAAAKDGQAALAVTDLANLFCMVRFYKEARGKGVKPIAGCDLWITNDADR 61 DG+VR+DD+VKAAAKDGQ ALA+TDL N F +VRFYKEARGKGVKPIAGCD+WITN DR Sbjct: 22 DGIVRLDDVVKAAAKDGQGALALTDLGNAFGLVRFYKEARGKGVKPIAGCDVWITNPDDR 81 Query: 62 EKPFRLLVLIKNRHGYLQLCEVLSQAWLNNQYKGRAEVRMEWLDALRHQEGGNGLIALSG 121 EKP RLL+L+K+R GYL LCE+LS+A L NQY+GRAE+ WL++ G GL+ALSG Sbjct: 82 EKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEIEAGWLESGL----GEGLLALSG 137 Query: 122 AAMGDIGQAIDNGNLAQAEACARRWAEIFPGAFYLELQRAGQANMEVQVRQSVALGAKLG 181 A GD+G A+ GN A+ A WA++FPG FY+E+QR GQ E V+Q+VAL A L Sbjct: 138 AQQGDVGLALAAGNEEAAKRNALHWAKVFPGGFYIEVQRCGQPGGEHYVQQAVALAASLK 197 Query: 182 LPCVATHPIQFQSPEEFIAHEARTCIAEGEIMANARRVRRFNEQQYFKSQAEMVELFADL 241 LP VATHP+QF +P++F AHEAR CI+EG+I+AN RR +RF +QYF++Q EM LFAD+ Sbjct: 198 LPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRSKRFTPEQYFRTQEEMAALFADI 257 Query: 242 PGAVANTVEIAKRCNLVLQLGKPQLPDFPTPDGMTIDDFLVAQTKAGLEVRLKELFPNEA 301 P A+AN+VEIAKRCNL L+LGKP+LP FPTPDGM++DD+LV +K GLE RL++L+P+ A Sbjct: 258 PSALANSVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVHLSKEGLEKRLEQLYPDAA 317 Query: 302 EREKQRPRYEARLEFENNTIIKMKFPGYFLIVADFIQWAKNNGVPVGPGRGSGAGSLVAY 361 ERE QR Y RLEFE TIIKM FPGYFLIVADFI WAKNNGVPVGPGRGSGAGSLVAY Sbjct: 318 EREAQRETYYQRLEFECGTIIKMGFPGYFLIVADFINWAKNNGVPVGPGRGSGAGSLVAY 377 Query: 362 CLLITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQEGRDRVIQYVKDRYGKEAVSQIAT 421 L +TDLDPLRYNLLFERFLNPERVSMPDFDIDFCQ GRDRVIQYVK++YG +AVSQIAT Sbjct: 378 ALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYVKEKYGADAVSQIAT 437 Query: 422 FGTMAAKGAVRDVGRVLDLGYNFCDGISKLIPFKPGKLVTLADAIEEEPLLKERLENEEE 481 FGTMAAK AVRD+GRVLDLGY F DGI+KLIPFKPGK VT+ADA++EEPLL+ER +NE+E Sbjct: 438 FGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIADAMKEEPLLQERFDNEDE 497 Query: 482 VKQLMGLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDSGVVSQYDKDDVEAVG 541 V QL+ LAQ+VEG+ RN+GMHAGGVLIAPGKLTDFCPLYTQG +SGVVSQYDKDDVEAVG Sbjct: 498 VHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDESGVVSQYDKDDVEAVG 557 Query: 542 LVKFDFLGLTTLTILDRAVRYIRMLDPAMADFDLAKLPLDDRPSYELLTKAKTVAVFQLE 601 LVKFDFLGLTTLTILD A RYIR LDP+ D+ LA++PLDD S+ +L KA TVAVFQLE Sbjct: 558 LVKFDFLGLTTLTILDWAERYIRRLDPSKQDWSLAQVPLDDPASFSILKKANTVAVFQLE 617 Query: 602 SRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHG-EAFDYPDPRTEGILSE 660 SRGMQGMLKDA+PDRFEDIIALVALYRPGPMDLIP FC RKHG E +YPDPR E +L E Sbjct: 618 SRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHGREVVEYPDPRVESVLKE 677 Query: 661 TYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAKHRELFREGAAKNGLDQA 720 TYGIMVYQEQVMQMAQ+IGGYSLGGADLLRRAMGKKKAEEMA+HRELFR+GAAKNGL Sbjct: 678 TYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAEHRELFRQGAAKNGLAGE 737 Query: 721 KADEIFDLMEKFAGYGFNKSHAAAYALLSYYTAYLKAHHPAAFMAANLSLAMEDTDKVKI 780 KADEIFDLMEKFAGYGFNKSHAAAYALL+YYTA+LKAHHPA FMAAN+SLAM+DTDKVKI Sbjct: 738 KADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAANMSLAMDDTDKVKI 797 Query: 781 LIEDAIDICKLAILPPDINKSDYRFMPVGEP-GKKATQIRYGLGAVKGAGQNAIEAILEA 839 L ED + + K+A+LPPD+N S YRF PV E GK++ IRYGLGA+KG+GQNAIE IL A Sbjct: 798 LFEDCL-VNKMAVLPPDVNLSAYRFEPVAEADGKRSRTIRYGLGAIKGSGQNAIEEILRA 856 Query: 840 RKSGPFKDLFDFAKRVDKKQINRRTIDSLIRAGAFDCFKVDRAVLQASVNLAWESAEQAE 899 R+ GPF D+FDF RVD++ +NRRT+++LIRAGAFD +RA L ASV+LA E+AEQA Sbjct: 857 REEGPFIDIFDFCNRVDRRIVNRRTVEALIRAGAFDTLHANRAQLIASVSLAMEAAEQAS 916 Query: 900 KSANQVSLFGGDDSDLEAPLEYVQVPPWSDKQRLTEEKGALGFYLSGHLFSAYEKEVRRF 959 +A Q LF DS + E V P W +K++L EEK ALGFYLSGHLF AY+ EVRRF Sbjct: 917 ANALQAGLFDMGDSPSQGH-ELVDEPEWPEKKKLQEEKAALGFYLSGHLFDAYKDEVRRF 975 Query: 960 VRTKIASLEPSWEPRSLAGIITGVRVQMTQRGKLVICTLDDGTGVIEATIYNELFEPFKH 1019 VR KI L+ + + +AG+I +R QMTQRGK++I LDDGTG E T++NE FE K Sbjct: 976 VRQKIGELKEGRD-KLVAGVIASLRTQMTQRGKMLIALLDDGTGQCEVTVFNETFEAHKQ 1034 Query: 1020 IIKEDELLVVSGKVSEDRFNGGLRVAADKVMDLGAARIQYGVRMVVSINKAIDPNHLRDT 1079 + KEDELLVV G+ D F GG+R D VMDLG AR +Y + V +N D LR Sbjct: 1035 LFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKVQMNGNADALALRRV 1094 Query: 1080 LSAH---------------------------------------RQE----QGLPFVMRYQ 1096 L AH RQ GL + Y+ Sbjct: 1095 LEAHSAGKDEPQAAAAPAASSRGGNGGGNGGGRNGGGYGGGGQRQAVQIPNGLAVQVVYR 1154 Query: 1097 QADAACEVVLGDAWRINPSDSLQSTLVASFGKEAVVVEY 1135 +A E+ LGDAWR+ P+D L + L F ++ + Y Sbjct: 1155 SQNAEGEMRLGDAWRVKPTDELLAALRGEFAGSSIEIVY 1193